Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ----------->GT1                 --------->ZAT14                      <---------CCA1(2)             --------->DAG2               <---------------AtSPL8            <---------GLK1(1)            ---------->DOF2        --------->ARR14(2)                   ----------->GT1 <---------------AGL15             <---------ARR14(2)                 <---------ANAC58 --------->YAB1     <----------ID1<------ZmHOX2a(1)                   <---------ANAC58 -----REM1(1)------------------------>ANAC81  <---------ZAT14         <---------ANAC46     <--------- -GT1  --------->YAB1----------->RAV1(1) <------------CBF        <-----------GT1  <---------MYB52(1)   gtaacataataagaaaaagtaaacaacaaaaacagaggatttggattgtacagtatgatgttctgtttttctgcttgtaaatcccttatctgtcttttgg  22062700              <-----------GT1            --------->DOF5.7(2)           --------->TOE2(3)           <----------DOF2                                                          <-------TEIL           --------->TOE1(3)                                                      --------->ARR14(2)      <---------MYB52(2)                                                          <---------ARR14(2)      --------->MYB46(3)                                                          <---------GLK1(2)  <---------MYB52(2)                             --------->ANAC55(2)              --------->ARR11(1) --------->ANAC58      <----------DOF2           <---------ANAC55(2)        <-----------GT1      <--- --------->ANAC46 <----------DOF2            --------->YAB1             <----------DOF2          <--- --------->ANAC58<---------DAG2             <---------YAB1         <---------AHL20(2)            <--- -DOF2<------------MYB.PH3(2)             --------->YAB1         <---------AHL20(2)--------->ARR14(1)   cccaagtaacaaactttaaccttttcttttgggccagacttcaactataatacgttttgtaggctatattttttcttttaactagattcgaattggatgg  22062800                                                                         <-----------HVH21                                                                    ----------->RAV1(1)      <---------LBD16                                            ------>ZmHOX2a(1)   <---------GLK1(1)                                             ============================HOX2a_HOX2a <---------ANAC58                           --------->ANAC58   <---------ANAC58       <------ZmHOX2a(2) <---------ANAC58                           --------->ANAC58   <---------ANAC58      --------->AGP1 <---------ANAC46                      --------->YAB1       --------->GLK1(1)       <---------At4g35610 ------ANAC58                         <---------ATHB12      <---------GLK1(1)       --------->At4g35610 ------ANAC46             <---------At4g35610             --------->ATHB12      <-----------HVH21 ------ANAC58             --------->At4g35610          --------->ANAC55(2)   ---------->DOF2   cttgggtatgcggtatcagtgattacttagctaaattcaaatcatcaagaaatgttcacatgatttcctgcaacatgtcaaaagtcagatcaacttagtt  22062900                                                           <----------DOF2                                                          <---------ANAC58                                                          <---------ANAC58                                                       ---------->ID1                                                      <---------ANAC58                                                      <---------ANAC58                                                      <------MYB46(1)                      <---------ANAC55(2)             <------MYB83   <---------MYB52(1)                      <---------ANAC46               <---------AtMYB61                      ----------->GT1                --------->MYB111(2)                          <--                   --------->ICU4                    <---------MYB46(3)                        <-----              --------->ANAC58                       --------->MYB59--------->At5g28300     <--------              --------->ANAC46                       --------->MYB46(2)       ---------->DOF2--------              --------->ANAC58                <----------DOF2      ----------->GT1      ----------->GT1             --------->LBD16    --------->ATHB12     --------->MYB111(1)     --------->ANAC46<-------   tgataagttatgttccacgaaattatgtgaaaattgatttgttttcttctttagtttggtgctttcacactgttaatccacaaagccttgttgtaaatct  22063000                                                                                               ------       <---------ANAC46                                  --------->CCA1(2)                 <--------- -------WRKY18(1)                                 --------->ANAC46           <---------At4g35610 ----ICU4                                         --------->ANAC58    <---------ICU4   <---------ARR11(3) -CCA1(2)               --------->WRKY12          --------->ANAC58 --------->YAB1      --------->ARR11(3) ->ARR11(3)          --------->TOE2(3)          --------->ZAT6    <---------YAB1       --------->GLK1(2) --ARR11(3)---------->DOF2  <----------DOF2    --------->ZAT14  --------->YAB1     --------->YAB1   tgaccaatggcctaaaagtcaaacctttgacttttcagtgtttcttctcaacactcaagagatggatgataatattcacagatgatcaaaatctttcaca  22063100                         --------->O2                 --------->AtMYB61                --------->MYB46(3)               ------>MYB46(1)               >>>>>>>>>>>>>>>>>LFY               ------>MYB83             --------->DEAR3(1)             --------->MYB46(3)             <---------MYB111(2)                 --------->MYB46(3)             <---------MYB55(2)                 -------->P            --------->ANAC58                    ------>MYB83            --------->ANAC58       <---------YAB1<---------ATHB12  --------->TOE2(3)      <---------O2           ------>MYB46(1)                <-----------GT1  --------->TOE1(3)      <---------ANAC46       --------->ANAC58    ------>ZmHOX2a(1) --->ANAC46 --------->ANAC46<---------ZAT18 ------>NtERF2          <---------ANAC58 --HVH21  *TSS--------->ANAC46  --------->ICU4  --------->ANAC58   <---------ANAC58    <---------YAB1   caaacctaaaaaacacccaccaatgtctcgtgaacttattattctctgccaaccaattcttgttctgttccttactctgttttacaattctcatggctac  22063200                   <------ZmHOX2a(1)             ------>ZmHOX2a(2)             =============HOX2a_HOX2a            <------ZmHOX2a(2)                       ------>MYB83            ==============HOX2a_HOX2a               -------->P           --------->ARR11(3)                       ------>MYB46(1)           --------->GLK1(2)                      ------->GAMYB           <---------ARR11(3)               <----------DOF2           <---------AGP1          <---------MYB52(1)<---------ALFIN1           --------->ARR14(2)     --------->At5g28300--------->ANAC46           <---------ARR14(2)    ----------->GT1 --------->MYB46(3)             <----------DOF2 -----        --------->ANAC58      ------------>AtMYB77--------->AtMYB61      <-----------HVH21      <----        --------->ANAC58   <----------DOF2  <---------DAG2               <--------ZAP1          <----   ----------->HVH21 --------->ARR14(2) <---------ZAT14   --------->ANAC46--------->WRKY18(1)   -----   ttcgtctcacaaggatctgtaggaatcggcttcaacggttacttcactttaaccaacaccacaaaacacacattcggtcaagctttcgaaaacgagcacg  22063300                                                                                           --------->ANAC55(1)                                                                                           --------->ANAC58                           --------->At4g35610                                             --------->ANAC58                       <-----------HVH21                                                   --------->ANAC46                    <---------O2                                                         <---------ALFIN1                    --------->At4g35610                                           --------->ANAC58                    --------->O2                                               --------->ZAT2   <---------ATHB12 <---------At4g35610                                       --------->ANAC58 -->MYC3          <-----------RAV1(2)      <---------WRKY12  ------>ZmHOX2a(2)--------->ANAC46 ---MYC3       ----------->HVH21           <---------WRKY38(1)     --------->LBD16--------->ANAC58 ---MYC2       --------->ETT(2)   <----------DOF2           <------ZmHOX2a(2) --------->ANAC58 -->MYC2<---------ARR11(3) <---------At4g35610       <----------DOF2        --------->MYB46(3)      <   ttgaaatcaagaactcatcgacaggtgtcatctcatctttctcagtcaacttcttctttgcgatcgtccctgaacataaccagcaaggctcacacggtat  22063400                                        ------>ZmHOX2a(1)                                  --------->At4g35610                                  --------->HSFC1(2)                                  --------->ZAT2                                  --------->HSFB2a(1)                                  <---------HSFC1(2)                                  <---------ZAT2                                  <---------At4g35610                                 <-----------ARR10                                 <---------ARR14(2)                                 --------->ARR14(2)                               --------->LBD16            --------->GLK1(2)        --------->At4g35610   --------->ANAC46           <---------GLK1(2)                       ----        <---------At4g35610   --------->LBD16<---------ATHB12<----------DOF2      ---------->DOF2----        <---------CCA1(2)    <---------HSFB2a(2)      --------->TOE1(1)         --------->At5g28300    <-----------TGA1         <---------LBD16 <------ZmHOX2a(2)                 ------->GAMYB   <-----    <-----------HVH21        --------->HSFB2a(2)    --------->TOE1(2)       --------->MYB52(1)------- ----------DOF2----------->RAV1(1)<---------HSFB2a(1)<---------LBD16     --------->ANAC46     <------   gactttcgtcatctctcccacaagaggccttcccggagcttcctccgatcaatacctcggaatctttaacaaaacaaacaacggtaaagcctcgaataac  22063500                                                                                                   <-                                                                                              <------                                                                                         <-----------RAV1(1)                                                         <---------ICU4                 ------>ZmHOX2a(2)                                                         --------->YAB1               --------->ARR11(3)                          <----------ID1              --------->YAB1                  --------->AGP1                        <---------ICU4               <---------YAB1                   <---------ARR11(3)                        ---------->DOF2            --------->YAB1                     <---------ARR14(2)                     --------->YAB1               <---------YAB1            <---------At5g28300 <---- ----->TOE2(3)      <-------TEIL                 <---------TOE2(3)         --------->MYB52(1) <------ ----->TOE1(3)  --------->ARR11(3)              --------->YAB1             <-----------GT1--------->At4g35610 ----TOE2(3)    <---------ARR11(3)         <---------ARR14(2)           --------->YAB1--------->ARR14(2) -->MYB52(1)  --------->MYB59              <---------ARR11(3)         <---------TOE2(3)<------ZmHOX2a(2) -----GT1     ----------->ARR10            --------->ARR11(3)         <---------YAB1 <---------GLK1(1)   gttatagctatcgagttagatattcataaagacgaagagtttggagatattgatgataatcatgttgggattaatattaacggtttgagatctgttgcct  22063600  Previous    Next  AGI:  At3g59690.1    Description:  IQD13 (IQ-domain 13); calmodulin binding. similar to IQD14, calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G43680.1); similar to IQD14, calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G43680.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46285.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 22059731    to: 22062650    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g59700.1    Description:  ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE); kinase. similar to receptor lectin kinase, putative [Arabidopsis thaliana] (TAIR:AT3G59750.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G43700.1); similar to receptor lectin kinase 3 (lecRK3) [Arabidopsis thaliana] (TAIR:AT3G59740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15684.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro d Range:  from: 22063110    to: 22065252    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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