Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->DREB2C(2)                          ----------->HVH21                         --------->DEAR3(2)                      --------->WRKY38(1)                      --------->WRKY12                      ----------->HVH21                     <-----------HVH21                    <---------DEAR3(2)                 <------MYB83                    --------->LBD16                    <------MYB46(1)                    <---------At4g35610               --------->MYB111(2)                    <---------ATERF1(1)               --------->MYB59                    --------->At4g35610               --------->MYB46(2)                   --------->DEAR3(1)              <---------MYB46(3)                  <------NtERF2                    --------->MYB55(2)                --------->ANAC46                  --------->ALFIN1                  --------->MYB52(1)               ------->MYC3                       <---------AtMYB61                 ------>MYB83               ------->PIF5                  --------->MYB52(1)                     ------>MYB46(1)               <-------MYC3                  <---------DOF5.7(2)                  <---------MYB111(2)               <-------MYC2                <---------MYB52(1)                     <---------MYB59               <-------PIF5                ----------->HVH21                      <---------MYB111(1)              --------->ANAC58             --------->DOF5.7(2)                  ------>MYB83              <---------ALFIN1            <-----------HVH21                     ------>MYB46(1)              ====================================MYC_MYB                     <---------MYB111(1)              ================================================MYC_MYB   --------->At4g35610              --------->ANAC46            <-------GAMYB--------->ANAC55(2)    <---------MYB46(2)              --------->ANAC58            <---------RAP2.6(3)    <---------PCF2 -------->P <---------ANAC46------>NtERF2          ----------------->AGL1--------->ALFIN1<---------MYB59 ---------LBD16------->MYC2----------->RAV1(1)   <---------MYB52(1)     <---------At4g35610     <---- ---------At4g35610<---------DEAR3(1)  <---------At5g28300  <-----------RAV1(1)--------->MYB55(1) -----REM1(1) <---------TGA1a       <---------GLK1(1) --------->MYB111(1)     <---------MYB111(2) -GAMYB       --------->TGA1a      <---------ARR14(2)<--------P  <---------ANAC46 <---------MYB46(2) --MYB46(3) <---------ALFIN1       --------->ARR14(2)<---------MYB55(1) --------->ZAT2       <-------   gtagcggatgatacccacgcgccggtgaccgacagtggatttgccgttaccggtggtaggtaatgtggggtcgtagctcacctacctaactaaattttct  22161800                                                                     <---------YAB1                                                                     <---------------AGL15                                                                    <-----------------AG                                                               <---------AHL20(2)                                                              --------->AHL20(2)                                                           ----------->GT1           --------->AHL20(2)                                                           <------ZmHOX2a(1)     ----------->GT1     <---------YAB1                                       <----------ID1       ---------->DOF2    <---------TOE1(2)                                     ----------->GT1  <---------TOE2(3)  -------    <---------TOE2(2)    >>>>>>>>>>GT-3b               ---------->DOF2  <---------YAB1       -------- ------DOF2   ----------->GT1                      <---------TOE2(3)<-----------------AGL1 <---------HSFB2a(2) ----GT1  --------->MYB52(2)                     ---------->DOF2   <-----------GT1----------->GT1   -   ttttcttatgtttagttggaaaataagaaaaatataaaaactagttttttgtaaaggaaaaggataaaattactattatggaaaagataaattccaaaag  22161900                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                       <----------DOF2       --------->ANAC55(2)                                               --------------->AGL15     --       <---------ANAC55(2)                                     --------->GLK1(1)   <---------GLK1(1) <------ZmHOX2a(1)       --------->DAG2                       --------->ARR14(2)   --------->GLK1(1)< -->DAG2                ---------->DOF2            --------->ANAC55(2)   <---------------AGL15     -- -->DOF2  ------->TEIL--------->YAB1               ----------->GT1      <-----------------AGL2     <- ---------->GT1       --------->AHL20(2)           <---------ANAC55(2)  <-----------------AGL3    ---   tgaggaaatatgtatttagcacaataaaaagtgatagcaatgtgagaaaaaaaacgtgataacagaaatgctgtgctaaatttggatttctttgttgaaa  22162000               --------->ICU4                                                        --------->AHL20(2)          --------->YAB1                                                         --------->AHL20(2)    <---------AHL20(2)                                                           <---------YAB1    <-----------GT1               ----------->GT1                                <---------AHL20(2) --------AHL20(1)                --------->DAG2                                 --------->AHL20(1) ------->AHL20(1)          --------->YAB1                                       <---------AHL20(1) --------AHL20(2)      <---------AHL20(2)                                       --------->AHL20(2) ------->AHL20(2)    <---------ANAC55(2)                                        <---------AHL20(2) ---------AHL20(2)   ----------->GT1                                         --------->AHL20(2) ------->ARR11(3)    --------->ANAC55(2)                 ----------->GT1 ----------->GT1 --------ARR11(3)--------->AHL20(1)----------->GT1     --------->REM1(2) <---------YAB1       ------- ------>AHL20(2)<---------ICU4  ---------->DOF2       --------->ALFIN1 --------->YAB1<---------AHL20(2)   atatatttacattgataaatattatgtaattagaaaaaggaaaattcaaaatagatgtgtagaaaaacaacaatgttgataatataattttttatctaaa  22162100                                   --------->GLK1(1)                                   <---------GLK1(1)                                  <---------ARR11(3)                                  <---------AGP1                                  --------->ARR11(3)                                 <---------CCA1(2)                            <---------MYB46(3)                            --------->MYB111(2)                                                   *TSS                       ---------->DOF2                                                         ------   <---------At5g28300--------->AtMYB61   --------->YAB1            --------->ATHB12           ------  <-----------GT1 --------->MYB46(3)   <---------CCA1(2)       <---------YAB1                -------- --->DOF2        <---------At5g28300------>ZmHOX2a(2)      ----------->GT1                   <-------   gtttttaccggttaccagttaccaccaaagttgttggatctctatcttcatttttagagattagtataaatgagtgagtaaacaaaccagagagaccaaa  22162200                                                   <---------ARR14(2)                                       ------->TEIL--------->ARR14(2)                          <-----             --------->AtMYB61         --------->GLK1(2)                                      <------             <---------ALFIN1          <---------ARR11(1)                                     -------          --------->AtMYB61            --------->ARR14(2)  ------>ZmHOX2a(2)          <--------P       --------->ANAC46               <---------ARR14(1)  <---------GLK1(1)           <---------WOX13(1) <---------ANAC58                  <-----------------AGL2<---------ARR11(3)           <-------------- <---------ANAC58   ------>ZmHOX2a(1) <---------GLK1(2)  --------->ARR11(3)          <-------GAMYB >MYB46(1)--------->DEAR3(1)       ----------------->AG <---------CCA1(2)           --------->MYB55(2) >MYB83<---------ALFIN1  <---------MYB59     --------->ARR14(2)                     ----------->GT1<- ->AtMYB61<---------ALFIN1 ------>MYB83<---------ARR14(2)<---------AGP1             <---------MYB46(3) --MYB59 --------->MYB46(3)------>MYB46(1)   <---------ARR14(2)                    --------->ALFIN1--   cttgcctctccaccaccacttcctctacctatctaattccgaatctggatttggatttggatctcatttcgattcaacgatgaaggtggttgataagatc  22162300       <---------ANAC46       <---------bZIP60(2)      <-----------------------TaNAC69(2)     --------->MYB52(1)    ----------->HVH21    ----------->TGA1   <-----------HVH21   --------->LBD16  <---------ANAC55(2)                                                         --------------------->WRI1  <---------ANAC58                                                            <----------DOF2  <---------ANAC58                                                       <---------ARR14(2)  --------->ANAC55(2)                                                    --------->GLK1(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                   <---------GLK1(2) -ZmHOX2a(2)                                     --------->DEAR3(1)  <---------HSFB2a(2) ---ARR11(3)                                  <---------ALFIN1       --------->HSFB2a(2)          <-- -->ARR11(3)                     ------>ZmHOX2a(1)                 <------NtERF2                  <-- -------WRI1              <----------DOF2    --------->MYB46(3)  <---------ANAC58                <--- --------ARR14(2)       --------->At4g35610<-----------GT1       <---------ANAC58             ------- ------->ARR14(2)   --------->MYB52(1)    <-----------GT1        <---------ANAC46            ------>ZmHOX2a(2)   aaatccgtgacggagcaaggccaaacagctttctccttcgagtttttcccaccgaagacagaagatggcgtcgagaatctctttgaacgaatggatcgat  22162400                                                 <---------ALFIN1                                                ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)                                              <---------ARR14(2)                                        <---------AtMYB61                                       <---------ANAC58    ------>ZmHOX2a(2)                                       <---------ANAC58    ==============================HOX2a_HOX2a                                      <---------At4g35610<-----------ARR10              ------>MYB46(1)         <---------ZAT2 --------->At4g35610          <------ZmHOX2a(1)            <---------MYB59          --------->ALFIN1<---------ZAT2            --------->HSFC1(1)            <---------MYB111(1)      <---------AtMYB61   <---------ARR11(3)    --------->HSFB2a(2)            <---------MYB46(2)     <---------ANAC58  <---------At4g35610       <---------HSFB2a(2) ----MYB46(1) -------->P --------->bZIP60(1)  --------->ARR14(2)            <----------DOF2 ----MYB83  <---------MYB111(2)    <---------ANAC58  --------->ZAT2        <---------ANAC58         < ------AtMYB61------>MYB83         <---------ANAC46<-----------RAV1(2)     <---------ANAC46     ----- -->ATHB12------->TEIL   <---------bZIP60(1)<---------MYB46(3)             <---------ANAC58     <----   tggtctcttatggacctaccttctgcgatatcacttggggtgctggtggatccacagctgatctcactctcgagattgcttctaggatgcagaatgttat  22162500                                                                                     <---------GLK1(1)                                                                               --------->MYB52(1)                                                                           <---------AGP1                                -------->P               --------->ANAC58  --------->AGP1  <---------GLK1(2)           <---------YAB1       ------>MYB83             --------->ANAC58  --------->ARR11(3) ---------ANAC46  <---------At4g35610                    <---------ANAC55(2) ------>ZmHOX2a(2) ---->At4g35610   --------->At4g35610                    --------->ANAC55(2)<------ZmHOX2a(2)    <--- -----At4g35610  ------->TEIL   ------>MYB46(1)   <---------WOX13(1)       <---------ARR11(3)    <---   ctgcgtcgagactatgatgcatctcacttgtaccaacatgccgattgagaagattgatcacgcgcttgagacgattagatctaatggaattcagaatgtg  22162600                    ------>ZmHOX2a(1)                 ------>ZmHOX2a(1)               ------>ZmHOX2a(2)                                         --------->ARR11(3)              <------ZmHOX2a(2)                                          <---------ARR14(2)              =============HOX2a_HOX2a                              <----------DOF2             --------->ARR14(3)                          --------->GLK1(1)             <---------ARR14(3)                          <---------GLK1(1)             <---------ARR14(2)                         --------->ARR14(2)             --------->ARR11(3)                         <---------ARR14(2) ------>ZmHOX2a(2)            --------->GLK1(1)                          ===========================HOX2a_HOX2a            <---------GLK1(1)                          <------ZmHOX2a(1) --------->ARR14(2)           ----------->ARR10                        <------ZmHOX2a(1)    <---------AGP1          <------ZmHOX2a(1)                         ==============================HOX2a_HOX2a  <---------------AGL15                    <---------TOE1(3) <---------ANAC58            <-------TEIL ------ANAC58--------->ARR14(2)            <---------TOE2(3) <---------ANAC46       --------->YAB1 ------ANAC58<---------ARR11(3)           <-----------RAV1(2)<---------ANAC58----------->GT1   cttgctcttagaggagatcctcctcatggacaagataagtttgttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagca  22162700  Previous    Next  AGI:  At3g59970.1    Description:  MTHFR1 (METHYLENETETRAHYDROFOLATE REDUCTASE 1); methylenetetrahydrofolate reductase (NADPH). Identical to Methylenetetrahydrofolate reductase 1 (MTHFR1) [Arabidopsis Thaliana] (GB:Q9SE60;GB:Q3EAG9); similar to MTHFR2 (METHYLENETETRAHYDROFOLATE REDUCTASE 2), methylenetetrahydrofolate reductase (NADPH) [Arabidopsis thaliana] (TAIR:AT2G44160.1); similar to Methylenetetrahydrofolate reductase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99538.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82572.1); similar to methylenetetrahydrofolate reductase [Zea mays] (GB:NP_001104947.1); contains InterPro domain Methylen Range:  from: 22162198    to: 22165460    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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