Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->DAG2                         ----------->RAV1(1)                                        ---------->DOF2                <---------ATHB12                                                 --------->YAB1           ----------->GT1         ------->TEIL       ---------->DOF2  --------->WOX13(1)           -   agttcttaagagaaggtaatcaattggccacataatcaacctataccaatggctaacaaagtcttcaaaaaatcaatctcgaatcaaaaagcagtaatag  22128800                                                             <------NtERF2                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                            <-----------HVH21                                                           --------->DEAR3(1)                                                        <---------DEAR3(1)                                                        ------>ZmHOX2a(2)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)                                                <---------ARR11(3)                                                --------->ARR14(2)                                                <---------ARR14(3)                                                --------->GLK1(2)                                                --------->ARR14(3)                                                <---------ARR14(2) --------->MYB52(1)                                                <---------AGP1<---------ANAC46                                               ================HOX2a_HOX2a                                               <------ZmHOX2a(1)  ----------->HVH21                                            =============HOX2a_HOX2a        --------->DAG2       <---------ANAC58 <---------YAB1      ===================HOX2a_HOX2a ---------->DOF2      <----       <---------ANAC58<---------At5g28300  <------ZmHOX2a(1)--------->ATERF1(1)      --------->ATHB12 -------->YAB1        <-----------GT1     --------->ALFIN1 <---------DEAR3(1) --------->At4g35610   aataagaaggcgagtgatcagaaattaccatgggaatagagggagaggaggatctggatcggcgtcgtctaacagagaaaagctgaaacgattgggattg  22128900                                                          ---------->DOF2                                                       ------>ZmHOX2a(2)                              <------NtERF2           <------ZmHOX2a(2)                <------ZmHOX2a(1)                    --------->ARR14(2)      --------->ANAC58       ------>NtERF2           <---------ARR14(2)                           ---      --------->ANAC46      <---------DEAR3(1) <---------GLK1(1)                                -----      --------->ANAC58   ----------->HVH21 <---------TOE2(3)                     <---------MYB46(3) -----------------WRI1<------ZmHOX2a(1)    <---------TOE1(3)               <---------ATHB12   -------   agaagaacacgaagtagaggaagaggaacgacggcgatagaagttagggttatccgatcggaaaggagaaggtagcaatgaagttgttgtaagaggcaac  22129000            ---------->DOF2              --------->TOE1(2)               <---------YAB1             <        <---------TOE2(3)                <---------SPL7                --------->YAB1          ------      ---------->DOF2                   --------->TOE1(1)             <---------YAB1          <------ ------->DOF2                           --------->ANAC58              ----------->GT1       <-------- ---->MYB46(3)           --------->At4g35610                        <---------At4g35610     <-------- ---->RAV1(1)    --------->DEAR3(1)     --------->ANAC58 --------------->AGL15     ----------->GT1 <-   aaaagcttcaaaggtagagccgaactcatctccactacgaccacgtacgagtttcttcacttgaattggaagatgataatacagagagaaaattaagatt  22129100  --------->LBD16                                                                                   - <---------LBD16                                                                                    - ---------LBD16                                                                             --------- --->GLK1(2)                                >>>>>>>>>TBF1                                   --------- ---GLK1(2)                          <---------ICU4          --------->TOE2(3)           --------->At4g35610 -TOE2(3) <---------GLK1(2)          --------->YAB1       --------->MYB52(1)        >>>>>>>>>TBF1   < -YAB1  ----------->ARR10  <-------TEIL<---------YAB1  --------->ANAC46          >>>>>>>>>TBF1      < --------LBD16     ----------->GT1  --------->ICU4 --------->CCA1(2)         <------ZmHOX2a(1)-------   cttcgggggtttgattctctctggtgaaattcgtcggaattatgaagaagaagataaacacaacgttgaaatcggaagaggaagaagaagaagctaaagg  22129200                  *TSS     ------------>CBF     <---------At4g35610 <-----------GT1 -------->At4g35610   <---------YAB1 -------->ZAT2  <---------YAB1                                                                  <---- >MYB52(1)      --------->ICU4                                                            <------MYB46(1) ->DOF2--------->ICU4<---------AHL20(2)       <----------ID1          --------->LBD16     <------MYB83 ---------ZAT2  <---------AHL20(2)          <-----------GT1         <---------LBD16      <---------AtMYB61 ---------At4g35610<---------YAB1           ------------------------>ANAC81   <----------DOF2   ----- -->DAG2  <---------WOX13(1)   <---------ATHB12    ---------->DOF2<-----------GT1        --------->MYB59   tgagctgagatgatggatattattattttaccaataaccagagaattaacaacaaaagaaaatcaaattttccggtttagctttgagaggtttggttcag  22129300                                                                             --------->ARR14(2)            <------------CBF                                                 <---------ARR14(2)         <---------ALFIN1                                                 --------->ANAC58        --------->LBD16                                                   --------->ANAC46       --------->ANAC58                                                   --------->ANAC55(1)       --------->ANAC58                                                   <---------ANAC55(2)      ------->GAMYB                       ----------->GT1          --------->ANAC46      <---------LBD16                  <-----------RAV1(1)       ----------->RAV1(1)  --------->ANAC55(2)    -------->P                      ------->TEIL                --------->ZAT18<-------TEIL   <-----------GT1      --------->At4g35610                ---------->DOF2--------->ANAC55(2) -----At4g35610         <---------At4g35610         --------->AHL20(2)    --------->ANAC58 ---->At4g35610--------->ATHB12  <---------YAB1     <---------AHL20(2)   <---------LBD16    ---------   cttattaacccgcacattgattagtcagcccatttatgaatatgtggcaaatttttaaatcgaaagcccacaaaacacggattcatttaagtatcaatcg  22129400                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                   --------->YAB1                                                          -------->HAHB4             <---------ARR11(3)             <-----------HVH21                           <---------YAB1              --------->ARR11(3)        --------->O2 <---------YAB1                    --------->YAB1            <---------YAB1        --------->TGA1a                               --------->AHL20(2)       --------->YAB1        ==========================================bZIP_DOF--------->YAB1       <---------ICU4      ----------->RAV1(1)   <<<<<<<<<<<<<<<<<LFY    --------->TOE2(3)         --------->ICU4      <---------ALFIN1      --------->ANAC46  <---------ICU4<---------YAB1    <---------ATHB12   --------->PCF2 <---------MYB52(1)         <---------ATHB12----------->GT1  <---------ATHB51  <-----------TCP11(1)    <-----------------AGL1  --------->AHL20(2)--------->AHL20(2)   --------->AtLEC2 >WOX13(1)  <---------DEAR3(2)         <----------DOF2<---------AHL20(2)    --------->WOX13(1)     <-   aactaggcccacatcggtccgttcttattcccacaatggcccttttaatcaattcattaattatagttaatataatatcaattatgaaatcttgcaaact  22129500                                                                                                   xx                                                                                                  <xx                                                                                    --------->AHL20(2)                                          <----------DOF2                   --------->TOE2(3)     <xx                                         <---------ANAC58            --------->AHL20(2)          <---                                         <---------ANAC58            <---------AHL20(1)        xxxxxx                                         <---------ANAC46            <---------AHL20(2)       xxxxxxx                                        <------NtERF2                --------->AHL20(1)   <----------          <---------ICU4               ------>NtERF2           --------->ANAC58     <---------AHL20(2)      <---------AHL20(2)   --------->AHL20(2)               ---------->DOF2 <---------MYB59  <xxxxxxx     --------->AHL20(2)    <---------AHL20(2)--------->AHL20(2)--------->ANAC58    --------->AHL20(2) -----ZmHOX2a(1)    ----------->GT1  <---------MYB52(1)----------->RAV1(1) <---------ANAC55(2)<xxxxxx   aggagtattaaatcactacaagttgttatttatattttcggtggcttttaaatagaacaacacaaaggcaataaaatacctaaaaattaattctactata  22129600                          --------->TOE1(3)                          --------->TOE2(3)                          --------->YAB1                     --------->AHL20(2)                                                       -------                     --------->AHL20(1)                                                     ---------                     <---------AHL20(1)                                                  <----------DOF2                    --------->YAB1                                                       --------->TOE2(3)                --------->AHL20(2)                                                 <---------AHL20(2)          <-------TEIL<---------AHL20(2)                                           --------->AHL20(2)      --------------->AtSPL3                                                   <---------AHL20(2)      --------------->AtSPL8                                                   --------->AHL20(2)      <---------------AtSPL8                                                  --------->AHL20(1) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                           --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             --------->AHL20(1)            <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------AHL20(1)            <---------AHL20(1) ------AHL20(2) <---------AHL20(2)           --------->AHL20(2)              <---------AHL20(2) xxxxxxxxxxxxx>smallRNA(si3)                 --------->YAB1            ----------->GT1--------->ARR11(3) xxxxxxxxxxxxxxx>smallRNA(i2)                <---------AHL20(2)    ---------->DOF2<---------AHL20(2) -GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->ICU4        <---------AHL20(2)  <---------ARR11(3) xxxxxxxxxxxxxxxxsmallRNA(fl3)           <---------AHL20(2)       --------->AHL20(2) <---------CCA1(2) xxxxxxxxxxxxxxxxsmallRNA(si3)           --------->AHL20(2)--------->YAB1    --------->AHL20(2)   ---   ttatttgggaagtacattttaaatataatcttaatttttgtaagtaattatatattagaaataaaaatttaaagagtaaattaatttatatctttaaaga  22129700  Previous    Next  AGI:  At3g59870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G43945.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60471.1) Range:  from: 22127086    to: 22129218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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