Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------GLK1(1)                --------->At4g35610                                              --------->ANAC58                  --------->YAB1 ----->YAB1                                   --------->ANAC46                --------->ANAC58 ------ICU4                          ----------->RAV1(2)                      --------->ANAC58 -----ATHB12             <---------ICU4       --------->ANAC58             <-------TEIL          <--- -->WOX13(1)      ------>ZmHOX2a(1) --------->ARR11(3)            --------->DOF5.7(2)  <----------ID1   catcacaactggtctcattcctgtgcataatgccagaacatctggtccaagaaacccgatttagcatcgtttacagattcaagcatatgacaacaaattg  21996900                                                     <----------DOF2                                            --------->ANAC46          --------->GLK1(2)                 --------->ANAC58                        ---------->DOF2         <---------GLK1(2)       <----------DOF2    <---------ANAC58               --------->YAB1   --------->ZAT6            ------->TEIL   --------->ANAC58<----------DOF2       <---------ATHB12 ------TOE2(3)  <---------ZAT6   <---------DAG2     <---------ANAC58            --------->WOX13(1)   agataatactagaatctagtgttgatatatgaacgctttataatgcacgaaatggctttattctttgggttcttaaacagagcaatcaaagcaccatcaa  21997000                                                                                           ----------                        --------->ANAC58                                                 <---------YAB1                     ------>ZmHOX2a(1)                                             <---------YAB1               <---------ANAC58           <---------ARR14(2)                     --------->YAB1               <---------ANAC58           --------->ARR14(2)                     <---------ICU4             <-----------GT1  ----------->GT1                                   <---------ATHB12     --------->GLK1(2)  --------->ANAC58 <----------TaMYB80       --------->ARR14(2)  ------->TEIL   acttaagaatcaatttttcgttcctcaaggaattgttaagagcatatactcatataaactataacccaaattcccaaattgaatcatgaatatcaaagag  21997100                                                 <-------GAMYB                                                <---------MYB46(3)                           <-------                                               <---------ANAC46                            --------->ANAC58                                               <---------ANAC58                            --------->ANAC58                      <---------GLK1(1)        <---------ANAC58                        --------->ANAC58               --------->DAG2                 <------NtERF2                            --------->ANAC58              ---------->DOF2               <---------DEAR3(1)                 ------>ZmHOX2a(2)      --------->TOE1(2)                 <---------HSFB2a(2)                   <---------At4g35610 >DOF2--------->TOE2(2)                 --------->HSFB2a(2)                   --------->At4g35610   <   tcgcaaaacataagaaaaaagtggaattcatgagacctatttcgagacggcgtttggaattgctcttgagtctccatttgatctgagagaggcaagaact  21997200                             --------->MYB46(3)                           --------->ARR14(2)                     <---------ZAT2                                   ---------->ID1                ------>ZmHOX2a(1)              --------->DAG2       <-----------RAV1(1)            --------->ARR14(2)      <---------ARR14(2)       <<<<<<<<<TBF1 --ARR11(3) <---------ARR14(2)      <---------GLK1(2)   <----------DOF2                  <-----------GT1 ---------GLK1(2)    --------->ZAT2 --------->ARR14(2)<---------At4g35610    --------->YAB1   <------   cagaaactgaagtagttcctcagagcttggaacctccatattcgcagaaaaattggagctttcttcttctctgtcgcaataagactcagtgatacccttt  21997300                                                                                                    -                                                                                                    -                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                --------->YAB1-------                                                                              --------->AHL20(2)   --                                                                           --------->TOE2(3)---------                                                                           --------->TOE1(3)<--------                                                                           <----------DOF2 <---------ATHB51                             ------------>CBF                       --------->ANAC58       <---------ATHB12      <---------TOE2(2)     *TSS      ------->TEIL                  --------->ANAC58   ------------>CBF      <---------TOE1(2)     <-----------GT1                --------->YAB1  ========================== ----DOF2              <------ZmHOX2a(1)       <----------DOF2    <---------ALFIN1   --------->ZAT6--   ctctatcggacgttttgttcttagaggaaattacaatatggaccctaaactttctagtttctcataacacaccctaactttaaaataacaccaattatgt  21997400    <-------PIF5    ------->PIF5    <-------MYC4    <-------MYC2    ------->MYC4    ------->MYC2                                        <-------PIF5    <-------MYC3                                        ------->MYC4    ------->MYC3                                        ------->MYC3   --------->ANAC55(2)                                  ------->PIF5   >>>>>>>>>>HY5                                        ------->MYC2   <---------TGA1a                                      ------->PIF4   <---------O2                                         <-------PIF4   --------->O2                                         <-------MYC2   --------->TGA1a                                      <-------MYC3 <---------ALFIN1                                       --------->TOE1(2) <------------OsbHLH66                                  <-------MYC4 -------->DEAR3(1)                                     =====================================bZIP_DOF -------->MYB46(3)                                     --------->TGA1a ------HVH21                                           <---------TGA1a                <----------DOF2 ---bZIP60(1)                 ----------->TGA1         <---------O2              <---------DAG2 -->TGA2(1)                 <---------At4g35610        =====================================bZIP_DOF -->bZIP60(1)               --------->At4g35610        --------->O2          --------->ANAC46 ------->ANAC58   --------->ANAC46                    ------------>OsbHLH66  --------->ANAC58 >YAB1           <---------LBD16                     <------------OsbHLH66   --------->ANAC58 -ICU4<-----------HVH21    --------->ALFIN1   <---------ARR14(2)           --------->ANAC46        <- ============bZIP_DOF --------->ALFIN1        ------->TEIL    ------------>CBF   <----------DOF2<---- ------->ANAC58<---------REM1(2)              --------->ARR14(2)       <-----------HVH21   <---------MYB52(1)   cacccacgtgtcaagttttcacgggaggggtgatgacgaagaacaacgtattttcacacgtgcgaacaataggcttcacacgacttttctttcgttattt  21997500                                              <------NtERF2                                            ----------->HVH21                           ------>ZmHOX2a(2)                                            --------->DEAR3(1)                          =============                                           --------->DEAR3(2)                          <------ZmHOX2a(2)                                          <---------At4g35610            --------->ANAC58                    <---------DAG2        --------->At4g35610            --------->ANAC58                    <----------DOF2 <---------ARR14(2)              --------->LBD16    ==============            ------>ZmHOX2a(2)       <-----------ARR10              ------->GAMYB      <---------AGP1          <---------AGP1            --------->ARR14(2)            <---------LBD16     <---------ARR11(3)     <------------CBF             --------->LBD16                --------->MYB52(1)   --------->ARR11(3)  <<<<<<<<<<<<<<<<<LFY           --------->ANAC46                -------->P ---------->DOF2        -- ----------GT1    *TSS        <-----------GT1------>NtERF2    <---------ATHB12        --------->ARR14(2) -----AHL20(2)  <---------ATHB12<---------LBD16     <---------At4g35610---------->DOF2--------->AGP1   ttttccacattggatctaatcacttttgcaattcaccggaacttagccgacgagcgctgatcaaatcaaccggagaagcaaagctatagatctactatct  21997600                                                   <---------MYB46(3)                                                  <---------WOX13(1)                                               ------>ZmHOX2a(1)                                               <---------YAB1                                           --------->ARR14(2)                                           <---------ARR14(2)                                          ------>MYB46(1)           <-----------HVH21              ------>MYB83 ------------>AtMYB77                   <---------MYB59 =====HOX2a_HOX2a                      ----------------->AG =====HOX2a_HOX2a                    <-----------GT1  <-----------GT1 ---->ZmHOX2a(1)                  <---------ICU4--------->ATHB12 ---------->ID1   <---------CCA1(2)   ccttcacagttgctatcaggtctgtgttcgtcttcatttttaccaaatcctgattgttacaattttcttcgttttcttctgtgtttatcttcgttttctt  21997700                            --------->ARR14(2)                   <---------ANAC58                                                  --------->ANAC46                   <---------ANAC58                                               --------->ARR14(2)              <---------RVE1(1)                         --------->ANAC58          <---------ARR14(2)              <---------CCA1(1)                         <---------ANAC55(2) --------->LBD16             --------->ARR11(3)   <---------GLK1(2)     --------->ANAC58   <---------LBD16             <---------ARR11(3)   --------->ARR14(2)    <---------ANAC46  ----------->RAV1(2)      <---------AHL20(2)    --------->GLK1(2)<---------TOE1(2)        <---------GLK1(1)           ---      <---------ATHB51      <---------ARR14(2)         <---------LBD16--------->GLK1(1)      <-------  --------->AHL20(2)       <---------GLK1(1) <---------TOE2(2)       --------->ARR14(2)      --------   cggtttaaataatgggatatttcttgtcgaaatctggattctatgcgcatgtttagtcacggataatatcggaaacccctggagtatcagcaatgtcgta  21997800  Previous    Next  AGI:  At3g59490.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO64819.1) Range:  from: 21995608    to: 21997328    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g59500.1    Description:  integral membrane HRF1 family protein. similar to integral membrane HRF1 family protein [Arabidopsis thaliana] (TAIR:AT1G30890.2); similar to integral membrane HRF1 family protein [Arabidopsis thaliana] (TAIR:AT1G30890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64820.1); contains InterPro domain Hrf1 (InterPro:IPR005578) Range:  from: 21997518    to: 21999303    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version