Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <-------PIF5                                          ------->PIF5                                         --------->O2       <-----------GT1                   <---------O2    <---------REM1(1)                    --------->TGA1a ------>ANAC55(2)                        --------->ANAC58 -------ANAC55(2)                        --------->ANAC58 -------ANAC46                           --------->bZIP60(2)          <---------ARR11(3) ----TEIL                                =================bZIP_DOF    --------->ARR11(3) ---->CCA1(2)                            <---------TGA1a              <-----------ARR10 --->ARR14(2)                            --------->ANAC46  <-----------GT1                       ---- ----ARR14(2)                       <-----------GT1<---------ANAC46  <---------CCA1(2)           ---- -HSFB2a(2)                      ------->TEIL  <----------DOF2--------->TOE2(3)                 ----- >HSFB2a(2)                 ----------------------->TaNAC69(2)--------->TOE1(3)    <----------DOF2   acgtagatgtaacgagttggactaaatgatgtatgaattttccacgtccctttgcctatatataccttcacatatctcatcacttctttcacaactcaac  22216900                                                   --------->AHL20(2)                     <---------ICU4                                                  <---------AHL20(2)          <---------AHL20(2)                                      --------->AHL20(2)                      --------->AHL20(2)                                      <---------AHL20(2)                      --------->AHL20(1)                                     --------->AHL20(2)                      <---------AHL20(2)                                     <---------AHL20(2)                      <---------ATHB12                                  --------->AHL20(2)                         --------->AHL20(2)   --------->ANAC46     ---------->DOF2        --------->AHL20(2)      --------->ANAC58   --------->ATHB51 --->GAMYB   <----------DOF2  ----------->GT1<---------MYB52(1)        --------->ANAC58  --------->ICU4 ----->AtMYB61  <---------ANAC58  <---------AHL20(2)      <---------AtLEC2   <---------ATHB51 ---->MYB46(3)  <---------ANAC58 --------->AHL20(2)<---------AHL20(2)---------->DOF2     <---------YAB1   catctccacaatattctttcgtttgagaaagaagattaaattaattcgtttatttattttgcaagaagagagaaagcaaataatttgtttcattatttca  22217000                                                          --------------->AtSPL3                                                          <---------------AtSPL8                                                        <------------CBF                                                      <---------AHL20(2)                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                   --------->TOE2(3)                                                   <----------DOF2                                                --------->AHL20(1)                                  -                  <-------TEIL                  <---------AHL20(1)                                  <               --------->At4g35610              --------->ARR11(3)                                 --               <---------At4g35610             --------->RVE1(1)                                 ----         <---------AHL20(2)                    --------->CCA1(1)                                <----         --------->AHL20(2)              --------->AHL20(2)   <-------TEIL                      -----        --------->AHL20(2)              --------->AHL20(2)--------------->AtSPL8           ----------        <---------AHL20(2)     <---------TOE2(3)<---------ARR11(3)                  ---------->DOF2<-   tatttgaaaatttaatcagcttcattcgatattaagaaacaaataaaaaatatctttaaattggtacattttcttctcttatatatcaaagttatgttat  22217100 -------->ATHB12 ---------ICU4 ------->ICU4                                         --------->ARR11(3) ----->YAB1                          --------->AHL20(2) -----YAB1                         <---------GLK1(2)  <---------ARR11(3) ---->ICU4               <------------CBF  --------->ARR11(3)                                  <----- ->GT1     --------->GLK1(2)    <-----------RAV1(2)  <---------CCA1(2)                     <XXXXXXXXX --------YAB1         ------------>CBF   <---------AHL20(2)                        ---------->DOF2   aatgattttagaaattctcttgtgatcaattggctcagattatataatcttgtttatatcttatgtagatttataagttttctgcaaaagcccttataaa  22217200                                     ------->GAMYB                                    --------->MYB46(3)                                              <                                    <---------MYB55(2)                                            <--                                    <---------MYB52(2)                                 <---------ANAC46                 --------->At5g28300<---------MYB111(2)                                <---------ANAC58        --------->YAB1   --------->At4g35610                      <---------AHL20(2)   <---------ANAC58      ------------>CBF   <---------At4g35610             --------->ARR11(3)   ------------>CBF  ----- ------GT1----------->TGA1        ----------->RAV1(1)    <---------ARR11(3) ----------->HVH21   <---- XXXXXXXXXXXMIR867     --------->ZAT18      <---------ALFIN1     --------->AHL20(2)  <---------ANAC46   ccattttcaacaatgacgcagtaagtgagcaaactccaacaaacaaacacttctctacaaatctttataaaatagtttctgacaattttgtgtgttaatt  22217300                                                                    ----------------->AGL1                                                                   <-----------------AGL1                                                                 --------->GLK1(1)                                                          <---------HSFB2a(2)    <---------At4g35610     <---------HSFB2a(2)                             <---------GLK1(1)           --------->At4g35610     --------->HSFB2a(2)                             --------->GLK1(1)        --------->SPL7   <-----------GT1                                  <---------GLK1(2) <---------DAG2<-------TEIL ---------ICU4          --------->HSFB2a(2)         --------->ARR14(2)<----------DOF2  <---------At4g35610 -------TOE2(3)         <---------HSFB2a(2)     <------ZmHOX2a(2)<---------GLK1(1) <----------DOF2 ---->AHL20(2)        ------->TEIL         ------>NtERF2  --------->HSFB2a(2) <-------TEIL--------->At4g35610 -----AHL20(2)  --------->GLK1(2)       --------->SPL7   <---------LBD16  --------------->AtSPL3   aatatttacagaaggaagaatatgtactcgaagaaaaactcgttcggccgatcagatttcccagagggtttccttttcggtacagcttcatcggcttacc  22217400                              <------ZmHOX2a(1)                           <---------HSFB2a(2)                           --------->HSFB2a(2)                         --------->HSFB2a(2)                         <---------HSFB2a(2)                    <---------HSFB2a(1)                    <---------ZAT2                    <---------At4g35610                    --------->HSFB2a(1)                    --------->HSFC1(2)                    <---------HSFC1(2)                             --------->LBD16               <---                   ------->TEIL                                --------->ARR11(3)            <-------                   ----------->ARR10                          --------->GLK1(1)              <-------             <---------ARR14(2)                              <---------ARR14(2)            ------>MYB46(1)             --------->ARR14(2)                              --------->ARR14(2)            ------>MYB83      <------ZmHOX2a(1)  ------>ZmHOX2a(1)          <---------MYB46(3)  ----------->GT1  <---------MYB59   aatatgaaggagccagaaacgaagctcctcgaggagagagtgtttgggacacatttgttcgcaaatatccaggtttgtatataactaaaaacctactttt  22217500                                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                              <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <-                                <---------YAB1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                ----       --------->MYB59--------->YAB1       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  -----       <---------TOE2(3)     <---------YAB1<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <----  --------->ICU4<---------AHL20(2)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  ------- --------GT1   --------->AHL20(1)        <------------------------ANAC81              ----------->GT1 ---DOF2       <---------AHL20(1)     <----------DOF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------YAB1 --DAG2<---------TOE1(3)   ----------->GT1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ARR11(3)<---   tgcaatatttaggtttatatattttcatattgttattcttctttttttttttttttttttttttttttttttttttgtcaaggtcatattgttattcaat  22217600                                                                           <---------ATHB12                                                                          --------->ANAC58      --------->YAB1                                                      --------->ANAC46     <-------TEIL                                                         ------>MYB46(1) <---------ARR11(3)     --------->AHL20(2)                                ------>MYB83 --------->ARR11(3)     <---------AHL20(2)                                --------->ANAC58 --------YAB1       --------->AHL20(2)                               ------>NtERF2 ----->YAB1         <---------AHL20(2)                              --------->LBD16          -------- ---->ICU4---------->DOF2 <---------TOE2(3)                        <---------ANAC58          <------- -----ATHB12      --------->TOE2(3)                                <---------ANAC58       --------->YAB1 -->WOX13(1)      --------->TOE1(3)                               <---------LBD16      --------->HSFB2a(2) ------ICU4       <----------DOF2  ------->TEIL                ---------->DOF2         <---------HSFB2a(2)   catgatattcatcaaagtaactttaattaatgaaatgaacattttgtagagagaaattgctactctaatgcggaccaagcaatcgagttctataaccatt  22217700                                                                                   --------->ARR11(3)                                                                                <---------TOE1(2)                                                                             --------->TOE2(1)                                               --------->GLK1(2)             --------->ANAC46                                              <---------GLK1(2)              --------->TOE1(1)            --------->LBD16            <---------ANAC58                     ------>ZmHOX2a(1)       <---------GLK1(1)--------->ARR11(3)    --------->ARR14(2)        <-----------GT1  <------ZmHOX2a(1)    <------ZmHOX2a(1)<----------DOF2            <------ZmHOX2a(1)     --------->At4g35610 ------->AGL15       <---------TOE2(3) <---------ANAC58        --------------------->WRI1<---------At4g35610 --ICU4--------->GLK1(1)<---------ARR11(3)    <---------ARR14(2) <---------TOE1(2) <---------ARR11(3)   acaaggacgatatccagagaatgaaggatattaacatggatgctttcagattctctatctcttggcctaggatttttcctcgtaagttcttagctcataa  22217800  Previous    Next  AGI:  At3g60120.1    Description:  glycosyl hydrolase family 1 protein. similar to PEN2 (PENETRATION 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79824.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 22217322    to: 22219927    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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