Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----NtERF2                --------->ANAC58 ------ATERF1(1)           --------->ANAC58                                         --------->ANAC58 -->NtERF2               <------ZmHOX2a(1)                                          --------->ANAC58 ------MYB46(3)        ------------------------>ANAC81                     <---------YAB1 ---->ALFIN1          <------ZmHOX2a(1)                                  <---------ICU4 -----DEAR3(1)      --------->ALFIN1                         <------ZmHOX2a(1)     <---------ZAT18 ---MYB46(3)    <---------At4g35610        --------->At4g35610           --------->YAB1  <------MYB46(1) --DEAR3(1)     <---------LBD16            <---------At4g35610     --------->YAB1  --------->ZAT18 ->ALFIN1       --------->At4g35610  --------->MYB52(1)  --------->ICU4 --------->ICU4   <------MYB83   ggctacagcgattgagacagcggaggaggaagcaaatggaaacggagatgagaagagtcatgaggagaatgagaatgatgactagtacgcttggtttgag  22266700                                    --------->LBD16                                    ------>NtERF2                                   --------->ANAC46                                   --------->DEAR3(1)                                   --------->ANAC58                                   --------->ANAC58                                 --------->ANAC58                                  <---------LBD16                                   --------->ANAC58                                 ------>ZmHOX2a(1)                               <---------At4g35610                           --------->HSFC1(2)    <---------WOX13(1)              --------->At4g35610                          <---------TOE1(2)<---------ANAC58                <------ZmHOX2a(1)                       --------->YAB1      <---------ANAC46        --------->YAB1--------->ZAT2                     --------->GLK1(2)     <---------ANAC58 --------->GLK1(2)    <---------ZAT2   actatcgagagaagaagagtgagaatcgtagtttcctccgccatggctgggattgatgagagattccattgatgagaggagagagctcgcacagagagaa  22266800                                                                             <-------MYC2                                                                             <-------MYC3                                                                             ------->MYC3                                                                             <-------PIF4                                                                             ------->PIF4                                                                             ------->MYC2                                                                             <-------MYC4         ---                                                                             ------->MYC4        ----                                                                             ------->PIF5        <---                                                                             <-------PIF5       <----                                                                            <---------TGA1a     <----                                                                            --------->bZIP60(2) <----                                                                            --------->TGA1a     -----                                                               <------ZmHOX2a(1)                <----                                                          <---------ANAC46  <---------O2        <----                                                        --------->MYB52(1)  --------->O2        -----                      ---------->DOF2                  ----------->TGA1     <---------ANAC55(2) <----                   >>>>>>>>>TBF1                     <---------ICU4         --------->ANAC58    -----                >>>>>>>>>TBF1                      <---------AHL20(2)       --------->ANAC58  -------             >>>>>>>>>TBF1            <---------ALFIN1 ----------->HVH21    --------->ANAC55(2) <----          >>>>>>>>>TBF1 ----------->GT1           --------->YAB1           <-------TEIL      --------     ------------------------>ANAC81 --------->LBD16 --------->YAB1       ------------->DYT1<--------   acagagagagaagaagaagaagaagaaagttataaattccccaactgttttatattaatgacggaggagaagagaggcacgtgagagtgagagaggtcac  22266900   <-----------HVH21 ------>ALFIN1 --->MYC3 ----MYC3 -----bZIP60(1) -----ANAC55(2) -----ANAC58                      --------------->AGL15 ---->ANAC55(2)                   <---------------AGL15 -----TGA1a                       <---------ANAC46 -----ANAC58                     ----------------->AGL1 ---->TGA1a                      ----------------->AGL2                                   ------>MYB46(1) -----O2                         ----------------->AGL3                                   ------>MYB83 ---->O2                        ------>NtERF2                                          --------->DEAR3(2) ------>DYT1               --------->ZAT14                                    <-----------HVH21 -----ANAC46               <---------ZAT14                               --------->AHL20(2) --->HVH21           <-----------GT1                               <------NtERF2       --------->MYB46(3) ---HVH21 ------->TEIL --------->ZAT6  ---------->DOF2    ---------->DOF2<---------AHL20(2)   gtgagggtcatggaccggtcttattactctactctgccttataaagaagggggacgttgggaaagaggcagagaaataaatgtcatcgaaccaactcaaa  22267000                                                    <----------DOF2           <---------TOE2(3)                                                   <---------ANAC58           <---------TOE1(3)                   ----------->GT1                 <---------ANAC58     --------------->AGL15                  --------->DAG2            <-----------GT1             <---------------AGL15                 ---------->DOF2        <----------DOF2              <---------ARR11(3)        <---------AHL20(2)             <---------ANAC58         --------->ZAT18  <---------CCA1(1)        --------->AHL20(2)             <---------ANAC58      *TSS    --------->ARR11(3)            <-       --------->AHL20(2)      <---------ATHB12<----------DOF2  <---------ZAT18  <---------RVE1(1) <-   ctgtctatatttaattctataaagttatatcaaatcaattggcttttcactttgctttcaattttgtccactatcttcttaaggtatttttgcattttgt  22267100              <------ZmHOX2a(1)            <---------TOE2(3)        <------------CBF          <---------TOE2(3)      <---------AHL20(2)      ------->TEIL            ---------->DOF2      --------->AHL20(2) <---------ANAC46           --------->ANAC58 --------TOE2(3)      ----------->HVH21             --------->ANAC58                       ---------- --------TOE1(3)    ----------->GT1               --------->ANAC46<-------TEIL <---------ANAC55(2)   taaggtcataaattgaggagagttgtgacatgtatttatgtaaaacattttcacaccaaagtcatagtttcattttcaaatatgtaaacaaaattgtaga  22267200                                         <---------ANAC58                                         <---------ANAC58                                    <--------HAHB4            <---------ANAC58                                    --------->ATHB12          <---------ANAC58                                    --------->YAB1          <---------YAB1                                    <---------ICU4------>ZmHOX2a(1)                                   --------->ICU4<---------ANAC58                                   <---------ATHB12     <----------DOF2                 <------ZmHOX2a(2) ->GT1    ---------->DOF2  --------->ALFIN1      <---------ANAC58         <---------ANAC46   aaacaatacaaataaagttttatttggaggtgttggaatcatttcttgagtccttgctctttatgcttaccttgttgagtctaaaaacagatcgatacca  22267300                                                                                       <-----------GT1                                                                                 <---------ICU4                             --------->ATHB51        <----------DOF2          <---------ICU4                          <---------ICU4             <---------DAG2           --------->YAB1                         <---------YAB1             <---------ANAC58          <--------HAHB4                         --------->ICU4             <---------ANAC58         <---------YAB1                       --------->YAB1          <-----------RAV1(1)           --------->ICU4                      --------->ICU4       <---------DAG2        <---------YAB1 --------->ICU4            --------->LBD16 <---------YAB1 <----------DOF2     --------->CCA1(2)<---------YAB1  <-----------GT1     <---------YAB1 <-----------GT1<---------ANAC46         <---------ATHB12   <----   tttttgacattttccccaattcttatgattattattgtttttcaactttatgttgcttttttgatatatgagtgatgctatcattattttcacactgtct  22267400                                                                                                -----                                                                                         --------->DAG2                                                   --------->GLK1(2)                    ---------->DOF2         --------------->AGL15                     --------->ARR14(2)                --------->LBD16         <---------------AGL15            <---------ZAT6                         --------->GLK1(2)        ----------------->AGL3            ----------->GT1                        <---------ARR14(2)     --------->GLK1(1)              ------>NtERF2  <---------ARR14(2)            --------->ARR14(2)     <---------GLK1(1)           --------->At4g35610              <---------AHL20(2)<---------HSFB2a(2) ------DOF2<---------MYB52(1)    <---------At4g35610             <---------AHL20(2)<---------LBD16   ttttctgatatccattagtagtttttttttttttttgctgccaagtgttacaaaatccgatgttttttttatttatgcaatagaatccggaaaagtttgt  22267500                                  --------->MYB52(1)                                 --------->MYB52(1)   --------->TOE1(2)        <---------DOF5.7(2)  --------->ANAC58       --------------->AtSPL3      --------->DOF5.7(2)    --------->ANAC58       <---------------AtSPL3    <---------ANAC58       ---------->DOF2          <---------------AtSPL8    <---------ANAC55(2)  --------->ANAC58          ---------->DOF2                              <----    <---------ANAC46  <------NtERF2           ----------->GT1                                 -------    <---------ANAC55(1)  --------->ANAC58--------->AHL20(2)      --------->AHL20(2)<---------At4g35610    <---------ANAC58 <-----------HVH21   <---------AHL20(2) ------->TEIL <---------ARR11(3)  <------- ----->ID1      <-----------RAV1(2)  ----------->GT1--------->DAG2 <-----------GT1 --------->At4g35610   ctccttgcgtgaacgaattcaggcgtcaagaaagcaaaccggtttaaatggagaaaagtacgaacattttaacaagataactataagctgttagaatgat  22267600  Previous    Next  AGI:  At3g60220.1    Description:  ATL4 (Arabidopsis T?xicos en Levadura 4); protein binding / zinc ion binding. Identical to RING-H2 finger protein ATL3J (ATL3J) [Arabidopsis Thaliana] (GB:Q9LY41;GB:Q9SPV6;GB:Q9ZT40); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G30400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70471.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 22265573    to: 22267061    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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