Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                              <---------AHL20(2)                                                                          --------->YAB1                                                                          -------->ATHB1                                                                          <---------ICU4                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                     <---------AHL20(2)                                                                 --------------->AGL15                                                                 ====================================                               <----------DOF2            <-----------GT1--------->ICU4                               <---------DAG2         --------->AHL20(2) <---------ATHB51                        <---------TOE2(3)        --------->AHL20(2)  --------->AHL20(2)                       ---------->DOF2        <---------ICU4 <----------DOF2 --------->AHL20(2)    -- -HVH21    <---------ICU4   <-----------GT1--------->YAB1<---------AHL20(1) <---------YAB1       ----   ctagatttcatacttattccatgactaaagttactttacttcatttcataatcaaataatatactttctatttaaattattatataatttgttgacaaaa  22030100                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                 --------->AHL20(1)                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                                --------->AHL20(2)            <---------AHL20(1)                                                <---------AHL20(2)            --------->AHL20(1)                                            <---------AHL20(1)         ----------->GT1                                            --------->AHL20(1)      --------->DAG2                  <                                            --------->AHL20(2)     ---------->DOF2      <---------AHL20(2)                       ----------->GT1      <---------AHL20(2)  <---------------AGL15   --------->AHL20(2)                      --------->DAG2       --------->AHL20(2)   <---------HSFB2a(2) <---------AHL20(2) ===============================================================================MADS_MADS      <----- ------->AHL20(2)    ---------->DOF2   --------->AHL20(1)       --------------->AGL15  <---------AHL20(2) ----->AHL20(2) ----------->GT1        <---------AHL20(1)       --------->HSFB2a(2)<---------AHL20(2)   aaaatataggtatctaagaagtaaaaagtatatttttcatatatattaaattaaattaaacatgttctaaaaagggataatattttttatttatttatct  22030200                --------->AHL20(2)                <---------AHL20(2)            --------->AHL20(2)            <---------ICU4            <---------AHL20(2)                                                      <---------ARR14(2)            --------->ATHB51                                                        --------->ARR14(2)           <---------YAB1                                                           <---------ARR11(1)         --------->YAB1                                                    <---------WOX13(1)        --------->ICU4         <-----------ARR10               <-----------GT1      --------->ARR11(3)        <---------YAB1 <---------YAB1                       ------->TEIL  <------------CBF    ------- ----------DOF2<---------AHL20(2)                    --------->AHL20(2) <---------YAB1  --------->ZAT14 ----MYB59 --------->ICU4      --------->ARR14(2)  <---------GLK1(2)<----------DOF2<---------CCA1(2)   aacttttggtataattatttattttctgatacaaatctactcactcacatccagattatatgtattttctctttctaattgcctcatatctacagtcatt  22030300                                                                     <-----------GT1                               --------->ATHB12                 <---------AHL20(2)                               <--------HAHB4                  <---------AHL20(2)                               --------->YAB1                  --------->AHL20(1)                              <---------ATHB12                 <---------AHL20(1)                          ------------>CBF               --------->YAB1                             -                         <-----------GT1                --------->AHL20(2)                          <    <---------YAB1       --------->YAB1             <---------AHL20(2)                             <-   <-----------TBP    <---------ICU4                --------->AHL20(2)  <----------DOF2            == <---------AHL20(2)  ------>ZmHOX2a(1)        ----------->GT1  --------->AHL20(2)                <--- --------->AHL20(2) <---------MYB59        ---------->DOF2--------->AHL20(2)                     ---- -->WOX13(1)    <----------DOF2<---------ICU4----------->GT1--------->YAB1            <-----------GT1   catttttttataggttttctttcctaattacaatcatttatggacaaaagttaaaaaaataaaaataaaattttcttttctcttcattttcccatctatt  22030400             <---------AHL20(1)             <---------AHL20(2)             --------->AHL20(1)            --------->AHL20(2)            --------->YAB1           <---------YAB1        --------->ICU4      ----------->GT1 ----------->TBP                                   <------------CBF                            <----- --------->AHL20(2)                              --------->ICU4                       <---------ARR11(3) -------->AHL20(1)                              --------->ANAC58                 <---------ARR11(3) ---------AHL20(1)                       <---------ARR11(3)                      --------->AHL20(2)-- --------------AGL15                     <---------ARR14(2)                      <---------AHL20(1)-- ==================================MADS_MADS    --------->ANAC58                 --------->AHL20(1)<- ------AHL20(2)    --------------->AGL15 --------->ARR14(2)              <-------TEIL --------->ARR11(3) ----->AHL20(2)    <---------------AGL15 --------->GLK1(2)          --------->ANAC46<---------AHL20(2)   aatatatatagttattatattcttcatgtagtaatagtagcagtatctgtaagcattgaatttctgttatacacatccatctatatattatcttgttctg  22030500                                                    <---------SPL7                                                   <---------ANAC58                                                   <---------ANAC46                                                   <---------ANAC58                                                 ------>MYB83                                                 ------>MYB46(1)                                              <---------bZIP60(2)          --------->DAG2                      ----------->RAV1(2)      --------->YAB1                          <---------ANAC58                       ------>MYB83     <---------YAB1                           <---------ANAC58         <---------GLK1(2)   --------->YAB1                        --------->YAB1 --------->ATHB12             ------>MYB46(1)  <---------AHL20(2)                     <---------ICU4<---------YAB1  --------->ARR11(3) ----YAB1---------->DOF2                <------ZmHOX2a(2)              <---------ARR11(3) ------->AHL20(2)                 -------->P  --------->At4g35610      <---------ARR14(2) ------->AHL20(1)     --------->DAG2   <---------ARR11(3)              --------->ARR14(2) --------AHL20(1)   ---------->DOF2    --------->ARR11(3)            ----------->ARR10         <-----   atatattatcataaagctaaaaaaaaggtatgatgcaaccagatcatgacctgccgtatgatttggagggagagatactctctcaccttccaatacaaat  22030600                                                        <-------TEIL                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                                     --------->HSFC1(2)                                                     --------->HSFB2a(1)                                               ---------->DOF2                                            --------->ANAC58                                      <----------DOF2<---------HSFC1(2)                             <                                 <---------ALFIN1    <---------HSFB2a(1)                            < ----GLK1(2)              --------->CCA1(2) --------->ANAC58       --------->ATHB12  <---------ETT(2)   tctcgctcgatttagatgtgtttgcaagagatggaacactcttttcaaggaaaggaggttcttcaacagtgatttgggtctcgcccgtccacaattcatc  22030700                       <---------ANAC46                      <---------DEAR3(1)               <---------ARR14(2)               --------->ARR11(3)                                                   --------->LBD16               <---------ARR11(3)                                            <----------TaMYB80               <---------GLK1(2)          ------>NtERF2                     <---------GLK1(2)               --------->ARR14(2)        <---------RAP2.3(3)                <---------ARR11(3)               --------->ARR11(1)       --------->RAP2.6(3)                 --------->ARR11(3)        <---------ARR14(2)     <---------MYB52(1)                           <---------ARR14(2)        --------->GLK1(2)--------->ALFIN1<---------RAP2.6(2)                --------->ARR14(2)<------        --------->ARR14(2)     --------->DOF5.7(2)               <---------ANAC58  --------->LBD16 ---------ANAC58--------->CCA1(2)   --------->YAB1               <---------ANAC58 <---------LBD16 ---------ANAC58--------->ARR14(1)  <---------ICU4         <-------TEIL   ----------->ARR10<---------   ttgcttgccgaatccaagatttgctcggtggacgttaatcttgacggcccatctatagaggtgcataacttgccctcagatattcccggttataaacttt  22030800                                                               --------->GLK1(1)                 <---------KAN4(1)            --------------->AGL15           ------->PIF5             <----------DOF2           <---------ARR14(2)           <-------PIF5          <-----------GT1<-----------HVH21            <---------ANAC46       -          --------->ANAC46 ----------->GT1   <-----------------AGL1  --------->ANAC58        -------- ----DOF2------->TEIL    <---------ANAC46    <-----------------AG    --------->ANAC58        <------- --GT1--------->AtLEC2----------->HVH21     -------->P        --------->ARR14(2)----------->HVH21   <   atatgcccatgcacgtcgaatattgcgacgggttatttctttatgcaacctgttatgggattgggatttgcaacccatggctgagacagattagatggtt  22030900                                                                       <------ZmHOX2a(2)                                                                      --------->ARR11(3)                                                                      <-----------ARR10                                                                      --------->ARR14(3)                                                                      <---------ARR14(3)                                                                      --------->AGP1                                                                      --------->ARR14(2)                                                                      <---------ARR11(3)                                                                      <---------AGP1                   --------->ATHB12              --------->ETT(2)     <---------ARR14(2)            <---------TOE2(3)          --------->ANAC58    --------->ANAC58           --------->ZAT14 -------->ARR14(2)<---------YAB1       --------->ANAC58    --------->ANAC58           <---------ZAT14 --->GT1 <---------YAB1              --------->CCA1(2) ========================HOX2a_HOX2a --MYB46(3) <---------TOE1(3)       --------->ARR14(2) =======================HOX2a_HOX2a ---------ARR14(2)--------->ICU4    <---------ARR14(2) <------ZmHOX2a(1)------>ZmHOX2a(2)          --   caaatccagttatgaaggttatgatttcagtgggatgggatacgacaatagtagacaggacaagcactacaagatcttagggtcttactgtacaaataca  22031000  Previous    Next  AGI:  At3g59610.1    Description:  F-box family protein / jacalin lectin family protein. Identical to F-box/Kelch-repeat protein At3g59610 [Arabidopsis Thaliana] (GB:Q9M1A7); similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT3G59590.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 22030530    to: 22032285    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version