Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ---------->DOF2          <---------------AGL15         ----------------->AGL2         <-----------------AGL1         ----------------->AG         <-----------------AG         ----------------->AGL1         --------------->AGL15         <-----------------AGL2                                               <------NtERF2         <---------------AGL15                                                --------->At4g35610         <-----------------AGL3                                               <---------At4g35610         ----------------->AGL3                               --------->TOE1(2)    --------->HSFB2a(1)                                       --------->TOE2(2)                    <-  ------>NtERF2   <------ZmHOX2a(1)                           --------->TOE1(3)                 -----  ----------->RAV1(1) --------->At4g35610                    ----------->RAV1(2)            <-------- -----DOF2--------------->AGL15                        <-----------ARR10  <-----------HVH21--------->WOX13(1)   tcgccaacattcccattagaggaaagctcaaaaatttgatcaccaatttcaatttcaaatctaacctgagacacattgtcagcgatgttgagtccatcag  22086000                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                      <---------GLK1(1)                                      --------->GLK1(1)                                     --------->ARR11(3)                                     --------->ARR14(2)                                     <---------ARR14(2)                                     <---------AGP1                                     ------->TEIL                                --------->MYB52(1)                            --------->MYB52(1)                            ----------->RAV1(1)                         --------->ANAC58                         --------->ANAC46                         --------->ANAC58                ------->GAMYB --------->MYB46(3)                                                  --- ------TEIL  --------->MYB52(1)------->GAMYB                      ------>NtERF2                 ----- ---->At4g35610--------->MYB46(3)    <-----------ARR10  --------->At4g35610                  -------- ---HVH21  <----------DOF2 --------->ANAC46       --------->MYB46(3)    ------>NtERF2        <-------   gtccagtctcgcgcttaacagcctcacacacaacagacggatctcgttccgaaccatcagcaaaactccgactctgcctcttcatcgctagagagaaatc  22086100                                       <---------At4g35610                                       ----------->RAV1(2)                                       --------->At4g35610                                      --------->GLK1(2)                                   --------->ANAC58                                   --------->ANAC58                                 <---------ANAC58                                 <---------ANAC46                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                          --------->GLK1(1)                          <---------GLK1(1)                         <---------ARR11(3)       <------ZmHOX2a(1) --------->ARR11(3)                                     <---------At4g35610       ===========================HOX2a_HOX2a                                  --------->MYB52(1)       ==========================HOX2a_HOX2a                                   <---------DOF5.7(2) --------->At4g35610    --------->GLK1(1)       <---------LBD16               <---------WRKY38(1) ------>At4g35610       <---------GLK1(1)      --------->MYB52(1)      >>>>>>>>>TBF1 ---->YAB1   <------ZmHOX2a(1)   <---------ANAC58             >>>>>>>>>TBF1   <---------WRKY12      - ->GLK1(1)   ====================HOX2a_HOX2a  ----------->HVH21     >>>>>>>>>TBF1              ------ --GLK1(1)   =====================HOX2a_HOX2a--------->DEAR3(2)  >>>>>>>>>TBF1<---------WRKY45-------   agaagcggaggagaaggagagagaagagatctctggcgagcatctgaaacgacggagagtagaagaagaagaagaagaagtcaacggattaagaagtaaa  22086200               ------>NtERF2               <------NtERF2              --------->RAP2.6(2)              ------>NtERF2             <---------ANAC58             --------->ATERF1(2)             <---------ATERF1(2)                            --------->ARR14(2)      --------->LBD16             <---------ANAC46              ----------------->AG                    <---------LBD16             <---------DEAR3(1)            --------------->AGL15               <---------ANAC58             <---------ANAC58   <---------At4g35610         <---------ARR11(3) <---------ANAC58             <---------RAP2.6(2)--------->HSFC1(2)        ----------->ARR10   --------->At4g35610            --------->ATERF1(1) <---------ZAT2 --------->DAG2            <---------At4g35610        <-----------RAV1(1)     --------->At4g35610  <---------ETT(2)    --------->At4g35610        --------->ALFIN1        --------->ZAT2---------->DOF2--------->CCA1(2)<---------At4g35610       --------->ARR11(3)       <---------HSFC1(2) --------->REM1(2)     --------->ZAT2   <------ZmHOX2a(1)     --------->ALFIN1  <---------------AGL15         <---------ZAT2         ----- -------->At4g35610   ------->TEIL        ----------------->AGL1      <---------ANAC58       -------- --->DAG2   --------->RAP2.6(3) <---------HSFB2a(1)--------->ZAT14    <---------ANAC58       -------- --->DOF2 --------->ALFIN1   <---------At4g35610  --------->ALFIN1<---------At4g35610--------->LBD16   gcagaggaagatgtggcggccatggatgtgtagcagcttcggtttcccaaaagtgtagacaagatttgagatgcgagcttagcttcccggttaaaccttg  22086300                                                                           ----------------->AGL3       <---------ICU4                                                      <-------TEIL      <---------YAB1  ------>ZmHOX2a(2)                              --------->ARR14(1)     <---------ARR11(3)               <---------ANAC46               --------->CCA1(2)     --------->ARR11(3) ------>ZmHOX2a(1)         <---------O2      <---------ARR14(2)    --------->YAB1  --------->ARR11(3)<---------ANAC58              --------->ARR11(1)             <-   --------->ICU4   <---------ARR11(3)<---------ANAC58      <---------GLK1(2)                *TSS  <- ----->DOF2   ------>NtERF2<----------DOF2        --------->O2      <---------GLK1(2)       <-------- ->TOE1(3)   --------->DEAR3(1)     <---------AHL20(2)--------->ATHB12<-------TEIL       ------>MYB83 ->TOE2(3)--------->ANAC46 <---------DAG2      --------->ANAC46     --------->ARR14(2)   ------>MYB46(1)   aagccatgatcatcgccaccatgatcctacttttctattttcttggaatacgacgtcgattggattttcagatacggtccatttttagaccaagctttca  22086400                                                              --------->ZAT18                                                         --------->ZAT14                                                         <---------ZAT14                                                   --------->MYB46(3)                                                   <---------ATHB12                                                  ------>MYB83<---------ZAT18                                                  -------->P  --------->ZAT14                                                  ------>MYB46(1)                                                 --------->MYB55(1)                                                --------->AtMYB61                                                <---------MYB46(2)                --------->ALFIN1                                                --------->DEAR3(1)               ------->MYC3                                                <---------MYB111(2)              ------->MYC2                                                <---------MYB55(2)               <-------MYC3                                                <---------MYB111(1)      --------->DAG2             -            <-------TEIL    <-----------GT1     --------->MYB46(3)      ---------->DOF2             < --------DAG2    --------->AHL20(2)      <---------AHL20(2)<---------ANAC46      <-------MYC2       - ---------DOF2   <-----------TBP  <---------AHL20(2)------->GAMYB ----------->HVH21     --------->GLK1(2) --DOF2 <---------TOE2(3)<---------AHL20(2)  <-----------GT1  <---------ZAT14  ------->TEIL     <----   actttatattaagtttcatttttatattttatacattttttttttaatcaccaaccaagtgaagtgcactgaccaaaagcgaacgtggagaatgtgttct  22086500                                                                                                <----                                                                                                -----                                                                                              -------                                                                                            <--------      --------->TOE2(3)            <----------DOF2                                         <-------GAMYB    <---------TOE1(2)           ------->TEIL                                               <---------RAP2.6(3)    ------->TEIL           <---------ANAC46                                           <---------MYB52(1)    --------->SPL7         <---------ANAC58                                          --------->At4g35610 -------------->AtSPL8     <---------ANAC58               <---------AHL20(2)       ------>ZmHOX2a(2) ---------------AtSPL3     <---------AtLEC2              <---------AHL20(2)       <------ZmHOX2a(2) -------------->AtSPL3<-----------RAV1(1)      <---------DAG2                    --------->ARR14(2)<- -----YAB1            --------->ALFIN1         <----------DOF2       <-------TEIL<---------ARR14(2)--   tattcgtaccttcatacctctcaagtgttgcatgaatctttctggttaacttttttttttttaatgtcaaattcatcgtcttggatccgttgccgttaga  22086600                                             --------->ANAC58                                        <---------WRKY45                                        <---------WRKY12                                     <------MYB46(1)                                     <------MYB83 -----ARR11(3)                      <---------AtMYB61 ---->ARR11(3)                      --------->MYB59 ---->ARR10                    <---------AtMYB61        ----------->GT1 -MYB52(1)                <------MYB83  <---------WRKY38(1)                                ------->TEIL --------YAB1             <------MYB46(1)    --------->ANAC58           ---------->DOF2 ----------->GT1 ------->GLK1(2)      --------->ATHB12 --------->WRKY18(1)    ---------->DOF2 --------->At4g35610   -   tattcttgttcttgaatttgacattgtttggttttggtttggtcaacaaggaaatagtcagtaacaaaggaaccaaaagcttctgagaaaatgtaacttg  22086700                                                                                                    <                                                                                                    <                                                         --------->At4g35610                    <----              <---------AHL20(2)                   <------ZmHOX2a(1)                            <----       <<<<<<<<<TBF1                             --------->ANAC58                              ------   --------->GLK1(2)                             <---------TOE2(3)                             ------  <---------GLK1(2)           <------MYB83       --------->ANAC58                              <-----  <---------ARR11(3)          <------MYB46(1)<---------HSFB2a(2)                               ------  --------->ARR11(3)    --------->ICU4  <---------MYB46(3)              --------->LBD16       <------ ---------->ARR10   <-----------GT1<---------AtMYB61     <---------At4g35610                ---------   aaaagattcttcttcttaaatttgacattatttggttttggtttgttcgataaggaatcagctcatcttaagcccgtataactgagtcaaacaatggtag  22086800            <---------------AGL15 -------GAMYB ------NtERF2 --MYB83    --------------->AGL15                                  --------->ANAC58 --MYB46(1)<-----------------AGL2                                  --------->ANAC46 --->MYB111(1)      <-------GAMYB                                  --------->ANAC58 --->MYB46(2)     <---------TOE1(3)                              <---------ALFIN1 ----DEAR3(1)--------->WOX13(1)                                  --------->ZAT6            ---------- --->MYB111(2)    <---------TOE2(3)   <-------TEIL       <---------ANAC58                  --------->At4g35610 --P --------->WOX13(1)            <---------ZAT2        <---------ANAC58         ----------->GT1 >YAB1     ----------------->AG    --------->ZAT2    ---------->DOF2          --------->AHL20(2) ----   gcggtagcaattagccaattagggttgtcttaatccgagctacataaactctaacaaaagcgttccaacactcaaaaaaaaaaaatgtaaaacacctgaa  22086900  Previous    Next  AGI:  At3g59760.1    Description:  OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); cysteine synthase. Identical to Cysteine synthase, mitochondrial precursor (OASC) [Arabidopsis Thaliana] (GB:Q43725;GB:Q8L4A2;GB:Q9M1Z8;GB:Q9M440); similar to OASB (O-ACETYLSERINE (THIOL) LYASE B), cysteine synthase [Arabidopsis thaliana] (TAIR:AT2G43750.1); similar to plastidic cysteine synthase 1 [Solanum tuberosum] (GB:BAB20862.1); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Pyridoxal phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926); contains InterPro domain Cysteine synthase A; (InterPro:IPR005859); contains InterPro domain Cys Range:  from: 22082925    to: 22086393    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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