Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  ---                                                                                              <------                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC46                                                                                           <---------ANAC55(1)                                                          <---------AHL20(2)               <---------ANAC58                                    >>>>>>>>>>WRKY26   <---------AHL20(1)                  <---------ANAC58               <---------TOE2(3)    >>>>>>>>>>WRKY43   --------->ARR11(3)            --------->AHL20(1)             ---------->DOF2        >>>>>>>>>>WRKY38   <---------ARR11(3)            --------->AHL20(2)        --------->AHL20(2)         ----------->HVH21   --------->AHL20(1)            <---------AHL20(1)      ----------->GT1   <---------ANAC55(2)          ------->TEIL                    <---------AHL20(2) ---------->HVH21     --------->AHL20(2)          <---------YAB1        ---------->ID1     <---------ANAC55(2)   atatgaccaagttaataaaggaaattacataaactagatgaccaagtttgatatgaatatttttttttttttttgtcgtcaaactattttattacgtgaa  22190300                                                                                           --------->O2                                                                                           <---------O2                                                                                      --------->ANAC46                                                                              <---------ARR11(3)                                                                              <<<<<<<<<<GT-1        <                                                                     ------>MYB46(1)  <---------ANAC58 ----------HVH21                                                     ------>MYB83     <---------ANAC58 -------->GT1              --------->AHL20(2)                        --------->ARR14(2)<-----------TGA1 ---ZAT14           ----------->RAV1(1)<---------ARR11(3)            <---------ARR14(2)<-----------HVH21   ctgtcaaatacaagatgaagtccaacaaattacatagtcaagaccattacatcgagcctgttttgctaacctatctgctatatcatttgcgtcacgagaa  22190400                                                     <------MYB83                                             <---------ZAT2                                             --------->ZAT2                                             <---------At4g35610                                   --                   ---------->DOF2        --------->TGA2(2)                                        --              --------->At4g35610        <-----------HVH21                                         <-           ---------->DOF2    <---------ARR11(3)     <------MYB46(1)  <-------TEIL                 <-       ----------->GT1        --------->ARR11(3) <---------STY1(2)--------------->AtSPL3      -------      --------->DAG2        <---------TOE2(3)--------->At4g35610  --------------->AtSPL8     --------     ---------->DOF2    <----------DOF2 --------->ANAC58          <---------------AtSPL3    <-------- ---------YAB1<---------At4g35610       --------->ANAC58          <---------------AtSPL8    ---------   atatgaataaagttaaagctgcaaagctttgagattttaagaacgtcagctagataggttgcaatatggaggtacttccatgatgcattgtttccccgta  22190500                                                   <---------bZIP60(2)                                                   <---------ANAC46                                                ----------->HVH21                                              ----------->GT1                                        <---------At4g35610                                        --------->LBD16                                        --------->At4g35610                                       --------->ANAC46                                      <---------LBD16                                    ------>ZmHOX2a(2)      <----------DOF2              --------->GLK1(1)   <-----------ARR10               <---------GLK1(1) ------->ZAT18                     <------ZmHOX2a(2)                              <---------ARR14(2) ------->ZAT14                    <---------ARR14(2)                              <---------ARR11(3) --------ZAT14              --------------------->WRI1                            --------->ARR14(2) --------ZAT18    --------->YAB1  --------->ARR11(3)                         <------ZmHOX2a(2) -->LBD16      <---------CCA1(2)  --------->ARR14(3)                        --------->ARR11(3) ->ANAC46      <---------ARR14(1) <---------ARR11(3)                        <---------ARR11(3) -LBD16      <---------ANAC46     --------->ARR14(2)                <---------WRKY38(1) >LBD16     <---------At4g35610   <---------ARR14(3) ----------->GT1<---------ETT(2)   gtgcacatctttgcagcgtatcatatatgagcttgagatctccgcagaatgtgacatgtgaataacccagtcgacgaagatcaagaactgcaagacgaag  22190600                                <---------ANAC58                                <------MYB83                                <------MYB46(1)                                <---------ANAC58                                <---------ANAC46                               <---------MYB46(3)                               <------MYB46(1)                               --------->MYB55(2)                               <------MYB83                                               ------>MYB46(1)                <-------GAMYB<--------P                                                   ------>MYB83               <-----------RAV1(1)                        <---------ARR14(2)             --------->ANAC58    <---------At4g35610      <<<<<<<<<MYB98               --------->GLK1(2)              --------->ANAC58    --------->At4g35610     <-------GAMYB                 --------->ARR14(2)            --------->MYB46(3) <---------ATERF1(1)   <----------DOF2       --------->ANAC46                    <---------AtLEC2   ggcctccgcttcggcttctgttggactttgggttgggtgtatagcacccgaaccatgaagtatctgtgttccatccctattatgcagggaccagccaatt  22190700                 --------->GLK1(1)               <---------ZAT18               --------->ZAT14            <------MYB46(1)            <------MYB83           <---------MYB46(3)               --------->MYB52(1)          <---------MYB52(1)               ------->GAMYB                                <----------DOF2  <---------ARR14(2)                      <---------MYB52(2)                  <---------ANAC58  --------->ARR14(2)                      --------->MYB46(3)                  <---------ANAC58  <---------GLK1(2)                    <----------ID1         <---------YAB1  <---------ANAC46 <-----   cccatattctcagttggtgaactccatgaggcatcaacaaaacaacaaactgaccaagtttgatatgaataaactagatgacttgtgcgactttggaaat  22190800                                                       --------->CCA1(2)                                              <---------HSFB2a(2)                                              --------->HSFC1(1)                                              --------->HSFB2a(2)                                <---------AHL20(2)    --------->ARR14(2)          --------->AHL20(2)   <---------AHL20(2)     <---------ARR11(3)          <---------AHL20(2)   --------->AHL20(2)     <---------GLK1(2)        <-----------TBP        --------->AHL20(1)     --------->ARR11(3)   <---------At5g28300    ------------>CBF           <---------AHL20(1)     <---------ARR14(2)   <-----------GT1   --------   ----------->GT1 <----------DOF2      ------>ZmHOX2a(1)   --------->ZAT6<-----------GT1    <------- -------CBF        <---------DAG2   <-----------GT1 ----------->ARR10  <---------ICU4  <----------DOF2   tggaatggcaatttatatgagcttttttaaaaatttattctccttcttctagataagatttgccactacttcatttttaccccttcatgctttaaatcaa  22190900                                                                 --------->ARR11(3)                                                                 <---------AHL20(1)                                                                 --------->AHL20(1)                                                              --------->AHL20(2)                                                   <---------------AtSPL8                                                   --------------->AtSPL8                --------->REM1(1)        --------->DAG2                          <---------AHL20(2)              --------->TOE1(3) ---->CBF                             <---------YAB1   ------->TEIL<------------CBF <-----------GT1 --ATHB12<------------CBF   <------ZmHOX2a(1) --------->ICU4  <---------AHL20(2)--------->TOE2(3)----   ttttagtcaaaaattggaatacaagatggaggatgagattattttggaatttttatgtacttaaaaaaatattgtgcaaaaactttaaactacatctaat  22191000                                  --------->ANAC46                                  --------->ANAC58                               --------->ARR14(2)                               <---------ARR14(2)                            <------MYB46(1)<---------At4g35610                            <------MYB83   --------->At4g35610     --------->MYB52(1)    --------->MYB59------->TEIL                                            --- ----->YAB1     <---------AHL20(2)--------->ANAC58   ---------->DOF2  <---------MYB46(3)          <--   tagaaacagacggactatatttttgtaatttggtatacgcactgcatctgagaacaaaagtctaaatacgagtcgttgtgatatcgaagagaaattcttc  22191100                                                                               --------->MYB46(3)                                                                        <----------ID1                                                                  --------->LBD16  --------->TOE1(3)       --------->ANAC58                                          <---------HSFC1(1)<---------MYB59       --------->ANAC58                                          --------->HSFC1(1)--------->TOE2(3)     ---------->DOF2                                             <-----------RAV1(2)   <<<<<<<<<WRKY18                                               --------->HSFB2a(2) <-----------HVH21                    <----------DOF2      <---------TOE2(3) --------->ANAC46 ------>At4g35610                  <-----------GT1        ---------->DOF2  --------->MYB46(3)      -- -------At4g35610           <----------DOF2  ---------->DOF2     <---------HSFB2a(2)      <----------   atctgtcaaaagcccctactaatattctctctttttttttcttttgtaaaagagaagaattaaagttccagaagagaacaaacaacctaaattaacaaaa  22191200  Previous    Next  AGI:  At3g60040.1    Description:  F-box family protein. Identical to F-box/LRR-repeat protein At3g60040 [Arabidopsis Thaliana] (GB:Q8GWI2;GB:Q9M1D9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G06630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17247.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 22186914    to: 22190705    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version