Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ------->TEIL                <---------YAB1    <---------ARR14(2)      <-------TEIL                <---------ARR11(1)                                           <-----    <---------ARR14(2)            --------->GLK1(2)                                      >>>>>>>>>TBF1    --------->ARR14(2)            --------->ARR14(2)                                 --------->At4g35610 ---------At4g35610              <---------GLK1(2)    --------->ZAT18           <---------HSFB2a(2) ------------------->WRI1 --------->LBD16  --------->ALFIN1                     --------->HSFB2a(2) ---ARR11(3) ----------->HVH21   <---------ARR14(1)<------------CBF      <---------TOE2(3)     ------ -->ARR11(3) ----------->TGA1   <------NtERF2     <---------ICU4         <---------TOE1(3)  >>>>>>>>>TBF1   tcatcggattcatcgatgacgatggctccagggccgaatctgagagtgcgactaattgcacagtccccaaaaattagggtttctagcagaagaagaagaa  22192900                                                                                           <---------LBD16                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                       <---------ETT(1)                                                                                       ----------->HVH21                                                                                      --------->DEAR3(2)                                                                                      --------->MYB46(3)                                                                                  <---------ETT(1)                                                                <---------ICU4    ----------->HVH21                                                               --------->ICU4    ------>ZmHOX2a(2)                                                              --------->TOE2(3)--------->ARR14(2)                      --------->AHL20(2)              --------->YAB1           <---------AGP1   <----                      <---------AHL20(2)             <---------YAB1            --------->AGP1--------                      <---------AHL20(1)           --------->YAB1              <---------ARR14(2)                      --------->AHL20(1)       --------->AHL20(2)              <---------ARR11(3)    <-----------GT1  <---------AHL20(2)        <---------AHL20(2) <---------YAB1--------->CCA1(2) ----ARR11(3)        --------->AHL20(2)       --------->AHL20(2)--------->ATHB12<------ZmHOX2a(2)  >> --->ARR11(3)    --------->AHL20(2)   <---------At4g35610  <-----------GT1   ----------->ARR10------>NtERF2   cttaattcactactgaagaaaaaataaatttgttttttgcagataattttaaattatcatattacattattagttagactagatccgacccgacccggcc  22193000      --------->YAB1           --------->ANAC58      <---------ICU4           --------->ANAC58     <---------ATHB12          --------->ANAC46     <---------ATHB51        ----------->RAV1(1) ------------>CBF           --------->ZAT18          <---------ARR14(2)                           --- -----MYB59                 <---------ZAT18          --------->ARR14(2)                           --- ->LBD16            --------->CCA1(2)          --------->ARR11(3)                                 --- >>>>>>>MYB98  --------->ANAC55(2)         ---------->DOF2               <-----------GT1      <------   taacccaattatgtcttacatgatacgaagcccacacaaaaaaaaaaaagatgtggatttgatgggcctgatttaaaaccttctctggcattagtttaac  22193100                                                 <---------ANAC58                                           <------MYB83 <---------DAG2                                           <------MYB46(1)    <---------ANAC58                                   <---------ANAC58     <----------DOF2      ------------>CBF                                   <---------ANAC58  <---------YAB1          --------->MYB46(3) ------>ANAC58                <------------CBF   <---------ANAC46          --------->ANAC58 ------>ANAC46             --------->AHL20(2)    <---------ANAC58          --------->ANAC58 ------>ANAC58          <---------ICU4    <---------AtMYB61   <---------ANAC58           <---------ICU4 -----GT1             ------------>CBF    --------->MYB59     <---------ANAC46   <---------ATHB12   aagccaacttactgagcctggtctaacaattacattgacttggtttggtttgcttatgctttttgcttagattagtccagccaatgaataaacatgtctg  22193200                                                      <------MYB83                                                      <------MYB46(1)                                                     <---------------AtSPL8                                                     <---------MYB46(3)                <---------ZAT6                                                     --------->MYB59                   <---------ANAC46                                                     --------->MYB46(2)                <---------ANAC58                  <----------DOF2                    --------->MYB111(1)               <---------ANAC58             <-----------GT1                         --------------->AtSPL8    ------>ZmHOX2a(2)        <---------YAB1                         <----------DOF2               --------->ARR11(3)       --------->TOE2(3)                  ---------->DOF2              --------->DEAR3(2)      <---------ICU4                    --------->AtMYB61    ------------>CBF<---------ARR14(2)<-----   ttttctcaacattattcacactttcagtttttgtttctcagaccaaaagctttgtttggtactaacaatggctaccgtcgatctcggtagcgttagactt  22193300                                  ----------->HVH21         ---------->DOF2                                 <-----------TGA1     <---------ANAC58                        <------                        --------->DAG2           --------->ATHB12    <------ZmHOX2a(1)        ------>ZmHOX2a(1)                      ---------->DOF2       ----------->RAV1(1)    --------->ANAC58           <------            <---------ANAC58     <-----------HVH21    <---------ANAC58                   <---------ALFIN1 -----DOF2  <---------ANAC58    --------->ANAC46<---------YAB1     --------->ANAC58    ------>ZmHOX2a(1)   ttcagtttttgttttcttgcaagggaaaggctattcgtcaccggtgcaacatgatttcttgccaaaggtaaggaaccagtcttcttctcctccatccttt  22193400                 --------->TOE2(2)                 <---------SPL7                <---------ANAC58                --------->ANAC55(2)                                                                 -                <---------ANAC55(2)                                                          ------>ZmHOX2a(1)                <---------ANAC58                                                        ------>ZmHOX2a(2)                <---------ANAC46                                                       =============HOX2a_HOX2a               <---------TOE1(2)                                                       <------ZmHOX2a(2)               --------------->AtSPL3                                                 <---------ARR11(3)          --------->ARR11(3)                                                          --------->ARR11(3)          <---------ARR11(3)                                                          --------->ARR14(2)      --------->WOX13(1)                                                              <---------ARR14(3)  --------->ANAC58 --------->SPL7                                                     <---------ARR14(2)  --------->ANAC58 ------->TEIL                                                       --------->ARR14(3)  --------->ANAC46 <-------TEIL                                                <---------ANAC46     < ----DOF2--------->YAB1              <----------DOF2                      <---------MYB46(3)--------- ---DAG2<---------ATHB12 --------->AtLEC2      ---------->DOF2<---------AHL20(2)    ----------->ARR10   ttgcaagccaattatcttacgtacgtcttgcaaaactgacttttgacttgaaagttgtgcaggttttattgagaagttgttgagggaagatcgtccttgt  22193500          --------->YAB1         --------->ICU4                                                                           ---         <---------ATHB12                                                                        <--- ---------->DOF2                                                                                ----- -------->AHL20(2)                                    ------>ZmHOX2a(1)                         <---- ---------AHL20(2)                --------->GLK1(2)  --------->TOE2(3)                     --------->MYB52(1) ------------>WRI1 --------->At4g35610   <-----------GT1               <---------At4g35610 ----------   aattaaagccaatgatcaagaagcagccaagaagagactctatttccaattccatccttcaattcttgtatacatctccctcactagttttcccaacaga  22193600           ------>ZmHOX2a(2)         <---------AGP1         <-----------ARR10         <---------ARR14(2)         --------->ARR14(2)        <---------CCA1(2)                                                         <---------MYB46(3)   --------->ZAT2                       ---------->DOF2              ----------->GT1 ------>YAB1                  ---------->DOF2             <---------ANAC58      <---------MYB52(1) ---ZmHOX2a(2)             --------->ANAC58               <---------ANAC58    --------->HSFB2a(2) ---->ARR11(3)        --------->At4g35610              <----------DOF2        <---------HSFB2a(2) -----ARR11(3)        ----------->RAV1(2)        <---------YAB1      --------->ANAC58             <-- ->RAV1(1)<------ZmHOX2a(2)--------->ANAC58    <---------At4g35610   --------->ANAC58     --------->ARR11(3)   tcataagctcggatctattcaagcttctgaagcaaaggcatggaaagtcatatgatactttcttgaagagcaagttacttccagtagttgaagacattgc  22193700               --------->ZAT18                                                         --------->WRKY12               <---------ZAT18                                        <---------At4g35610 --------->ANAC46              --------->ALFIN1                                    --------->ARR14(2)   ----------->HVH21            <---------ANAC58                                  <---------YAB1         <----------DOF2            <---------ANAC46                                <---------ICU4       <---------ALFIN1            <---------ANAC58                               --------->ICU4     --------->AtMYB61     --------->ARR11(3)                                    <---------YAB1--------->At4g35610     ----     --------->GLK1(2)                                   --------->YAB1  <---------At4g35610     <---  --------->ARR11(3)                          <------ZmHOX2a(1)   <---------ARR14(2)--------->TOE2(3)  <---------ARR11(3)           --------->ANAC58         <---------YAB1--------->At4g35610 --------->bZIP60(1) -------At4g35610              --------->ANAC58   <---------WOX13(1) <-----------RAV1(1)  --------->ETT(2)   agaagataatcttggggtggactctgaaacatcactcaagattagtgaggagattgatatcattatcagttctgctgctaccacaacctttgacgacagg  22193800  Previous    Next  AGI:  At3g60060.1    Description:  contains InterPro domain Male sterility, NAD-binding (InterPro:IPR013120) Range:  from: 22193268    to: 22194055    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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