Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ======================HOX2a_HOX2a                                                                     ------>ZmHOX2a(2)                                                                    =======================HOX2a_HOX2a                                                                    <------ZmHOX2a(2)                                                                    <---------RVE1(1)                                                                   --------->AGP1                                                                   --------->ARR11(3)            <---                                                                   --------->ARR14(2)            ----                                                                   <---------ARR14(2)           -----                                                                   <---------AGP1         <---------AHL20(2)                                                                   <---------ARR11(3)     --------->AHL20(2)                                                     <---------ARR14(2)                   <---------YAB1                                                     <---------ARR11(3)                  --------->AHL20(2)                                                     --------->GLK1(2)<----------DOF2    <---------AHL20(2)              --------->REM1(1)      ------->TEIL    --------->ARR14(2)             ------>ZmHOX2a(1)      --------->ALFIN1               <-------TEIL    --------->ARR11(3)      <-----------GT1  <------ -------->At4g35610     --------->ANAC46     ---------->DOF2      <---------CCA1(2)--------->TOE2(3)   gatgctgagaggggctacaattttctacgtcttcaaatgtacattggtaaaggaatatctgttttctcagatctttttttttcatccttattttaattac  22309200                                                                                                   --                                                                                                   --                                                                                              <------NtERF2                                                                                             --------                                                                                             --------                                                                                             ------>NtERF2                                                                                             --------                                            <-------GAMYB                                    <-------     --------->At5g28300                   --------->MYB46(2)                                --------    ----------->GT1                        --------->MYB111(2)    <----------DOF2           ---------  <---------LBD16                          --------->MYB52(2)   --------->ZAT2              --------- ------------AGL15        ---------->DOF2  --------->MYB111(1)  <---------ZAT2              <-------- ----------->AGL15    --------->AHL20(2)------------>MYB.PH3(2) <---------At4g35610         <-------- ------------>AGL1    --------->YAB1   <---------ZAT6           --------->At4g35610        --------->RAP2.6(3) -----GT1    --------->YAB1      >>>>>>>>>TBF1       <---------YAB1             ----------->GT1    <-   attttgcggtaacaatagtgacaataaaaaaagaagaagaagagttagttgcattttgaatgagtcagctttcttctgcattgggttaatctggccggca  22309300 ------->ARR11(3) ------->GLK1(2) ->ANAC58 ->LBD16 ->ANAC58                                       <---------ANAC46                     ----------->RAV1(2) --RAP2.6(3)           --------->ARR11(3)       <---------ANAC58              --------->ARR14(2) --->GT1               <---------ARR11(3) <---------AHL20(1)                  <---------ARR14(2) >RAP2.6(2)     --------->AHL20(2)        --------->AHL20(1)                  <---------GLK1(2) >ATERF1(2)    <---------YAB1             --------->ARR11(3)                --------->LBD16 -DEAR3(1)----------->GT1              --------->AHL20(2)                  <---------HSFB2a(2) -ATERF1(2) <---------MYB52(1)  ---------->ID1  <---------ANAC58           --------->HSFB2a(2) --------ARR11(3)<---------AHL20(2)  <----------DOF2             ---------->ID1--------->GLK1(1)   aaatctttgaattcgttattatatagaccttcttgtcttctttatatattgcttgcattacacatttgtctcaacttccagatttgcccctggtttaaaa  22309400                                                      <---------AtMYB61                                                    <----------DOF2                                              ----------->HVH21                                        --------->MYB52(1)  <---------TOE1(3)                                       ----------->HVH21 <---------REM1(1) <-----------RAV1(2)     <-             <----------DOF2 <----------DOF2  --------->ALFIN1     <-----------GT1                 <-      ------>ZmHOX2a(1)--------->WRKY18(1)<---------ANAC46  <---------TOE2(3)                 <------   cgattgtcctgtttcctttgtgaaggtcaagctttgaagggctaacgggtgatgctttggtgaaggttttttctggtccaggtttgtgcttattttgcat  22309500                                                                                 <---------At4g35610                                                                         <---------YAB1                                                                       -------->ATHB1                                                                       <---------ICU4                                                                       --------->ATHB12                                                                       --------->ATHB51              --------->ANAC46                                        <---------AHL20(2)              <---------TGA1a                                         --------->AHL20(2)              --------->TGA1a              <---------TOE2(3)          --------->ICU4           ------              --------->O2           <---------AHL20(2)               --------->AHL20(1)   --------->YAB1     <----------DOF2             <---------AHL20(2)                <---------AHL20(2)     <---------YAB1     ===================bZIP_DOF --------->AHL20(2)                --------->ICU4--------->GLK1(1) --------ANAC58                  <---------ATHB51    *TSS          --------->AHL20(2) <----------DOF2 --------ANAC58                  <---------ATHB12  <---------At4g35610<---------YAB1  <---------DAG2 ---AtLEC2    <---------O2 --------->TOE2(3)<---------YAB1    ----------->GT1   ----------->ARR10   tgcttctctttgattcacgtctgcataaacatcaaataattcatttatgtttgagttgattatgtagaaaaaattattaggggagatgctttatgataag  22309600                                     --------->AHL20(1)                                     --------->ARR11(3)                                <---------YAB1                                     <---------AHL20(1)                             <---------AHL20(2)                                     <---------ARR11(3)                          --------->ARR14(2)   --------->DAG2               ----------->GT1      --------->ICU4              <---------ARR11(3)  ---------->DOF2       <---------TOE2(3)         --------->ICU4                 <---------GLK1(2) ----->GT1             ---------->DOF2--------->AHL20(2)           <-----------GT1 --------->AHL20(2)   aaaaaaaagtggtcttgtggtatcttaaggcagaaggaaaatatttagtgtcttaatgagtaatagatttatctgtctatccagattttataactgagtt  22309700                     --------->DAG2                    ---------->DOF2               --------->ANAC58                                                              <-------               --------->ANAC58                                                            ------->TEIL               --------->ANAC46             <---------------------WRI1          <---------AGP1         ------>NtERF2                <---------ANAC46             <---------LBD16     --------------         --------->LBD16            --------->MYB52(1)            <---------ALFIN1------>ZmHOX2a(2) -       <---------LBD16             ----------->HVH21           --------->YAB1   --------->ARR11(3)<--      --------->MYB52(1)  <---------HSFB2a(1)    --------->At4g35610--------->ANAC46 <---------MYB52(1)   ttagtaacttccggctcaagcaaaaaggaagttcgatatgacggacatagaagctctcaaggctatcaccacggagagcattgatctggtatgtactttt  22309800                                 <---------YAB1                               <---------At4g35610                             <---------ANAC58                                          <------ZmHOX2a(1)                             <---------ANAC58                                   <-------GAMYB      <---------ALFIN1    <---------WOX13(1)                                   ------>ZmHOX2a(2) ---DOF2 <----------DOF2--------->ATHB12                                       ===============HOX2a_HOX2a ->AtSPL8<---------DAG2<---------YAB1                                          --------->MYB52(2) -------->ANAC46     <---------At4g35610                                       <---------MYB46(3) ---------GT1        --------->At4g35610<----------DOF2            XXXXXXXXXXXXXXXXXXXX>MIR841B*   <-   atacctcaccactttttttttgcagatgattgcttctgatagcttttatgtcaaatatgaacaaatgcaatttctcatggatcgttgcaggaaaatgttc  22309900                                                                                         ------->GAMYB                                                                                        <---------MYB52(2)                                                                                <---------MYB46(3)                                                                        ----------------->AG                                                                        <-----------------AGL1                                                          --------->ZAT14       ----------->GT1                                           <---------WRKY18(1)<------ZmHOX2a(1) <------MYB46(1)                                         <---------WOX13(1)<-----------RAV1(2)  <------MYB83                                ---------->DOF2           --------->ZAT18      --------->MYB59                              --------->ANAC58            <---------ZAT14<---------------AGL15                              --------->ANAC46        <-----------------------TaNAC69(2)--------->MYB46(3)                  <---------ARR11(3)   <------ZmHOX2a(1) --------->ALFIN1--------------->AGL15    <-- ------GAMYB<-----------GT1   --------->ANAC58      <---------ATHB12   -------->P    --------->REM1(1)   ccgttgaagaggtttttcaacatctcaaatgcacgaaagaaggattgacctccaatgaagtgcaggagcgacttaccttgtttggttacaacaaacttga  22310000                                                                                        <------MYB83                                                                          ===========================                                         ------>ZmHOX2a(2)                ------>ZmHOX2a(2)       <--      ----------->GT1                  <---------ARR11(3)               --------->ARR11(3)--------->ARR14(2)     <---------TOE2(3)       <---------ATHB12    <-----------GT1        <---------ARR11(3)<---------ARR14(2)   ---------->DOF2      <-----------GT1--------->ARR11(3)      <------MYB46(1)          <------MYB46(1) ----ZmHOX2a(1)   --------->ICU4  <---------AtLEC2             <------MYB83    <----------DOF2 <-----   ggagaaaaaggttttaaaaaatgatttttcaatcttgcattgatctcttattttctctctatggatggtatgttgatctctctttctatttggttctgca  22310100  Previous    Next  AGI:  At3g60328.1    Description:  unknown protein Range:  from: 22309342    to: 22309500    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g60330.1    Description:  AHA7 (ARABIDOPSIS H(+)-ATPASE 7); hydrogen-exporting ATPase, phosphorylative mechanism. Identical to ATPase 7, plasma membrane-type (AHA7) [Arabidopsis Thaliana] (GB:Q9LY32); similar to AHA11 (ARABIDOPSIS H(+)-ATPASE 11), ATPase [Arabidopsis thaliana] (TAIR:AT5G62670.1); similar to AHA4 (Arabidopsis H(+)-ATPase 4), ATPase [Arabidopsis thaliana] (TAIR:AT3G47950.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to plasma membrane H+-ATPase isoform LHA2 [Lycopersicon esculentum] (GB:AAD55399.1); similar to H(+)-transporting ATPase [Solanum tuberosum] (GB:CAA54046.1); similar to unnamed pr Range:  from: 22309553    to: 22314648    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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