Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------------->AGL15                                               <---------------AGL15                               --                                              ----------------->AGL2                             <---                                              ----------------->AGL3                           <-----                       --------->ANAC58       <---------MYB59                               ---------                --------->ARR14(2)           <-----------------AG                          <---------ARR11(3)               <---------ARR14(2)            ----------------->AG                      --------->ANAC46               --------->ARR14(2)            ----------------->AGL1                    --------->ANAC58           --------->ZAT18          ----------->GT1                      <-------TEIL  --------->ANAC58           <---------ZAT14    --------->AHL20(2)                 ----------->GT1       --------->O2--           --------->ZAT14    <---------AHL20(2)                --------->ANAC58    --------->TOE1(2)           <---------ZAT18    <---------AHL20(1)                --------->ANAC58   --------->DEAR3(2)    --------->YAB1     --------->ANAC58    <-----------GT1    ---------->DOF2 --------->YAB1<--------   ctacaaaaataagtgcagaaactgcaagtcaaaaaatttggaaaattacccaattagagaaggggaaagctaaaattcattaagaacccacgagatttct  22049200                                                                                           --------->GLK1(2)                                                                                   --------->ARR14(2)                                                                                 --------->LBD16                                                                               <---------LBD16                                                                            <------NtERF2  --------->ARR14(2)                                                                            --------->ATERF1(1)                                                                            ----------->HVH21       --------->ZAT14                                                     <-----------HVH21       <---------ZAT14                                                     <---------ATERF1(1)  <---- ------->LBD16                                                             <-----------TGA1<---------ARR14(2) ------LBD16                                                              <---------ANAC58<---------ARR14(2) ------GT1                                                                <---------ANAC58<---------GLK1(2) >GLK1(1)             <------ZmHOX2a(2)                              ---------->DOF2      --------->ARR14(2) ---->NtERF2          <---------ATHB12                            <-----------HVH21<---------ARR14(2) -GLK1(1)       <---------ARR14(2)                             <----------DOF2 --------->At4g35610   ccggctaagtaaactgagaaaccgatcaatttagagaaatgaagaagatgatataaaaaccttgtctttgtcaaaggcgtcaccggaatcgagattctgc  22049300                                                  ------>ZmHOX2a(1)                                       <---------At4g35610                                   <-----------TGA1                                   <-----------HVH21                            ----------->HVH21  ------>NtERF2                            --------->ANAC58  <---------ALFIN1                            --------->ANAC46  --------->DEAR3(1)                            <---------ETT(2)------>NtERF2                            --------->ANAC58<---------ATERF1(1)                                   <--     ----------->HVH21   --------->DEAR3(1)--------->ANAC46                                      <---   <---------O2         --------->DEAR3(2) --------->DEAR3(1)                   --------->AHL20(2)---   --------->O2       <---------ALFIN1 --------->At4g35610                   ----------->GT1     ---- -----AtLEC2<------ZmHOX2a(2)------>NtERF2<---------LBD16               <------ZmHOX2a(1) ---------->DOF2   atgagacgagaccgatcaaatccaacaccgacgacatcgtcatctccgcctcctctgtaagcgaatagccaataggaagcgattaaaaacacagaagcga  22049400                                                   <---------ZAT14                           --------->At5g28300   --------------->AtSPL3                       ------>NtERF2             --------------->AtSPL8       --------->TOE2(3)<------NtERF2          ------>NtERF2     ------>NtERF2    ----------->HVH21       --------->WRKY38(1)    ------>NtERF2     --------->DEAR3(1)      ----------->HVH21                ----------->GT1    <---------ALFIN1 --------->RAP2.3(1)      --------->WRKY12                ----------->GT1  --------->LBD16    --------->DEAR3(2)     <---------At4g35610       ----------->GT1 --------->DEAR3(1) ------>NtERF2           --------->At4g35610     ------->GAMYB                  -- -------ALFIN1     --------->ANAC58        --------->DEAR3(1)    --------->MYB52(1)             ----- ------ABI4(2)     --------->ANAC46       --------->MYB46(3)    <---------WRKY38(1)             ----- ------>AtMYB61    --------->ANAC58     <---------ALFIN1        <---------WRKY12         <-----------GT1 ----->MYB46(3)  <---------ALFIN1 --------->ARR11(3)           <------ZmHOX2a(2)  --------->AHL20(2)-   ccaccgcgacctcaatctcccacgccgacggtaatagaacttccaccgctgactgtaccatctcgatcaacggagttaaaaagtttaaatttttcgaaac  22049500                                                 <---------ZAT14       --------->HSFB2a(2)                                                 --------->ZAT14       <---------HSFB2a(2)        <------ZmHOX2a(2)                      --------->ANAC46       <---------LBD16        ==============HOX2a_HOX2a           <------ZmHOX2a(2)       <---------YAB1        ==================================HOX2a_HOX2a            <---------YAB1               <------ -------->DOF2  <---------ARR14(2)        <------ZmHOX2a(1) --------->YAB1         <---------HSFC1(2) ---->ANAC58    --------->ARR14(2) ================HOX2a_HOX2a  --------->TOE2(3)  --------->HSFB2a(1) ---->ANAC58   <------ZmHOX2a(1)   ------>ZmHOX2a(1)      --------->GLK1(2)        <---------HSFB2a(1) -------->DAG2 ====================================HOX2a_HOX2a <---------ICU4      --------->HSFC1(2)   gaaaagcgcgatcaagaggattgtctagggatttatcctatggaggatcacaacacagagaatcaacattattctggagagaagaaacttcgccttcttt  22049600                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                            ----------->GT1                      <---                                                           --------->DAG2                        ----                                              --------->ARR11(3)                                <----                        <------ZmHOX2a(1)    <------ZmHOX2a(1)                                 ------  >>>>>>>>>TBF1        <----------ID1---------->DOF2 ---------->DOF2                          <------ ----DOF2           ---------->DOF2*TSS  ---------->DOF2  ---------->DOF2              <------ZmHOX2a(1)   agaagaagaacaagtgagtcaaaaaaggacaatcgctgagaaagaaaggattttggaaagaaaagtagaaactgagaaattagttgtaaggacggagtta  22049700 --------->GLK1(1) <----------TaMYB80                                                        <---------MYB52(1) ------>LBD16                                                             ----------->GT1 ------HSFB2a(2)                                                         <---------HSFB2a(2)   ------ ----->ANAC58                                                         <---------ARR14(2)      ------- ------ANAC46                                                         <---------AGP1  --------->HSFB2a(1) ----->ANAC55(2)                                                    ----------->ARR10 <---------HSFC1(2) ------ANAC55(2)                     <---------PCF2       --------->ARR14(2)          --------->HSFC1(2) ----->ANAC58                     --------->ALFIN1        <---------ARR14(2)      <---------TOE2(3) -----LBD16                     <-----------RAV1(1)   <------ZmHOX2a(1)  --------->HSFB2a(2)  ------- --->MYB52(1)      ------------>MYB.PH3(1)   <------ZmHOX2a(1)     <--------P  --------->ICU4 ------- ---ARR14(2)   ----------->GT1  <---------MYB46(3)   ----------->GT1<---------MYB46(3)<---------HSFB2a(1)   cggaaatacccttggaactgtaaacagttactggctgtgggactcgaggactgtgaggagaattcgagggtagttctggtaattaagaaacttcgaacgt  22049800                     <---------TOE1(2)                              ------->TEIL       --------->TOE2(3)                                         <---------ANAC46       ------->GAMYB --------->SPL7                         <---------ANAC58     <---------At5g28300                                    <---------ANAC46    <-----------GT1<---------SPL7                           <---------ANAC58  ------>MYB83 --------->YAB1    --------->TOE1(2)                 <---------ARR11(3)       ------>MYB46(1) --->TOE2(3)     --------------->AtSPL3              --------->GLK1(2)      <---------MYB59 -->ANAC58       <---------------AtSPL8              --------->ARR11(3)  <-----------GT1 ---->GT1     --------->DAG2            ----------->GT1    ---------->ID1<<<<<<<<<GT-1              - -->ANAC58   ---------->DOF2 <----------DOF2   ----------->GT1   ----------->GT1          <---------MYB46(3)   aaatagtaaccgtagaaaagtcgtacgaagactttttataaactgaaaaatgaaaaatcttgtcgtgatgtatattaaccaaattttcttactggttgaa  22049900                                                                    <------MYB46(1)                                                               <---------TOE2(3)                                                          <---------ANAC46                                                     <---------ICU4 <------MYB83                                               --------->AtMYB61    ----------->GT1                                              --------->MYB46(3)   --------->MYB59                                            ------>MYB83<-----------GT1                                            --------->ANAC46<---------MYB52(1)                                            ------>MYB46(1)--------->TOE1(3) --------->DAG2                           <---------MYB59 <---------ANAC55(2)       --------->YAB1 --------->DOF2                           --------->AtMYB61--------->TOE2(3)        --------->AHL20(2)   taaaaagggaggccaaaaacaaaaatcgaactagtcaaattgaaccaaaccacactaattacgttaagtttggtttaaaatttcaataaaaactggtata  22050000          <---------MYB52(1)         --------->LBD16        <---------ANAC46        <---------ANAC58         <----------DOF2        <---------ANAC58         <---------DAG2        <---------ANAC55(2)   <-----------GT1                                                 <------     <---------ARR14(2)     <---------ANAC58                                                  -------     --------->ARR14(2)     <---------ANAC58            <---------AHL20(2)      ----------->GT1   tgactcaaatccgtgaatcaaattagagtttcttacttttctattgactcaatggtttttatttgttttacttagaacaaatttgtaaaactatattaaa  22050100  Previous    Next  AGI:  At3g59660.1    Description:  C2 domain-containing protein / GRAM domain-containing protein. similar to VAD1 (VASCULAR ASSOCIATED DEATH1) [Arabidopsis thaliana] (TAIR:AT1G02120.1); similar to Os09g0516900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063676.1); similar to hypothetical protein OsJ_028856 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45373.1); similar to hypothetical protein OsI_030993 [Oryza sativa (indica cultivar-group)] (GB:EAZ09761.1); contains InterPro domain GRAM (InterPro:IPR004182); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:I Range:  from: 22045148    to: 22049635    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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