Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------ATHB12                  <-----------GT1                                                     --------->AHL20(1)                 <---------YAB1                                                 ----------->GT1           <---------AHL20(2)                                               --------->ATHB12      ---           --------->AHL20(2)            <-----------------AGL1  <---------AHL20(2)   <---------AHL20(1)           --------->AHL20(1)      <-----------GT1    --------->ARR14(2) --------------->AGL15-------          --------->AHL20(2)    <---------ICU4        <---------ARR14(2) ============================          <---------AHL20(2)  --------->TOE2(3)     ----------->ARR10  <---------YAB1 <---------AHL20(2) --------GT1   --------->YAB1--------->YAB1        <--------P    --------->AHL20(2)   --------->AHL20(2)   aaccttgcgaaattaaattataacaaatcattcattaatacatttcgattttggtagatttgcctaaaaaattatccatgaatggtattttattgaaaaa  21993600                                                                                           <---------                                                                                    --------->MYB46(3)                                                       <----------DOF2         --------->YAB1                                                    --------->ARR11(3)<---------------AtSPL8 --------                        <---------LBD16       --------->YAB1    --------------->AGL15      ----------                    <---------AHL20(1)    ----------->GT1       <---------------AGL15     <---------ARR14(2)                    --------->AHL20(1)    <------ZmHOX2a(1)    ----------------->AGL2--------->MYB52(1) ------->DOF2       <---------ARR11(3) <------ZmHOX2a(1)  <-----------GT1      --------->TOE2(3) --->DOF2       --------->YAB1   ---------->DOF2    <---------ARR11(3)--------------->AtSPL8 -------- ===============================================================================MADS_MADS --------->ARR14(2)   gaaagttatccaaaacaaacaaaatattcggagtcaaaagaggaggattaatagtatcttttactccccttaatagtactatcttaacaacggataagcc  21993700   <---------AHL20(1)   --------->AHL20(1)                                                             --------->ZAT6   --------->AHL20(2)                                                           <-----------GT1   <---------AHL20(2)                                    ----------->GT1 --------->YAB1  --------->AHL20(2)  --------->ANAC46               <---------ARR14(2)  <---------ICU4             - -TaMYB80            <-------TEIL                    --------->ARR11(3)  <-----------GT1            < ->ANAC58    ----------->GT1     --------->PCF2      --------->GLK1(2)  <---------ATHB12           <- >DOF2  <-----------GT1  <---------ANAC46         --------->AHL20(2)  --------->YAB1             ---- ->ANAC58  --------------------->WRI1          --------->YAB1      --------->TOE2(3)             ----   cctaataaattaaccttgtgaaatacgtcgtctaggtcccattgaagaagcataaaatctggtcaaaaacattaatcactatttactctaaatctcacca  21993800                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                                    <---------RVE1(1)                                                                    --------->RVE1(1)                                                                    <---------GLK1(1)        --------                                                                    --------->GLK1(1)   --------->AHL20(2)                                                                    --------->CCA1(1)   <---------AHL20(2)                                  <---------YAB1       ------>MYB46(1)                <----------DOF2 -------->YAB1                  <-----------GT1        ------>MYB83<---------ARR11(3) <-------------- ---------ICU4      --------->MYB46(3)               <---------MYB59<---------CCA1(1) --------------- --------ATHB12    --------->ANAC58                  <---------MYB46(2)             <---------ATHB12 -->MYB46(1)       --------->ANAC58               <-----------GT1  --------->ARR11(3)<--------------- -->MYB83        --------->MYB46(3)   --------->AHL20(2)          <<<<<<<<<RAP2.2 --------->WOX13(1)   aatcataacatatatgtaaacaaccaatagaatattacgattaaaaaataagttaccaaacacagtttagatatcttatctgatcaatctttaaatggat  21993900                          <---------ANAC46                   ---------->DOF2                 <---------AHL20(2) --->GT1         --------->AHL20(2)           --------->MYB46(3) -AGL15      --------->ICU4               --------->MYB46(3)       <-----------GT1                *TSS >AGL15      <---------AHL20(2)--------->ARR14(2)              ----------->TBP                  ----- --AGL3      --------->AHL20(2)<---------ARR14(2)         --------->TOE2(3)<---------GLK1(2) --------   aaatttgaatttgtattaattaaaagtcttgtggatttgactaaaccactcaccctaatacctctatataaacccttgattctctctaatacctctcatt  21994000                                                                                        --------->MYB52(1)                                                                                       ----------->HVH21                                                                                      <---------MYB52(2)                                                        <------ZmHOX2a(2)            --------->At4g35610                                                    --------->SPL7                   <---------At4g35610                                                  <---------SPL7                    ------->TEIL          <---------GLK1(2)                       --------->TOE1(2)   <-----------------AGL3 <------- ---->AHL20(2)                             --------->YAB1--------->YAB1    <---------ICU4  ------->GAMYB ->YAB1--------->YAB1                      --------->TOE2(3)        ------>NtERF2 <------NtERF2   ---   atatccaaaacataatctctctctatctctctctattttgctcaatcttaatcgtccgatcaaaacactccgactaaaaatggctgcatctaacggcgag  21994100                                                           ------->TEIL                                                    <---------LBD16                                                  <---------ARR14(2)                                                  --------->ARR14(2)                               <-                                                <-----------HVH21                                 <--                                               ------->GAMYB                                      <--                                              --------->MYB46(3)                                  ---                                              <------------AtMYB77                               <---                  ----------->GT1            ------>MYB46(1)                                    -----                 <---------DEAR3(1)          -------->P    <---------ARR14(2)                 <------             <---------ZAT2                  ------>MYB83  --------->ARR14(2)      --------->REM1(1)-        ------>ZmHOX2a(2)                   --------->MYB52(1)      --------->DEAR3(1) ---------->DOF2 --ANAC46    <---------At4g35610      <---------ANAC58    <---------CCA1(2)  ------>ZmHOX2a(1)<------ ------->DOF2--------->At4g35610      <---------ANAC58--------->LBD16      ----------->RAV1(2)<------NtERF2   aaaagcttgatcgtgagcttcggtgaaatgctcatcgatttcgtcccaaccgtctccggtgtatccctcgccgatgctcctggcttcatcaaagcccccg  21994200        ------>MYB83        ------>MYB46(1)      <-------PIF5      ------->PIF5      --------->MYB46(3)      <---------MYB111(1)     --------->At4g35610     <---------At4g35610     ----------->RAV1(2)     --------->ZAT2    ------->TEIL                                        <-------GAMYB   <---------ALFIN1                                    <---------ANAC58  <---------ZAT18                                 ------>NtERF2  --------->ZAT18                            <---------SPL7 --------MYB46(3)                           <---------ANAC58 -------DEAR3(1)                            <---------MYB46(3)                                      < -------AtMYB61                             <---------ANAC58                        <-----------HVH21 ------>ALFIN1                             --------->ALFIN1                        <------MYB46(1) <- ------MYB52(1)                           <-------GAMYB<---------ANAC58            <------MYB83   --- ---->LBD16                               <-----------HVH21                       --------->MYB59---- -----RAV1(2)                           <---------RAP2.6(2)           ----------->HVH21         <---- ---------------------->TaNAC69(2)      <---------DEAR3(1)            ----------->TGA1   ------->MYC3 ---LBD16                          --------->REM1(2)<----------DOF2  <-----------HVH21   <-------MYC3   gtggtgcacctgccaacgttgccatcgccatttcccgtctaggcggtcgtgccgctttcgttggaaaactcggtgacgacgagttcggtcacatgctcgc  21994300                                                                                       ----------->HVH21                                                                        --------->MYB52(2)                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                       <-------TEIL   ------>ZmHOX2a(2)                                                                    <---------ANAC58 --------->CCA1(2)                                                                    <---------ANAC46 <------ZmHOX2a(2)                                                                    <---------ANAC58<---------AGP1                                                                 ------->PIF5       <---------ARR11(3)                                                             <---------ZAT14        --------->ARR11(3) --------->GLK1(2)                                           --------->ZAT18        --------->AGP1 --------->ARR14(2)                                          <---------ZAT18        <---------ARR14(2) <---------ARR14(2)                                          --------->ZAT14        --------->ARR14(2) ---------GLK1(2)        --------->At4g35610              --------->RAP2.6(3)     ----------->ARR10 -----NtERF2             <---------ZAT2                  ===================================HOX2a_HOX2a ------>LBD16            --------->ZAT2                  <------ZmHOX2a(1)----------->HVH21 ----->LBD16             <---------At4g35610             ====================================HOX2a_HOX2a -----LBD16  --------->MYB52(1)            <<<<<<<<<<<<<<<<<LFY  <-------PIF5--------->ZAT6   cggaatcttgaaacagaacggtgtctctgctgaaggtatcaatttcgacactggagccaggactgcacttgcgttcgtgacactaagatctgatggagaa  21994400                                                                                   <---------MYB52(1)                                                                                  --------->TOE2(3)                                                                                --------->SPL7                                                                                ------->TEIL                                                ------>NtERF2               --------------->AtSPL8                                               ----------->HVH21            <---------------AtSPL3                                              <---------HSFB2a(2)           ------>ZmHOX2a(2)                                              --------->HSFB2a(2)           --------------->AtSPL3                                              --------->DEAR3(2)           <------ZmHOX2a(2)                               <---------MYB52(1)                         <---------AGP1                       --------->STY1(1)     --------->SPL7               --------->ARR11(3)                       <---------STY1(1)   <---------SPL7                 --------->ARR14(2)        <                  <---------ARR14(2)       <-----------HVH21              <---------ARR14(2)    -----                  --------->ARR14(2)      --------->DEAR3(1)              <---------ARR11(3)    <----               --------->HSFB2a(2)      ------>ZmHOX2a(1)             <---------At4g35610   <--------               <---------HSFB2a(2)     <---------ALFIN1          --------->bZIP60(1)     <---------YAB1              <---------LBD16 <---------RAP2.6(3)                <---------bZIP60(1)  <---------YAB1-             --------->MYB52(1)<---------ARR14(2)           --------->YAB1--------->AGP1<---------AHL20(2)    <-------TEIL--------->LBD16--------->ARR14(2)    --------->At4g35610 <---------CCA1(2)<---------AHL20(2)   cgtgagttcatgttctaccggaaccctagtgccgatatgctcctccgtcccgacgagctcaatcttgatgtcatcagatctgtacgttatttttattttt  21994500  Previous    Next  AGI:  At3g59480.1    Description:  pfkB-type carbohydrate kinase family protein. Identical to Probable fructokinase-4 [Arabidopsis Thaliana] (GB:Q9M1B9;GB:Q8LCW0); similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT2G31390.1); similar to unknown [Populus trichocarpa] (GB:ABK92748.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) Range:  from: 21993998    to: 21995575    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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