Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ------>NtERF2                                                                    ----------->HVH21                                                                    --------->ANAC58                                                                    --------->bZIP60(2)                                                                    --------->bZIP60(1)        <---------ICU4                                              --------->ANAC58       --------->ICU4                                               <---------bZIP60(1)       <---------ATHB51                                          --------->DEAR3(1)       <---------ATHB12    =============HOX2a_HOX2a         --------->ANAC55(2) ----->TOE1(2)<---------SPL7                  --------->LBD16   --------->DEAR3(2) -----O2--------->YAB1     ------>ZmHOX2a(2) <---------ANAC58   <---------At4g35610 ---->At4g35610           ==============HOX2a_HOX2a         --------->ANAC46 ---->TGA1a  <---------ANAC58                <---------ANAC58   --------->At4g35610 -----TGA1a  <---------ANAC58          --------->At4g35610  --------->ANAC58            ----------->HVH21 ------>RAV1(2)    <-------GAMYB       --------->ZAT2       <---------ANAC55(2) <---------GLK1(1) -----At4g35610--------->MYB52(1)------>ZmHOX2a(1)          --------->ANAC58   --------->ARR14(2) ---->O2<--------ATHB1    <------ZmHOX2a(2)  <---------ANAC46   <------NtERF2  <---------ARR14(2)   ctgagagcaataatagcttacggttgagatcgctccttatgagcaggccgtggaatagcattacgcagcgacgacatgttggatttgctcttgacgctgc  22325000                                                 <---------At4g35610                                                --------->ANAC58                                                --------->ANAC58                                            ------>ZmHOX2a(2)                                          --------->ARR11(3)                                          <---------ARR11(3)                                      --------->YAB1                                         --------                                   ---------->DOF2                    --------->MYB52(1) --------->TOE1(3)                               --------->At4g35610        <---------At4g35610            --------->TOE2(3)   aatttcagtcacaaaactgtttagaattaagagagcttaaagatgatcttaagctactcgagctcatcaacttaacgaattgaaactgaaaccctaatct  22325100                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                            ---------                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(3)                                                                        ----------->GT1    <---------ARR14(2)                                                                      ---------->DOF2      --------->ARR11(3)                                                                      ===============================                                                                    --------->ANAC58       <---------GLK1(2)                                                                    --------->ANAC58     <---------ATHB12                                                                  --------->MYB52(1)     ----------->ARR10                                                               --------->ANAC58    --------->ANAC58--                                            --------->MYB52(1) --------->ANAC58    --------->ANAC58<-      ------->TEIL                          ------>MYB46(1)    --------->ANAC46    <----------ID1 <--   <---------YAB1                           ------>MYB83   --------->DEAR3(2) ======================= ->GLK1(2)             ----------->RAV1(1)<---------MYB59  --------->MYB46(3) ---------->DOF2     ---   gaagtatgaatctaatccaacaatgcaacattctcaagtctaaacctaactatgcattcgaacagacgaaacgaaagaaaaaaagaagccaaagattctc  22325200                                            --------->DAG2            --------->ANAC58                                          ---------->DOF2             --------->ANAC58 -------TGA1a                       <---------HSFB2a(2)           <------NtERF2 ------>TGA1a                       ------>NtERF2                ------>NtERF2 -------ANAC55(2)                   --------->HSFB2a(2)         --------->LBD16 ------>ANAC55(2)                  --------->DEAR3(1)           <---------LBD16 -------ANAC46                    <------NtERF2                <------NtERF2 >GLK1(2)                        ------>NtERF2                 <---------LBD16               -------- =======bZIP_DOF                --------->DEAR3(1)             --------->ATERF1(1)         ---------- ----->MYC3                     <---------DEAR3(1)            <---------RAP2.3(1)          --------->At4g35610 ------MYC3                    --------->ATERF1(1)           <---------DEAR3(1)         --------->WRKY12 -------O2                    <---------ATERF1(1)  --------->DAG2--------->HSFB2a(2)    ----------->HVH21 =======bZIP_DOF             --------->ANAC46----------->GT1--------->ATERF1(1)         --------->WRKY38(1) ------>O2                   ----------->HVH21    ---------->DOF2--------->LBD16  <-----------GT1   acgtgaaatacaggggaaccctagaaattagacgacgccgagaagaaaggtgaaaagtagaagtcgccgggaacacaacaaatttcaccgatgacctgaa  22325300                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                      --------->ZAT2                                                                                      <---------ZAT2                                                                               <---------HSFB2a(1)       --------->HSFC1(1)                                                      --------->HSFC1(2)       <---------HSFB2a(2)                                                     <---------HSFC1(2)       <---------HSFC1(1)                                   ---------->DOF2   ------->TEIL       --------->HSFB2a(2)                            <---------LBD16        ------>MYB83      <---------LBD16       <------NtERF2        <----------DOF2             ------>MYB46(1)    <---- --->HVH21                <---------DEAR3(1) <---------TOE1(3)             <---------MYB59     ------ ->RAV1(2)---------->DOF2 <---------DREB2C(2)<---------TOE2(3)             *TSS--------->HSFB2a(1)   acttggtttctggaaaggagtagagaagtcggcgagaagaagagtttagggttttttggggataaagaaaactcaaaccgaaccttctagctgagactaa  22325400           --------->ANAC55(2)           <---------ANAC55(2)           --------->O2                                      ========================================           --------->ANAC46                                  --------------->AGL15           <---------O2                ---------->ID1     --------->AtLEC2          <-------TEIL                <-----------GT1   <---------ANAC58        --------->ARR14(2)           <-----------GT1    <---------ANAC58        <---------ARR14(2)   <-----------GT1        <----------DOF2   <---------ANAC46          <---------At5g28300   <---------ANAC58         <---------ALFIN1 -----TOE2(3)               <-----------GT1   --------->MYB52(2) --------->YAB1  --------->AHL20(2) --->MYB52(1)  ------------>CBF  <----------DOF2   <---------ANAC58    <-----------GT1           <---   gggtttagtggatacgtcgcaattactcatttaccctttttatcgttttagttgctttacttgcaaattatagtttccacacataaaatgtcttaacgtc  22325500                         ----------------->AG                         ----------------->AGL1                      <----------DOF2                   <-----------GT1                                                                 <-                  --------->AHL20(2)                                                    <---------AHL20(2)            <---------ANAC58                                                        --------->AHL20(2)            --------->ANAC55(2)                                                     <---------AHL20(2)            <---------ANAC55(2)                    -------->P                       <---------AHL20(1)            <---------ANAC46                       <---------At5g28300 ------->TEIL --------->AHL20(1)            <---------ANAC58                   <-----------ARR10      <---------CCA1(2)<---------YAB1 ==========================================MADS_MADS         <<<<<<<<<SARD1--------------->AtSPL8  <- -------DOF2----------->GT1                <---------ZAT18   <<<<<<<<<CBP60g  <-----------GT1      <-   tttagatgaaaatttcgtaattaactttccaaatgtgatgagcattgcacatctaccgttccaaatttcaatgtatctttgtacaatttattatttgttt  22325600                                                --------->ANAC58                                                --------->ANAC46                                                --------->ANAC58                                       <---------YAB1                                  <-------TEIL         ---------->DOF2             --------->YAB1                           --------->ANAC58      --------->YAB1                 --------->AHL20(2)                       --------->ANAC58 --------->ALFIN1                   --------->ICU4             <---------ANAC58       --------->CCA1(2) --------ANAC58                ----------->GT1 <---------TOE2(3)            --------->MYB52(1) --------ANAC46               <--------P      --------->MYB52(1)<----------DOF2      <---------ARR14(2) --------ANAC58             <---------ANAC46<---------MYB52(2) <---------ANAC58      --------->ARR14(2)   ggggtgtttcataaagagtgccaaaatttggggtagaaattataaaactaacgaaacaatgcattgctttaacttgacaaacgcacagatacagagagac  22325700                                              --------->MYB46(3)                                            ----------->RAV1(1)        --------->DAG2          --------->DAG2                   <----------ID1             --------->DAG2        <--------         ---------->DOF2                 --------->ANAC58            ---------->DOF2       ------>ZmHOX2a(2)   --------->CCA1(2)                     --------->ANAC58     --------->ICU4             --------->ARR11(3)   --------->GLK1(1)         <---------ANAC55(2)           <---------YAB1                <---------ARR11(3)  <---------ARR11(3)         --------->ANAC55(2)---------->DOF2  <---------YAB1      --------->ANAC55(2)  --------->ARR11(3) ----------->GT1   ---------->DOF2  --------->TOE1(2)        <----------DOF2   agaagatatcaaaaagctccaaacgcttaaaacgtgatcaacaaagcaacaaaagtaaactacgattatgaaaaaggtcgagactttacatgatctttat  22325800                                                              --------->YAB1                                                              <---------ICU4                                                              <--------ATHB1                        -                                                              --------->ATHB51                      -                                                             <---------YAB1                       <--                                                             --------->ICU4                       <--                                                       ---------->DOF2                       --------                                         <---------ARR11(3)--------->YAB1       <----------DOF2   <--                   ------->TEIL    --------->ANAC46 --------->ANAC58        ---------->ID1   -------- --DOF2   <---------AHL20(2)--------->ANAC46        --------->ANAC58  <----------DOF2        <-------   ctgtctctctatgtaattgtgcatctctacatgaaacccacaagataaatgcctaagcaaagaataattgttctttttgtttctttgtagttctcatctg  22325900  Previous    Next  AGI:  At3g60360.1    Description:  EDA14/UTP11 (EMBRYO SAC DEVELOPMENT ARREST 14). Identical to Probable U3 small nucleolar RNA-associated protein 11 [Arabidopsis Thaliana] (GB:Q9M223); similar to hypothetical protein [Vitis vinifera] (GB:CAN82884.1); contains InterPro domain Small-subunit processome, Utp11; (InterPro:IPR007144) Range:  from: 22323233    to: 22325375    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g60370.1    Description:  immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT2G43560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70555.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 22325707    to: 22327525    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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