Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC46                                                               --------->ANAC46                                                            --------->ZAT14                                                           <----------DOF2                                                           <---------DAG2                                                        <-----------GT1                <---------YAB1      --------->YAB1     <-------TEIL             <<<<<<<<<MYB2         <---------YAB1    <---------GLK1(2)           <------MYB46(1)       <---------CCA1(2)   --------->ARR14(2)           <------MYB83     <-----------GT1          <---------ARR14(2)   ttcaccaagtgtttggttttcattaccaaaaaaccatatcataagattagaacaagattcactttacacaacaattagttagagacatgagactcactga  22254600                                                 <------ZmHOX2a(2)                              <----                        --------->LBD16         <---------ARR11(3)                              <----          ----------------->AGL2     <---------At4g35610                    --------->DAG2      -----          ----------------->AGL3     --------->ZAT14       <---------------AGL15                -----          =================================================================MADS_MADS          -------        -------->P  --------->ARR14(2)          --------->ARR11(3)         ---------->DOF2--------->TOE2(3)      <---------MYB111(1)            <---------ZAT14       --------------->AGL15       ----------->RAV1(1)    ------->TEIL    <---------ARR14(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->ANAC46   agcatgtacttacccaaattcagaaccggacttaatttctgctctgagaagatcaccagcactaaaatgggtatagctaaagtgcttcacaacattagca  22254700                                                     --------->ANAC46        <----------DOF2                          <---------ATHB12       <---------DAG2                           --------->ANAC58                <---------YAB1 --------------->AtSPL8                         --------->ANAC58          --------->ANAC58        --- -----ZAT14              <---------ALFIN1       --------->ANAC46          --------->ANAC58      ----- -----ZAT18           <------ZmHOX2a(1)      --------->MYB46(3)      --------->TOE1(3)        <------ ---->ZAT18         --------->LBD16      --------->YAB1              --------->TOE2(3)       -------- ---->ZAT14        <---------HSFB2a(2)  <---------ATHB12          <-----------GT1          <---------ANAC46 -->At4g35610      --------->HSFB2a(2)--------->WOX13(1)----------->RAV1(1) --------->YAB1--------->DAG2   cactgagtaccttttccacttccaggaccacctatagaatcaatcaaaccactcaacaccacaaaaattaaccttcaagcatatgattacatagagtgga  22254800          ------>MYB46(1)          ------>MYB83        --------->MYB46(3)        <---------MYB59       --------->ANAC46                                                          <---------HSFB2a(2)     <-----------GT1                                                       <---------ARR14(2)  <---------ICU4                                  --------->YAB1           <---------ARR11(3)  --------->YAB1                                 <-------TEIL              --------->ARR11(3) --------->ICU4                          --------->STY1(1)                 --------->ARR14(2)      -- <---------YAB1                          <---------STY1(1)              --------->AHL20(2)    ------- ------>ICU4                           ----------->RAV1(2)              --------->YAB1   ----------->GT1 ------>GT1                          <---------ALFIN1  <-------TEIL  ------>MYB46(1) --------->GLK1(2) ---ZAT14 ----------->RAV1(1)       <-----------------AGL1           ------>MYB83--------->HSFB2a(2) ->ALFIN1--------->ANAC46<---------At4g35610 <---------ZAT18 ------>ZmHOX2a(1) ------>ZmHOX2a(1)  <--   gttattattacccaacacaaaaactacagttgatttcttccacctagggcattcatgttcgtcctgtaaccaaataatatcctcgagaatttagaaaaaa  22254900        <---------AHL20(2)        <---------YAB1     <---------RVE1(1)    --------->ARR14(2)                                   <---------DAG2    <---------ARR11(3)   <---------ICU4                  --------->TOE2(3)    <---------ARR14(2)  --------->ICU4                <---------ALFIN1         --------->HSFB2a(1)    <---------GLK1(2) --------->YAB1       --------->At4g35610                 <---------HSFC1(2)   - ------->MYB52(1)    <---------ATHB12      <---------At4g35610                 <---------HSFB2a(1)  - -->AHL20(2)         <---------YAB1        ----------->GT1                     --------->HSFC1(2) <-- ---------GT1        --------->ICU4      <-----------RAV1(2)  <---------LBD16<------ZmHOX2a(1)    ---   ataccagatttttattagttacaatgataatgaaattggatagacaggtgaatacaacaccttattcggagcatcgataggagtttccatgatcaaggcg  22255000                                                                                                  ---                                                                                        --------->REM1(2)                                                 --------->At4g35610                   --------->ALFIN1                                                 <---------At4g35610                 <---------ANAC58                                               <-----------RAV1(2)                   <---------ANAC46             --------->ANAC58                 <-------TEIL   ----------->GT1         <---------ANAC58         ------->TEIL                        --------->CCA1(2)             ----------->GT1     ------ ---------->TGA1                             --------->GLK1(2)           <------ZmHOX2a(1)     <----- ---------->HVH21                           <---------ARR14(2)         <---------TOE2(3)--------->ZAT14 -------O2   --------->ANAC58       *TSS    --------->ARR14(2)         <---------TOE1(3)<---------ZAT14 ------>O2   --------->ANAC46   <-----------RAV1(2)         --------->CCA1(2)   --------->MYB52(1)<--   atgtgacgatgaatcacgcacaagtttgacaagtccaggcgaagaagattcaggtgaagaagatagagaaattaaggaagaaaaacggcgtgtagtctgc  22255100                                  --------->ARR14(2)                                  <---------ARR14(2)             <---------AtLEC2 ------->PIF5            <-------TEIL      <-------PIF5                       --------->ANAC58          <-------MYC3        ------->MYC3                       --------->ANAC58          ------->MYC2        <-------MYC3                       --------->ANAC55(1)          ------->MYC3        ------->MYC2                       --------->ANAC46         -------->HAHB4          <-------MYC2        <-------MYC2                    --------->ZAT14          --------->YAB1         <---------ANAC46    --------->ANAC58                 <-------TEIL          --------->YAB1 <---------MYB46(3)          --------->ANAC58                 <---------ZAT18  <---------AHL20(2) ------>MYB52(1)        --------->ANAC46              --------->ANAC58   <---------ANAC58 --------->YAB1 --->At4g35610          --------->ANAC58              --------->ANAC58   <---------ANAC58<---------YAB1 ----At4g35610          --------->ANAC58     ---------->DOF2  --------->ZAT18  --------->AHL20(2) -------DOF5.7(2)     <-----------GT1   ---------->DOF2  ---------->DOF2 <---------ANAC46--------->ICU4   taacggttgcaacgtgcatgttttaaacggcacgcggttctctaaagtgaagcgagacggaaagtacacgctatggcgtttttaaatagtaatgataagt  22255200                                                                                 ----------->RAV1(1)                                                                         ------->TEIL                                                                      --------->MYB46(3)                                                  <-------TEIL        <---------MYB52(2)                                              <-------TEIL          --------->MYB52(1)                                        <---------YAB1              <---------DOF5.7(2)                                       --------->ARR11(3)          <---------WRKY45         <--------                                       <---------ARR11(3)          <---------WRKY12--------->MYB46(3)                                      --------->YAB1               <---------WRKY38(1)    ------->TEIL                                     <---------YAB1               <<<<<<<<<WRKY6 --------->MYB52(1) <-----------GT1                   <---------At4g35610  ---------->DOF2------->GAMYB------->GAMYB   ttattacaaaacgtctcaagtctctctcaatagggtctgatgatcatatacatacatacaaagacatagtcaacgaacttaaacaacagacgaatttata  22255300                                       --------->YAB1   ------->GAMYB           <---------ANAC46                                     <-----------GT1 --------->MYB52(1)         <---------ANAC58                              <---------TOE1(3)   --------->ANAC58           <----------DOF2                              <---------TOE2(3)   --------->ANAC46          <---------ANAC58                          <----------DOF2         --------->ANAC58   <---------CCA1(2)   --------->ZAT6         --------->AtMYB61<---------DAG2 --------->At4g35610  --------->WOX13(1)<---------ANAC58 -AHL20(2)      --------->ANAC46    <-----------GT1  ----------->RAV1(1)    <---------ANAC58   gttctctaaaaccatcaccagaaacacacttttaggttttatcatcttacccaagcaacagcatcaatctcatctcttgctttcttgtataactctagcc  22255400                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                   --------->GLK1(1)                                  --------->ARR11(3)                                  <---------ARR14(3)                                  <---------ARR14(2)                                  <---------ARR11(3)                  --------->LBD16 --------->ARR14(2)                <---------LBD16   --------->ARR14(3)         --------->ZAT14          <---------ARR11(1)                                       --------->YAB1       --------->ANAC58           <-----------ARR10                                     --------->YAB1       --------->ANAC58          <---------ARR14(1)                                   ------>MYB46(1)     <---------ALFIN1           --------->LBD16    <-----------HVH21               --------->MYB46(3)    --------->ZAT18           <---------LBD16    <------------AtMYB77           <---------ETT(1)    --------->ZAT14   --------->WOX13(1)       <-----------GT1               <-----------GT1   ------    <---------ZAT18  <-------TEIL<---------CCA1(2)------->GAMYB   ----------->RAV1(2) ------>MYB83   tcttcgcgcactctagtctccggtccatcaatgccggatcttcatctagtaactgtcccaactgtttcccctgtgaaattttccgaccaactataagatt  22255500  Previous    Next  AGI:  At3g60180.1    Description:  uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative. similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.3); similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.1); similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.2); similar to unknown [Populus trichocarpa] (GB:ABK95915.1); contains InterPro domain Adenylate kinase; (InterPro:IPR000850); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (Inte Range:  from: 22253479    to: 22255036    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g60190.1    Description:  ADL4/ADLP2/DRP1E/EDR3 (DYNAMIN-LIKE PROTEIN 4); GTP binding / GTPase. Identical to Dynamin-related protein 1E (DRP1E) [Arabidopsis Thaliana] (GB:Q9FNX5;GB:Q9M1C4;GB:Q9SE82); similar to ADL1D, GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT2G44590.3); similar to ADL1D, GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT2G44590.2); similar to ADL1C/ADL5 (DYNAMIN-LIKE PROTEIN 5), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G14830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71045.1); similar to hypothetical protein OsI_033530 [Oryza sativa (indica cultivar-group)] (GB:EAY79571.1); similar to unnamed protein product Range:  from: 22255144    to: 22258808    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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