Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->YAB1                                                                                        <---------YAB1                                                                               ------->GAMYB                                   <------ZmHOX2a(1)                          <------------AtMYB77                                  --------->At4g35610                   <---------HSFB2a(2)                                <-----------RAV1(2)        ------>ZmHOX2a(1)  <------------MYB.PH3(1)                       <------ZmHOX2a(1)               --------->ARR14(2)    <---------At5g28300                     --------->MYB59                   ------->TEIL     >>>>>>>ZML2   --------->YAB1< ------>TOE1(3)---------->DOF2<-----------HVH21        <---------ARR14(2)   <-----------GT1    <----- --->DOF2--------->HSFB2a(2)  <-----------TGA1        <---------CCA1(2) --------->HSFB2a(2) <--------   gcttaaaccttctctaacaaagttaggaaactcgtcaggagcattgttctctctctgtatcctcttgttctgttctagtaaccgtctctcatcataagga  22327100                                                                                                   --                                                                                                 ----                                                     --------->ANAC58                            ----                                               --------->ANAC46                          <---------ZAT2                                          ------->GAMYB   <---------MYB52(2)             --------->At4g35610 ----------DOF2                  ----------->GT1     --------->ANAC58                    --------->ZAT2 -ZmHOX2a(1)      <---------At4g35610    --------->MYB46(3)                              <---------At4g35610 -ICU4            --------->At4g35610    <---------MYB52(2)                       ------>NtERF2  <---   ctctttgatttagtcttcgcagatgaagacaacgctggtaacaacaaacacggcgaagcaactaaaacataaacaagacttctccgactcaagctgcaat  22327200                                            --------->AHL20(2)                                            --------->AHL20(1)                                            <---------AHL20(2)                             <---------------AGL15                             --------------->AGL15          <----------DOF2   ----------------->AGL3          <---------DAG2    ----------------->AGL2       ------>MYB83        >>>>>>>>>>MYB80 --------->AHL20(2)                    <----------DOF2       ------>MYB46(1)     ------------------------>ANAC81               --------->ATHB12          <- -------->DOF2     --------->LBD16  ----------->GT1                     <---------YAB1        ------- ----->YAB1       <---------HSFB2a(2)<----------ID1                   <-----------GT1         ------- ----->AHL20(2)   --------->HSFB2a(2)----------->GT1              <-----------ARR10           ------- ------AHL20(2)  <---------LBD16  ---------->DOF2        <---------YAB1>>>>>>>>>>>>>>>>>LFY--------->ZAT14   taaaagaccaagctttatctccagaatcaaaccaaaaaaaggaaaaaaaattatctctcaagattgcaaattttaccattggtcttttggttcttcactc  22327300         --------->MYB52(1)     <---------YAB1                --------->HSFB2a(2)    ----------->RAV1(1)       <---------ICU4                  <---------HSFB2a(2)            <------- --------ATHB12              --------->ICU4                <---------AHL20(2)           <---------ZAT6 -->ANAC46                  <---------ARR11(3)          --------->ARR11(3)     <---------ANAC55(2) -->ANAC58                  --------->ARR11(3)          <---------ARR11(3)     --------->ANAC55(2) -->ANAC58               --------->LBD16             --------->YAB1        <-----------HVH21 --------   aatgaacaacataccgagcgattgctccgagataatgacagttttgtttcacctataagattttatggaacagttttggtcacttaactagtcttatgga  22327400                   <------ZmHOX2a(2)             --------->TOE1(2)   --------->ZAT14<---------ARR11(3)   <---------ZAT14--------->ARR11(3) --------->ZAT2<---------TOE1(2) --------->At4g35610                                ----------->HVH21                            <--- <---------At4g35610    --------->YAB1           <---------ARR11(3)                             ----- --HSFB2a(2)----------->GT1                      --------->ARR11(3)                          <------- ->HSFB2a(2)--------->YAB1             --------->CCA1(2)                           <------ZmHOX2a(1)   accagcttactgaatcgtaagatcaataagagttttgagagatagagggaagaactcacagagaaatgtaagtcttggagagagaggagttgatagaatc  22327500                           --------->AtLEC2                           ------>ZmHOX2a(1)                         *TSS       <---------ANAC58--------->GLK1(2)       <---------ANAC58<---------ARR14(2)                                              ------>MYB83  <---------ICU4       --------->ARR14(2)                                            --------->AtMYB61  --------->ATHB12------>NtERF2                   ---------->DOF2                 --------->ANAC46 <---------YAB1   --------->LBD16                ------>ZmHOX2a(1)       <-----------GT1 --------TGA1    <---------DEAR3(1)             --------->TOE2(3)    --------->AHL20(2)------>MYB46(1) ---->YAB1      --------->SPL7          <---------ATHB12--------->AHL20(2)        <-----------GT1 --GLK1(2)      <---------LBD16     ------------>CBF    <---------AHL20(2)      <-----------GT1   gtcaccattgcttctccctccggcgattcctgcaaaaatccaatgtttatcctaaagtttaattttgtagataaattacattttacaccatccattttca  22327600               --------->MYB46(3)                  --------->ATHB12             <---------TCP15(1)                   <---------YAB1             <---------TCP20                   <---------AtMYB61             --------->PCF2                  <---------MYB52(1)                                <-----     <---------YAB1                          --------->ALFIN1                                  ------    <---------AHL20(2)                     <---------ANAC55(1)                              <--------    <---------AHL20(1)                     <---------ANAC58                       <---------ANAC58    --------->AHL20(2)         <-----------GT1--------->REM1(2)     --------->WRKY12  <---------AtMYB61   --------->YAB1        <----------DOF2   <---------ANAC58    ---------->DOF2    <---------ANAC58  <---------YAB1 ------------>CBF       <-----------GT1  --------->WRKY18(1)  <----------DOF2  ------   gtttattataatttggacccacaattccttttgttaccaatttatccgtgtggtcattggtcaaacaaagttgacgaaaactttacttgtggtcttgtgg  22327700        -------->P                                          <-------TEIL        ------>MYB46(1)                                ---------->DOF2      ------->GAMYB                               ----------->GT1     --------->MYB46(3)                          <---------TOE2(3)    <-----------------AG                         --------->DAG2    <-----------------AGL1                  <---------AHL20(2)   <-----------GT1                          --------->AHL20(2) ----ZAT18                                 <---------AHL20(2) --->ZAT18                                 --------->AHL20(2) -ANAC46------>MYB83                       --------->AHL20(1)    --------->AHL20(2)              ---- --->ZAT14                        --------->LBD16<---------TOE1(3)<---------YAB1           ----------   actcttaaccaacttggtatttttggacaatgactccgagcaaaatttaataaggttaaaagttcatttttattcaacaatataaacttcaaacaaagag  22327800                                               <---------YAB1                                               <---------AHL20(2)                                               --------->AHL20(2)               <---------ANAC58                                              --------->TOE2(3)      <---------AHL20(2)--------->At4g35610                                              --------->YAB1        --------->ICU4 <-----------HVH21          --------->GLK1(2)             <-----------GT1             <---------ATHB12   <---------At4g35610         <---------GLK1(2)          <---------YAB1          --------->ICU4      <---------ANAC58         --------->ARR14(2)        --------->AHL20(2)  --------->ANAC58       <---------ANAC46    -------->P                     <---------AHL20(2)  --------->ANAC46     <---------MYB46(3) ------->GT1                      --------->YAB1       --------->ANAC58 <-----------RAV1(1) >DOF2   <---------ARR14(2)       --------->AHL20(2)   --------->ANAC55(1) --------->ALFIN1       <--   agtgacaaccagattctcatcaacaatgccgatgaattaaaattacaatattaatacaagtaatgaggcaataaatggtggtgagtgtcatctgaattgg  22327900                                                            --------->TOE2(3)                                                   --------->GLK1(2)                                                   --------->ARR14(2)                                            --------->GLK1(1)                                            <---------GLK1(1)          --------->HSFB2a(2)                                            --------->CCA1(2)          <---------HSFB2a(2)                          ------>ZmHOX2a(1)--------->ARR14(2) ------>MYB83                        <--                       ------>ZmHOX2a(1)   <---------ARR14(2) ------>MYB46(1)                 -------                      <---------ALFIN1   --------->LBD16    <---------MYB59                 ---------           --------->MYB52(1)          <---------LBD16--------->HSFB2a(2)                 ----------- -------MYB46(3)    ------>NtERF2<---------MYB46(3)<---------ARR14(2)  <---------LBD16  ------->TEIL   ctgtttctgaaaataccagtgcctcctcctctaggttgttcaccggatatgagtttctgcaacctaatttgttctcggaatttggctatgaactcaccgg  22328000  Previous    Next  AGI:  At3g60370.1    Description:  immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT2G43560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70555.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 22325707    to: 22327525    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g60380.1    Description:  similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G16790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70557.1) Range:  from: 22327888    to: 22330241    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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