Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------>MYB83                                                             <---------YAB1                                                            --------->TOE2(3)                                                           --------->ATHB12                                                           <---------ICU4                      <----------DOF2                      --------->YAB1                      <---------DAG2                      <---------ATHB12      ------>ZmHOX2a(1)                            <----------DOF2     ------>MYB46(1)         ------  <-----------GT1 <---------ZAT18              <---------ZAT18      ----------------->AGL1    ------- ----->TEIL      <<<<<<<ZML2                  <<<<<<<ZML2 --------->ICU4<---------ATHB12     -------- -----YAB1   --------->TOE1(2)             --------->HSFB2a(2) ---------->DOF2      --------->AHL20(2)   gaattttcctaataacctagaacacttttttttttttttgaatacctagaacactttaaaatcattaaagaccaatcttggaaaaaaaaaatcaataaaa  22024700                                                                                             --------                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                   <---------YAB1                                                                               <---------RVE1(1)                                                                        --------->ZAT6  --------->AHL20(2)          <-----------GT1                                        --------->MYB46(3)<---------AHL20(2) --------->ARR14(2)     --------->ATHB12                       <-----------GT1<---------ARR11(3) <---------ARR14(2)    <-------TEIL                         --------->YAB1    --------->ARR11(3) --->DAG2--------->ARR14(2)                                <---------YAB1     <---------GLK1(2)  ---- --->DOF2--------->KAN4(2)                              <---------YAB1--------->YAB1   --------->AHL20(2) ->YAB1  <---------ARR14(2)                          --------->ICU4  <---------ATHB12 <---------YAB1   gtggatttgaatatactctttcaaattcattagttcaatagcattggatttagcaattcttattataaccaataacactagattttttattaaaaaaata  22024800                                                 <---------ANAC58                                                 <---------ANAC58                                             <------------CBF                                            --------->ATHB12                        <----------DOF2                                           <---------AHL20(2)               <------------CBF                                           --------->AHL20(1)             <---------YAB1                                           <---------AHL20(1)             <---------TOE2(3)                                           --------->AHL20(2)            --------->YAB1                                        --------->AHL20(2)               --------->AHL20(2)                                        <---------AHL20(2)               <---------AHL20(2)   --------->YAB1                      <---------AHL20(1)              --------->AHL20(2)   --------->ATHB12     <---------YAB1 <---------AHL20(2)              <---------AHL20(2)    --------  <---------YAB1      --------->YAB1   --------->AHL20(1)        ----------->GT1    <---------DAG2 ->YAB1 <------ZmHOX2a(1)              --------->AHL20(2)       --------->DAG2   <-----------GT1<---- ----->GLK1(2)--------->TOE2(2)       --------->AHL20(2)      ---------->DOF2 ----------->GT1<-------   atctatgataggataacatatgaattatcatccaaaacaaattaatttattgcttgccaaaaaaaaaaggtatattaatattgttactttttcattttat  22024900                                                                                                    <                                                                                              -------                                                        --------->ANAC58                      <------                                                    <---------ANAC55(2)                       -------                                                   <---------TOE2(3)                       --------->AHL20(2)                          --------->ARR11(3)      --------->MYB52(1)                       <---------AHL20(2)                          <---------ARR11(3) <---------ZAT18         <---------YAB1        <---------                <---------AHL20(2)           --------->ZAT18   <---------AHL20(2)        <---------AHL20(2)    <------------CBF----------->GT1    --------->YAB1   --------->ANAC58                 ----------->TBP ->AHL20(2)   --------->ICU4     --------->ANAC55(2)--------->ANAC55(2)                  --------->AHL20(2) -------GT1   <---------YAB1 <----------DOF2 --------->ZAT14  --------->AHL20(2)       ----------->TBP --AHL20(2)<---------YAB1<---------CCA1(2)   <---------ZAT14 ----------->TBP    <-------TEIL <-------   tccacctattgttgttattattttgttatatctttatgtaatagtagtatactaacgtaagctataaaattctaatagaaaattcatctatatatatata  22025000    <---------LBD16                         ---------->DOF2   <-----------RAV1(1)          --------->MYB52(1)                            <------ZmHOX2a(1) ---------YAB1                 ----------->HVH21                 --------->LBD16 -->AHL20(1)                  --------->LBD16                    <---------LBD16 ---ARR11(3)                 --------->ANAC46                   <---------ANAC46 -->ARR11(3)     <---------ANAC46        --------->YAB1         <---------ANAC58              <------ --TBP <---------ANAC46      <---------ANAC55(2)                <---------ANAC58    --------->ARR14(2) --AHL20(2)  <------------CBF--------->ANAC55(2)       <<<<<<<ZML2     <------------CBF     <--------   ttcttatgggggtgtaattgtgtaaactcgtccgtaacagataacataatgcaactagaacaacttccgtgggaattggaggaaagaatactcactttga  22025100                                                                                          ------->PIF5                                                                                          <-------PIF5                                                                                          <-------MYC3                                                                                          ------->MYC2                                                                                          ------->MYC3                                                                                          <-------MYC2                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                <--------HAHB4                           ------>ZmHOX2a(2)                                    --------->ATHB12                          <------ZmHOX2a(2)                                     <---------ICU4                         --------->ARR14(2)                                    --------->ICU4                         <---------AGP1                                        <---------YAB1                         <---------ARR11(3)                                  <---------ICU4                         <---------ARR14(2)                                  --------->YAB1    ---------->DOF2      --------->AGP1            <----------DOF2          <---------ATHB12<-------- ---YAB1                 --------->ARR11(3)  <---------GLK1(1)    ----------->GT1      <---------ANAC58 --DOF2                 <---------CCA1(2)  <xxxxxxxxxxxxxxxxsmallRNA(i) <---------YAB1 <---------ANAC58   ttccaacaaagtgtctcgctctattcagatctgtttgcaaacgatggaactctctttcaaacgagagaaggtttatcaataatcatttggctcgtgccca  22025200                               --------->ARR11(1)                               <---------GLK1(2)                               --------->ARR11(3)                               <---------ARR11(3)                 <---------WOX13(1)    <---------ANAC46                <---------ANAC58--------->CCA1(2)                <---------ANAC58--------->ARR14(1)               --------->ATHB12<---------ARR14(2)     --------->ATHB51    <------ZmHOX2a(2)     <---------ICU4      --------->CCA1(2)     <--------ATHB1     <---------ARR14(2)    <---------ATHB51    <---------ARR11(3)          --------->YAB1    <---------ATHB12    --------->ARR14(2)   ----------->GT1    --------->ICU4      --------->AGP1<---------DEAR3(1)                                         <--- -ZAT18       <---------YAB1   --------->ARR14(2)   <---------ICU4         <-------TEIL   -------->P   tccacaataattcatcttgattgccagatccaagatttgctcggtggaagttaatcttgatgttccatccatagaggtgcatagccataacttaccctca  22025300                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                    --------->ANAC58                                                                                    --------->ANAC58            --------->YAB1                                                        <---------GLK1(1)           --------->ICU4                         --------->MYB52(2)              --------->GLK1(1)           <---------YAB1           <---------KAN4(1)<---------MYB46(3)           --------->CCA1(2)      --------->LBD16      --------->RAP2.6(3)   <---------AtMYB61               --------->ARR14(2)     --------->LBD16      --------->MYB52(1)    <--------P                       <---------ARR14(2)    <---------LBD16      ----------->HVH21  <---------ANAC46               <---------ARR14(2) ------CCA1(2)         <---------ICU4    ----------->HVH21 <---------YAB1  --------->ARR14(2)   tatattcccggttataatggtttcttcatgacggtcgaatattgcgacgggttagtggtttatgctaccgagaacgggattgggatatgcaacccattgt  22025400                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      --------->ARR14(2)                                                                                      <---------ARR11(3)                                                                                      <---------ARR14(2)                                                                             --------->ATHB12                                                       --------->ANAC58      --------->YAB1                                                       --------->ANAC58      <---------ICU4                                                     --------->CCA1(2)      <---------ATHB12    <----                                              <---------ANAC58              --------->ICU4      <----                                  <---------YAB1    --------->ARR14(2) --------->LBD16--------->ARR14(3)                                  <---------TOE2(3) <---------ARR14(2)--------->ANAC58<---------AGP1                                 <-----------GT1--------->ALFIN1      --------->ANAC58--------->ARR11(3)                       ---------->DOF2        <---------ANAC58  <---------HSFB2a(2)   <---------ARR14(3)               <------ZmHOX2a(2)--------->YAB1<---------ANAC46  --------->HSFB2a(2)   --------->AGP1   tgagacagattagatggatcaaatccaaagtgaattatcgttacaatggggtgggatacgacaattctagacccgaaaatcattacaagatctttgagtc  22025500                                                           <---------GLK1(1)                                                           --------->GLK1(1)                                                     <---------AtLEC2  --------->SPL7--------->ATHB12                                                    <-------TEIL     --------->TOE1(2) <---------WOX13(1)                   --------->LBD16               --------->At4g35610 <---------SPL7 <---------YAB1     ---------->DOF2  ---------->DOF2        <---------ARR14(2)    --------------->AtSPL3 -----ANAC58       --------->At5g28300       --------->ARR14(2)    <---------------AtSPL3         <-- -----ANAC58      ------->GAMYB             <---------CCA1(2)    ------------------>SPL14      <-----   ttgcccctatagcgatacaaccgtgaaagctagtatcaccgagtttgtatccgatgcatggatttcgaaaccgtacgagtttgcatatgattgggatttt  22025600  Previous    Next  AGI:  At3g59590.1    Description:  jacalin lectin family protein. similar to F-box family protein / jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT3G59610.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 22025144    to: 22026745    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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