Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->AHL20(1)                                                                      ------->GAMYB                                                                      ----------->RAV1(1)                                                                     --------->MYB46(3)                                                                   --------->WOX13(1)                                                                 <<<<<<<<<WRKY6                  ----    ----------->GT1                                        <---------AHL20(2)   <---------AHL20(2)   <-------TEIL            <-----------GT1                --------->AHL20(2)   --------->AHL20(2)---- -------GT1--------->AHL20(2)                    ------>NtERF2   --------->WRKY18(1)--------->AHL20(2) -->AHL20(2)    ---------->DOF2                 --------->DEAR3(1)<---------WRKY38(1)            ----   acaaattcgtaaataaaacaaagtcaaattcacctccaaaggttaagtcgacgacctatattatatagtcaaccacatatattaaataaaacatcgctca  22201400                                                                                                    -                                          <---------AHL20(2)                                    <----                              --------->AHL20(2)                                                <----                              --------->YAB1                                              <---------YAB1                          --------->AHL20(2)                                 <-----------GT1    -----                          <---------AHL20(2)                             --------->AHL20(2)     <---- ----->ANAC46           --------->ANAC55(2)   --------->AHL20(2)  ----------->GT1   --------->AHL20(2) ----->ANAC58         <-----------GT1    <---------WOX13(1)    --------->At4g35610  <---------AHL20(2) ----->ANAC58  ------->TEIL   <---------AHL20(2)          --------->YAB1 <---------AHL20(2) <--------   cgccatctactcatatgtatgtttttacttaattatatagctaattgattatatgatatatcatcagttggaaaattaaaaaccattttattccgatagc  22201500                                          <-----------GT1                                     --------->AHL20(2)                                     <---------AHL20(2)                                    <---------AHL20(1)          --------->ARR11(3)        --------->AHL20(1) --------->DOF2          --------->AHL20(2)                                     <-------TEIL -----ANAC58             <---------AHL20(2)                                  <------MYB83 -----ANAC46     <----------DOF2    --------->AHL20(2)                       --------->At4g35610 ------>GT1<------ZmHOX2a(2)        <---------AHL20(2)    --------->DAG2     <---------At4g35610 -----ANAC58 --------->KAN4(2)  <---------YAB1           ---------->DOF2     <------MYB46(1)<-------- -MYB52(1)<---------ARR11(3)  <-----------GT1      <---------MYB46(3)       --------->MYB59 <--------   gtaaaagaaacagatcattctttttgtttaaattacaatttatttaactcaagttgttgaaaagtgtgtaatggaaggcaggtccatagctatttcgtct  22201600                                                                         --------->AHL20(2)                                                                         --------->YAB1                                                                      --------->YAB1                                                           <-----------GT1    ----------->GT1                                               <---------YAB1       ------>MYB46(1)                                            --------->AHL20(1)      ------>MYB83      <-----------GT1     ---------->ID1    --------->AHL20(2)      ------------>CBF <---------AHL20(2) <---------YAB1          <---------AHL20(1)   --------->MYB46(3) -ANAC58      <---------YAB1    <---------TOE2(3) <---------TOE2(3)----------->RAV1(1)         ------ -ANAC58     <-----------GT1<----------DOF2 <---------AHL20(2) --------->ANAC46       <-----------GT1   tatatttttaactattttcattttgtttgtctttaagaaatagtattttattaatgtttttttacaaaccaacaataaaactgtatattcacattttgtt  22201700                                                                                                 ----                                                                                                 <---                                                                           ------------------------>ANAC81                                                                          <---------GLK1(1)      ----          <---------AHL20(2)                                          --------->TOE2(3)          <---          ----------->TBP                                             --------->TOE1(3)          ----        ----------->TBP                   <---------CCA1(2)     --------->ANAC58    ----------->GT1    <---------ANAC46            ----------->RAV1(1)             --------->ANAC58    <----------ID1  <---------ANAC46             --------->ANAC46                 --------->ANAC46  ---------->DOF2---- ---->ID1 --------->AHL20(2) --------->ANAC46           ------------>CBF  --------->GLK1(1)      <---   ttttttgtgtatatatatagagacatataatccacaacatatgcatatcatttcccaaaacaatacaagaaacctgaaatccaaaaaagaaaaacccaaa  22201800                                                                                                  <--                                                                                       <----------DOF2                                                                                      --------------- ----->GLK1(2)                                                         --------->At4g35610   -------- ------ARR14(3)                                                     ================HOX2a_HOX2a   --- ----->ARR14(3)         --------->TOE2(3)                           <------ZmHOX2a(2) <-------------- --------ARR10         <---------ANAC46                            --------->ARR11(3)---------------- ----->ARR14(2)       <---------TOE2(3)                            <---------ARR11(3)<--------------- ----->ARR11(3)      <-----------GT1     --------->GLK1(2)--------->SPL7             <--------------- ------ARR11(3)  <----------DOF2----------->GT1       <---------------AtSPL3 ------>ZmHOX2a(1) <-----   atcttcgcttcttcatcttctttttacgtttatatggtgagaaattctatgaaggctgagtacgatatagatcatcttcctcatcaaaccttttatggtg  22201900                                                                   <---------CCA1(2)                                                                  --------->LBD16                                                                 <---------ANAC55(2)                                                                 --------->ANAC55(2)                                                                 <---------ANAC58                                                                 <---------ANAC55(1)                                                                 <---------ANAC58                                                                <-------TEIL                                                                ------>ZmHOX2a(2)                                                               --------->CCA1(2)                                                               <------ZmHOX2a(2)                                                              --------->AGP1                                                              --------->ARR11(3) -------YAB1                                                  --------->ARR14(2) >AGL15                                                       <---------ARR11(3)            <-------- --->GT1                                <---------ICU4        <---------ARR14(2)            --------- ------>ICU4                            --------->YAB1--------->ANAC58                   --------->LBD16 -AGL15                       <---------GLK1(1)       --------->ANAC58        <---------AHL20(2) ->AGL3                       --------->GLK1(1)    <------ZmHOX2a(2)         <---------ARR11(3) --AGL2                      <---------ARR11(3)   <---------ARR11(3)        <---------CCA1(2)<------ZmHOX2a(2) --AGL3                      --------->ARR11(3)   --------->ARR11(3)<---------ARR11(1)  --------->LBD16 ----YAB1    <---------MYB46(3)        --------->AHL20(2)   ----------->ARR10<---------AHL20(1)     <   attattcaaaaactttggttcccatgaacaagaactcccaaataataaccaagatcaagcctaagatccgtatcatccatatatttgctcccgagatcat  22202000                                                               <---------ARR14(2)                       <---------ALFIN1                --------->ARR11(3)                      --------->ZAT14                  <---------ARR11(3)                      <---------ZAT18                 <---------GLK1(1)                  ------>MYB46(1)                     <---------ALFIN1                 --------->GLK1(1)                  ------>MYB83                    --------->LBD16                --------->LBD16                      ----------->RAV1(1)                    <---------ZAT18              <---------LBD16                        =============                    <---------At4g35610        <---------ARR14(2)                      --------->AtMYB61               <---------HSFB2a(1)             --------->ARR14(2)                      ------->GAMYB< -ARR11(3)   <---------ARR11(3)            --------->LBD16     --------->ARR14(2)     --------->MYB46(3) >ARR11(3)   --------->ARR11(3)           <---------LBD16   --------->AtMYB61     --------->ARR11(3)< ---------ALFIN1  <---------LBD16        <---------LBD16<------ZmHOX2a(2)     ---------->DOF2       -   caacaccgatgtcaagaacttccgcacactcgtccaaagtctaaccgggaaaccggagatcaccaaaaccggttctaagaaaaagataaccaacacaaat  22202100                                                                                  <---------REM1(1)             --------->ARR14(2)                                               <-------PIF5           --------->LBD16                                                    <-------MYC3         <---------LBD16                                                      ------->PIF5         <------NtERF2                                                        ------->MYC3        --------->MYB52(1)                                                    ------->MYC2        ------>NtERF2                                                         <-------MYC2       <---------ALFIN1                                                       <-------MYC4       --------->DEAR3(1)                                                     ------->MYC4      --------->ATERF1(1)                                                    --------->bZIP60(2)      ----------->HVH21                                                      --------->O2     ------>NtERF2                                                           --------->TGA1a     <---------ATERF1(1)                 --------->MYB52(1)                  <---------O2     <---------RAP2.3(1)       ------>NtERF2                                 <---------TGA1a    --------->ANAC46          ------>NtERF2                                  <---------ANAC46    --------->ANAC58          --------->LBD16               ------->GAMYB    --------->PIF3(3)    --------->ANAC58         <---------RAP2.6(2)            ===========================MYC_MYB  ------>ZmHOX2a(1)         <---------LBD16              ----------->RAV1(1) <---------PIF3(3) ===========RAV           --------->GLK1(2)     <---------ZAT14            <---------ALFIN1 ---------ANAC58         --------->ARR14(2)    ----------->HVH21         ----------------->PIF3(1) ---------ANAC58         <---------GLK1(2)   <---------At4g35610        --------->PCF2 ---------->RAV1(2)      <---------ARR14(2)  --------->At4g35610 --------->YAB1--------->ALFIN1    <-   tttcctgcgccaccgggtttgcctcaagattccggccaagaacatacggctgaactggacaacagaataatagggagccacgtggtgaaggaagaatggg  22202200                                                                                                -----                                                                   --------->ARR14(2)          ------                                                          <----------ID1                 ------>ZmHOX2a(2)                                             --------->ARR11(3)    <---------ARR14(2)  <---------ARR11(3)                                             <---------ARR11(3)    <---------GLK1(2)   --------->ARR11(3)                       <----------DOF2     ------>ZmHOX2a(2)  ----------->RAV1(1)<---------MYB46(3)-- -----ZmHOX2a(2) <---------ICU4 <-----------GT1------>ZmHOX2a(2) <---------ARR11(3)  ----------->ARR10   gatcaagttcaaacacaaatacttactttgattttgacggtttgatcgatcttgatgaagacgacaacatattctcaagtcgatggtttgatcttcaaca  22202300  Previous    Next  AGI:  At3g60090.1    Description:  VQ motif-containing protein. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT2G44340.1); contains InterPro domain VQ (InterPro:IPR008889) Range:  from: 22201834    to: 22202307    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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