Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                        -------->HAHB4                                                                       <---------ATHB51                                                                       --------->ICU4                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                    --------->AHL20(1)     <---------HSFB2a(2)                                                                    <---------AHL20(1)     --------->HSFB2a(2)                                                                    --------->AHL20(2)     >>>>>>>ZML2                                                                    <---------AHL20(2)  --------->ARR11(3)                                                                 <--------ATHB1      <xxxxxxxxxxxxxxx                                                                 --------->ATHB51    <xxxxxxxxxxxxxxx                                                                 --------->YAB1      <xxxxxxxxxxxxxxx                                                        <---------ATHB12--------->YAB1  <---------ARR11(3)                                                      --------->WOX13(1)<---------ICU4<xxxxxxxxxxxxxx                                                    <------ZmHOX2a(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                             <---------ICU4      <---------ICU4<xxxxxxxxxxxxxxxxsmallRNA(i)                                             -------->HAHB4      <--------HAHB4xxxxxxxxxxxxxxxxxxxxxx                                             -------->ATHB1     <---------ATHB12 --------->ARR14(2)                                             --------->ATHB51   --------->ICU4<xxxxxxxxxxxxxxxxsmallRNA(i)                                             <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                             --------->ATHB12   --------->AHL20(2)<xxxxxxxxxxxxxxxxsmallRNA(i)                                            <---------YAB1      <---------ATHB51 <---------ARR14(2)                                            --------->ICU4      <xxxxxxxxxxxxxxxxxxxsmallRNA(se3) -----DOF2                                  <---------ATHB51   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---ANAC58                               --------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---ANAC58     ----------->GT1           <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   gtagttgctcttgttgaaagttaaacttgattttgaatcaagtttaattattggatcaattatccaataattaattatggccaaatccaagttctagagt  22070600                                                                                  --------->GLK1(2)                                                                           --------->YAB1                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <---------ALFIN1--------->ARR11(3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                               <---------ALFIN1   <---------ARR11(3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         xxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        --------->YAB1------>ZmHOX2a(1)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       --------->HSFB2a(2)--------->At4g35610  xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       --------->HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxsmallRNA(si3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->YAB1             <---------HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------YAB1           --------->GLK1(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->ARR11(3)       <---------GLK1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          <---------ARR11(3)       <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------HSFB2a(2)            <------ZmHOX2a(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------GLK1(2)   --------->HSFB2a(2)          <---------TOE2(3) <---------HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------HSFC1(1)      --------->TOE2(3)      --------->HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->HSFC1(1)   <---------ALFIN1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxx xxxxxxxsmallRNA(si3)<---------ALFIN1  <---------HSFC1(1)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <x xsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---------HSFB2a(2)--------->TOE2(3)  --------->ARR14(2) xsmallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxsmallRNA(s)<---------YAB1------>ZmHOX2a(1)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ARR11(3) >smallRNA(le3)<---------ICU4 ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---------ARR14(2)   tttctctagaaatatcatcatttccacctccttaaaggattctagaaattttctagaatcatcttccacctccttaaacataaaaatctagatactctaa  22070700                                                                                                    <                                                                                     <xxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                   ------>ZmHOX2a(2)                          <---------RVE1(1)    <x                                  <------ZmHOX2a(2)                           <---------CCA1(1)    <x                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <xxxxxxxxxxxxxxxxxxxxxx                                 <---------ARR11(3)                           <xxxxxxxxxxxxxxxxxxxxxx                                 --------->ARR11(3)                   --------->AHL20(1)           xx                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->AHL20(2)  xxxxxxxxxxx                                 --------->AGP1                     <---------AHL20(1) <xxxxxxxxxxxxx                                 --------->ARR14(2)                 <---------AHL20(2) <xxxxxxxxxxxxx          <---------ARR11(3)     <---------ARR14(2)         <---------TOE1(3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <---------TOE2(3)<---------ARR11(3)  xxxx       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------ARR11(3)     --------->AHL20(1)<xxxxxxxxxxxxxx    --------->GLK1(2)            <---------AGP1xxxxxxxxxxxxxxxx>smallRNA(i)  --------->ARR11(3) xxxxx   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->ARR11(3)  <---------AHL20(2)  <xxxxxxxxxxxxxxx  --------->KAN4(1)             <---------CCA1(2)           <---------YAB1  <<<<<<<<<RAP2.2   <xxxxxx  <---------KAN4(1)           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->AHL20(2)<xxxxxxxxxxxxxxxxx <---------KAN4(2)    <---------TOE2(3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xsmallRNA(s2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   <---------ZAT6 <---------AHL20(1)<xxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tagaataatctagataatttgaataatgtaatctagatcttatgtaagaactctctagacttaagattaaaatattttagatattttgtagtttggaggc  22070800            <---------ALFIN1          ------>ZmHOX2a(1)         <---------ALFIN1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxsmallRNA(se3) xxxsmallRNA(si3) xxxsmallRNA(le3) xxxsmallRNA(i2) x>smallRNA(si3) xxsmallRNA(le3) xxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xsmallRNA(si3) xsmallRNA(le3) xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxx>smallRNA(le3)                                      ----------->GT1 xxxxxxxxxsmallRNA(si3)                                     ---------->DOF2 xxxxxsmallRNA(le3)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxx>smallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xx xxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxx xxxxxxxxxxxxxxxx>smallRNA(i2)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       <xxx xxxxxsmallRNA(le3)               <---------ANAC46     ---------->DOF2             ------>ZmHOX2a(1)< xxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  ---------->DOF2             <xxx xxxsmallRNA(le3)              --------->ICU4<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->TOE2(3)<x xxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tataaatacctcctccccctctcaaatgttgtaatgttgtgaagttgtattcaagtttaaagcaaagtaataaaagttctatttcctaaaaaactctctc  22070900                                                                                    ----------->GT1                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  *TSS                                                                             <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                          ---------->DOF2                                                                         ------>ZmHOX2a(1)                        --------------->AGL15                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                        <---------------AGL15                          ------>ZmHOX2a(2)                        --------->ZAT6                                <------ZmHOX2a(2)                    <---------MYB52(1)                               <---------ARR14(2)            <----------DOF2  ---------->DOF2                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        --------->ARR11(3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          --------->ARR14(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             --------->ARR14(3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 <---------ARR14(3) xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <---------ARR11(3) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxsmallRNA(le3)       --------->ZAT6 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <-----------GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   aaaacacttaaacactttctccattacctctaaaagaattttactctaacaaagtggtatcagagcttgaagatcctaaagatggcgagtaacaatgttc  22071000                                                                            <---------ANAC55(2)                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            --------->O2                                                                            <---------ANAC58                                                                            <---------TGA1a                                                                            <---------O2                                                                            <---------ANAC55(1)                                                                            =========================                                                                            --------->ANAC55(2)                                                                         ----------->TGA1                                                                         ----------->HVH21                                                                  <------ZmHOX2a(1)                                                                <---------TOE1(2)                                                               <---------HSFB2a(2)                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ALFIN1                   ---------->DOF2 --------->ATHB12            ------>ZmHOX2a(1)             --------->At4g35610   <---------ICU4             --------->TOE2(2)             <---------At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <-------MYC3             --------->ABI4(2)    <---------YAB1              --------->TOE1(2) --------->ALFIN1             --------->ZAT14      --------->ICU4          <---------GLK1(1) <---------bZIP60(2)             <---------ZAT18     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ------->MYC3          --------->LBD16       --------->YAB1            --------->GLK1(1) --------->TGA1a       ---        <---------LBD16        <---------YAB1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ------    --------->ANAC46         --------->YAB1   <xxxxxxxxxxxxxxxxsmallRNA(i)<---------TGA2(2) <--------   ccttccaagtcccggtgctcacaaagagcaactatgataattggagtctacgaatgaaggctatcctaggagcacatgacgtgtgggagatagtcgagaa  22071100                                                                               ---------->DOF2                                                                             --------->ANAC58                                                                             --------->ANAC58      <xxxxxxxxxxxxxxxxsmallRNA(i)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ATHB12  <---------TOE2(3)     ---------->DOF2               --------->CCA1(2) =====bZIP_DOF xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              ---------->DOF2 -------->GT1 xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                --------->ANAC58 ---->DOF2<---------LBD16         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <----------ID1 -HSFB2a(2) --------->LBD16  <----------DOF2                    --------->ANAC58                 ----   aggtttcattgaaccggagaatgaaggtagtctttctcaaactcaaaaagatggtttgagagactcaagaaagagagacaagaaagctctctgtctaatc  22071200                                 <-------GAMYB  <------NtERF2                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        --------->HSFB2a(2)     <---------------------WRI1                        --------->HSFC1(1)     ------>NtERF2                        <---------HSFC1(1)     <---------DEAR3(2)                        <---------HSFB2a(2)   <---------DEAR3(1)                  <-------TEIL   ====================MYC_MYB                 --------->CCA1(2)          <-----------HVH21                        xxxxxxxxxxxxxxxx                 --------->ARR14(1)        <---------TGA1a                          ---------->DOF2                <---------ARR14(2)         --------->TGA1a                        xxxxxxxxxxxxxxxxxxx                --------->ARR14(2)         --------->O2                        xxxxxxxxxxxxxxxxxxxxxx              ----------->ARR10 <---------MYB46(3) ---------->DOF2  --------->HSFB2a(1)        <xxxxx         --------->At4g35610<xxxxxxxxxxxxxxxxsmallRNA(i)            <---------HSFB2a(1)        <-----    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------O2             --------->HSFC1(2)     <------NtERF2  <---------TOE2(3) --------->TOE1(2)      ===================bZIP_DOF     ------->TEIL  --------->ALFIN1 ----->WOX13(1) --------->ARR11(1)        <-------TEIL              <---------HSFC1(2) xxxxxxxxxxxxxx   tatcaaggattagatgaagatacgttcgagaaggtcgttgaagctacgtcggcgaaagaagcatgggagaagcttcgaacctcttacaaaggtgccgatc  22071300           --------->ANAC55(2)           <---------ANAC55(2)          <-------TEIL      <---------------AtSPL3      --------------->AtSPL3      --------------->AtSPL8      <---------------AtSPL8                               <------MYB83                           ---     ---------->DOF2                                       <------MYB46(1)                        <--   --------->ANAC58                                        ----------->GT1                       <---   --------->ANAC58                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     ---- xxxxxxx>smallRNA(se3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     ------- xxxx>smallRNA(le3)               --------->GLK1(2)   <---------TOE2(3)                      -------- x>smallRNA(fl3)              <------ZmHOX2a(1)       xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     -------- xxxxxxxxxxxsmallRNA(i)      ----------->GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       --------->ALFIN1 -ZmHOX2a(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------ATHB12                       xxxxxxxxxxx xxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <xxxxxxxxxxxxxxxxxxx   aagtcaagaaagtacgtcttcaaactctaagaggagaatttgaagcactacaaatgaaggaaggtgaactcgtctccgattacttctcaagagtgttgac  22071400                                                                                                    <                                                                                                    <                                                                                                   --                                                           <---------ARR11(3)                      --                                                         --------->HSFC1(2)                        <x                                                         <---------HSFC1(2)                       <xx                                                         --------->HSFB2a(1)                     <---       <-----------GT1                                 ---------->DOF2                          <----    --------->YAB1        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <---------AGP1      <------ ------>At5g28300        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           xxxxxxxxxxxxxxxxxxx>smallRNA(s2) -----GAMYB           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ARR11(3)               xxxxxxxxx ------MYB46(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------HSFB2a(1)------>ZmHOX2a(2)<xxxxxxx ------->GT1       --------->MYB52(1)           --------->YAB1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----->AtMYB77---------->DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ATHB12     xxxxxxxxxxxx ->WRKY12 --------->TOE2(3)  --------->GLK1(2)  --------->ATHB12   <---------YAB1       <xxxxxxxxxxxx --->HVH21--------->TOE1(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <------ZmHOX2a(2)    <xxxxxxxxxxxx xxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ARR11(3)  <xxxxxxxxxxxxxx xxxxsmallRNA(i2) --------->ARR11(1)          --------->GLK1(2)   <---------ARR11(3)  <xxxxxxxxxxxxxx   ggttactaataaccttaaaagaaacggagagaagctagatgatgtgagaatcatggagaaagttcttagatcattggatctaaaatttgagcatattgtc  22071500  Previous    Next  AGI:  At3g59720.1    Description:  transposable element gene. copia-like retrotransposon family, has a 1.1e-214 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family) Range:  from: 22070982    to: 22074879    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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