Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <--------ATHB1                                                        -------->HAHB4                                                        --------->ATHB51                   ----------->GT1                      <---------ICU4                 ---------->DOF2                        --------->ATHB12          --------->AHL20(2)                           --------->AHL20(2)          <---------AHL20(1)                           <---------AHL20(2)          --------->AHL20(1)                        --------->AHL20(2)          <---------AHL20(2)                       --------->AHL20(2)         --------->AHL20(2)                        <---------AHL20(2)         --------->YAB1                     ----------->RAV1(1)                     <---------YAB1        <---------YAB1                   --------->ANAC58                  --------->ARR11(3)     <---------AHL20(1)                  --------->ANAC58         --------------->AGL15     --------->AHL20(2)                  --------->ANAC46   --------->ATHB12      --------->YAB1     --------->AHL20(1)            <---------AHL20(2)  <---------ATHB51    <---------ARR11(3)      <-     <---------AHL20(2)    ----------->GT1 <----------ID1 <---------WOX13(1)     <---------YAB1  <---   ataagaatttattatattacaaagaaaaaatgtttatattatcaagcgacaaaataaataattgatttctatgttaagaacttatggtaattgtttttat  22054600                                                                                         <--------ATHB1                                                                                         -------->HAHB4                                                                                         <---------ICU4                                                                                         --------->ATHB51                                                                                         --------->ATHB12                                                                                        <---------ATHB51                                                                                        --------->ICU4                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                   --------->ANAC46                                  --------->YAB1                            <---------ICU4   --------                                  --------->TOE2(3)                      --------->TOE2(3)  <--------                                 <---------YAB1        <---------AHL20(2)--------->TOE1(3) <---------WOX13(1)                               --------->YAB1     <---------YAB1         --------->YAB1 <---------YAB1 ----------GT1       <---------AHL20(2)           <---------TOE2(3)   --------->YAB1   --------->AHL20(2) --------HVH21   ------>ZmHOX2a(1)--------->TOE1(3)   --------->AHL20(2)<---------YAB1 <---------AHL20(1)   gtcacaacttgaattactcctatataaaaacaattaccataactaaacaactaagattaaatgactaaacaattaccataactacacaaaataattgatt  22054700                                                                --------->MYB46(3)                                                              ------->GAMYB <---------TOE2(3)                                                             <---------MYB55(2)        ------->TEIL                    <---------DAG2                           <---------MYB111(2) <---------AHL20(2)        <---------ANAC55(2)                       --------->AHL20(2)        <---------TOE1(3)        --------->ANAC55(2)                    --------->YAB1--------->MYB46(3) --------->AHL20(2)     --------->ICU4 <----------DOF2          <---------ARR11(3)-------->P   <---------YAB1 ->ATHB12        <-----------GT1  <-----------GT1 <---------AHL20(1)   <---------At4g35610      <---- -AHL20(2)     <-----------GT1    <---------ICU4  --------->AHL20(1)   --------->At4g35610 <---------   actggtcattatgtgattttcacttttgtaatctaataactatacaaaatcatatattagacaacaaccattcagcttaagattaaatgaatataacatg  22054800                                                                           --------->YAB1                                                                          ==============HOX2a_HOX2a                                                                          <------ZmHOX2a(2)                                                                         --------->ARR11(3)                                                                      --------->ALFIN1                                                                  ---------->DOF2          <---------                                                               --------->ANAC46          <---------YAB1     ----------->GT1                                          --------->LBD16          --------->YAB1 -------HVH21             ------->TEIL                       ----------->RAV1(1)      <---------TOE2(3) --GT1            <-------TEIL<---------YAB1        ---------->DOF2--------->DAG2<------ZmHOX2a(1)  -   tcaaatattgtgaatcaaggctcatatgaattttgatgagagaagactactccataaaggcttccacagaaagtggatcatgaggactatggtaattgca  22054900                                  <---------AHL20(2)                                              <--                             ------------>CBF                                                    <---                            <-----------GT1                                                  --------      ------------>CBF    <----------DOF2      <---------CCA1(2)                    --------->ANAC46 ---CBF             <---------DAG2--------->AHL20(2)                      --------->ANAC46   <------- --------->DOF2     <----------DOF2      ------->TEIL       ------>ZmHOX2a(1)    *TSS      ------>ZmHOX2a(1)   ttaaaagcaccaattctcttcactttttctttacaattttttgaatctcttatctcactctcctctctctctctctccacaactacaagactcctatgac  22055000   --------->ANAC58   --------->ANAC58 ---------->DOF2 -----GAMYB                                    ---------->DOF2 --------->DAG2 ------ZAT6                               --------->AHL20(2)  ---------->DOF2 --->HVH21                              ------------------------>ANAC81 --YAB1                            ---------->DOF2   <------ZmHOX2a(1)                <---------ALFIN1   tgttaaagcaagagagagaagagaaaacagcaactcttaaagaatgaaataaagaggaaaacaaaaaagctagtcaattgtttaactcacactctctcgc  22055100                                                         --------->GLK1(2)                                                         --------->ARR14(2)                                               --------->At4g35610                                               <---------At4g35610                                            <---------At4g35610                            <-----------------AGL3  ---------->DOF2                       <---------GLK1(2)    --------->At4g35610     xxxxxxxxxxxxxxxx>smallRNA(i)      <----------DOF2  <---------GLK1(2)   cctctctctctctctccctctctcaaattctctaaaattggctttgagcagatgaaaagaatctccatcttcttctctatctcttggctatctctctctc  22055200                                                                       --------->CCA1(2)                                                              ----------->RAV1(2)                                                              --------->ZAT2                                                              --------->At4g35610                                                    ---------->DOF2 --------->ANAC58         <-------                                                  <-------TEIL<---------At4g35610           <--------                                                 --------->CCA1(2)  --------->ANAC58  <-----------GT1                                          --------->ANAC58  <---------ALFIN1     <---------AHL20(2)                                          --------->AtLEC2 <------NtERF2         --------->AHL20(2)                           ---------->ID1 --------->ANAC58 ----------->HVH21    --------->AHL20(2)   taaactattcactcacacagtcattcttcgtcttcttctgtttcatgcaagattcaaaggcctcacctgcaaggtatgcatattaaattcactcctttag  22055300                                                                                <-----------HVH21                                                                               ------->GAMYB                                                                              <------------AtMYB77                                                                            ------->TEIL                                                                            <-----------GT1                                                                         --------->ANAC55(2)                                                                         <---------ANAC55(2)                                                                      --------->ICU4                                          --------->ANAC55(2)       <---------ICU4        ============================================================================================= --MYB52(1)                               <---------ANAC55(2)      --------->ICU4            <------- --DOF2 --------------->AGL15     ----------->GT1                --------->ANAC55(2)         --------   tcactgcttactcaattttggatttttgtttttgatgtgttaatacatattgcaaaacaaaaaactcacataattatgtaactgtctggggttttctctt  22055400                                       --------->ATHB51                                       -------->ATHB1                                       <---------ICU4                                       --------->YAB1                                       <--------HAHB4                                      <---------ATHB51                                      --------->ICU4       <---------AHL20(2)     <---------GLK1(2)       --------->AHL20(2)  <-----------GT1      <------ZmHOX2a(1)                          <---------TOE2(2) ========MADS_MADS      <---------CCA1(2)<---------YAB1       <---------YAB1               <---------TOE1(2) --------AGL15     <-----------GT1    <---------ATHB12    <---------GLK1(2)    <---------AHL20(2)  -- ------->AGL15 --------->AHL20(2)--------->TOE2(3)  ----------->GT1            <---------YAB1      <-   aatagcaaattaaaaaaaaaaataccatatcacattctcaattattactaggaggggtcaaattcttataggtctatctatattattcaatcccatgttt  22055500  Previous    Next  AGI:  At3g59680.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN69676.1) Range:  from: 22054981    to: 22057017    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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