Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->YAB1                                                                 <---------YAB1 --------->GT1                   <-----------GT1            <------ZmHOX2a(1) ----AHL20(1)             <---------TOE2(3)  <---------AHL20(2) <---------AHL20(2) ----AHL20(2)            ---------->DOF2     --------->AHL20(2) --------->AHL20(2) --->ARR11(3)      <------ZmHOX2a(1)    ------->TEIL      <---------TOE2(3) --->AHL20(1)  ---------->DOF2   <---------AHL20(2) <----------DOF2         <---------AHL20(2)    <--   attgaaaaaatgttttaaaaaggattttaaagtatttacatgtatatttaaaaactttataaggattttaataagttttaaaatggtttacaagagtttt  21954800                                 <---------ARR14(2)                                 --------->ARR11(3)                                 --------->ARR14(2)       <-----------GT1         ---------->DOF2         <---------GLK1(2)    <------ZmHOX2a(1)      <-----------GT1   <----------DOF2             <---------TOE2(3)    <---------TOE1(3) ---------GT1 <----------DOF2   <------ZmHOX2a(1) ---------->DOF2        <---------TOE2(3)         <-   taacaattttacaaagctttaaaaaactttactaggattttctaagaatttttaaaggatttacaatggttttttaagggttctaaacaaaattagaaag  21954900                          --------->MYB52(1)                    ----------->GT1                    <------NtERF2                  <---------ANAC46                  >>>>>>>>>>E2Fa                  <---------ANAC58                  <---------ANAC58     <---------AHL20(2)                 <---------AtMYB61                 <<<<<<<<<E2Fc        --------->AHL20(2)           <--------P                 <---------LBD16      <---------AHL20(2)         <------MYB83                 <<<<<<<<<E2Fd        --------->AHL20(1)         <------MYB46(1)           --------->AHL20(2)  ----------->GT1                  <---------MYB46(3)           <---------AHL20(2)----------->GT1                    --------->MYB59 --------->AHL20(2)--------->LBD16    <---------AHL20(1)       --------->ALFIN1 ---------DOF2<xxxxxxxxxxxxxxxxsmallRNA(i)                  <---------TOE2(3)                 <------   actttaaatgcaattttttggcgggaaaaaacagagaaaataaaattttggcacttaaaatttaggtgggtaagttttggtttctaactacatgttctca  21955000                                                                          --------->YAB1                                                                       <---------GLK1(1)               <---------AHL20(2)                                      --------->GLK1(1)              <---------AHL20(2)                                      --------->ARR11(3)              --------->AHL20(2)                                      <---------ARR11(3)             <---------WOX13(1)                                      <------ZmHOX2a(1)           --------->ATHB12              <---------MYB46(3)      ---------->DOF2          <---------YAB1             --------->DAG2         ----------------->AGL1               <---          --------->ICU4            ---------->DOF2         ----------------->AGL3        <---------ANAC46       --------->ICU4             <---------TOE2(3)         =========================================       <---------YAB1       <---------TOE2(3) <---------YAB1----------------->AGL2 <------------CBF - ---YAB1--------->YAB1   --------->ICU4  ----------->GT1  <----------ID1 <---------YAB1<---------TOE2(3)   ttagatttgatgatgattaatttagtcattttggttaagaaagtggttatttttaaaaatgggccaaaaaaggatatcatagtagaattgtggtttgggc  21955100                                                                           <---------LBD16                                                                          <---------ANAC46                                   <---------DAG2                        --------->ATERF1(1)                  <---------------AGL15                                  --------->ALFIN1                  --------------->AGL15                             ------>ZmHOX2a(2)              <- -------DOF2  <---------ALFIN1     <----------DOF2                --------->ARR14(2)           ------ =================================MADS_MADS   <---------HSFB2a(1) <---------ARR14(2)  ------->TEIL <- --------->DOF2  ----------------->AGL2<---------AtLEC2*TSS  <----------DOF2<------NtERF2    --------   ttaaaagcccattacccctcccctaattagttttcaacttttcatggagtcttcggttttcgactttggatcggagtcggggaacatgaatttcgacgag  21955200                                     --------->TCP16(1)                                     --------->PCF5                                     --------->PCF2                                <---------O2                                <---------TGA1a                                --------->TGA1a                                                     -                                <---------ANAC58                                                <----                                <---------bZIP60(2)                                             -----                          <-----------HVH21                                <------NtERF2       ------                        <---------AtMYB61                                 ------>NtERF2 --------->ANAC58                        --------->ALFIN1   --------->WRKY12              <---------PCF2 --------->ANAC46                      <---------ANAC46     --------->WRKY38(1)         <---------MYB46(3)      <----- --------ANAC58 --------->ATHB12--------->O2                    --------->GLK1(2)    <---------REM1(2) ----->HVH21   --------->MYB46(3) --------->ALFIN1              <---------ARR14(2)<---------ANAC58 <- --------ANAC58<---------ATHB12 <---------ANAC46                --------->ARR14(2)<---------ANAC58<-- ->ANAC46    --------->MYB52(1) <---------ANAC58   <------ZmHOX2a(1)  --------->ALFIN1  --------->ANAC58   accgtgccactgagccaacgattggagtggtcagacgtggtcccattgactcaggacgatggtccgaatccagtggtgccaattgcctacaaggaagagt  21955300                                                                     --------->ANAC55(1)                                                                     --------->ANAC55(2)                                                                     --------->ANAC46                                <---------DAG2          <---------ZAT18 --------->ANAC46               <----------DOF2         --------->ZAT18     <-----------GT1 -------->LBD16              <-----------GT1           --------->ANAC58  --------->ANAC58 -----ARR14(2)             <----------DOF2             --------->ANAC58  --------->ANAC58 ---->ARR14(2)       --------->LBD16                ------>ZmHOX2a(1)<---------ANAC55(2) --->GLK1(1)        <---------ANAC58            ------>ZmHOX2a(2)    --------->ANAC58          ------ ----GLK1(1)        <---------ANAC55(1)        <------ZmHOX2a(2)     --------->ANAC58          ------ --------ANAC46     <---------ANAC46           <---------GLK1(1)    <---------LBD16 ------>ZmHOX2a(1) -------LBD16       <---------ANAC58           --------->GLK1(1)   --------->MYB52(1)        <-------   tccgcgagactatggattacttccgtgcgatttacttttccgacgagcgatctcctcgcgcactacgactcacggaagaaaccctcctcttaaactccgg  21955400                                                                                                    <                                                                                                    <                                                                                               <-----                                                                                              ------>ZmHOX2a(1)  --------->ZAT14                                                                            <-------  <---------ZAT14   <---------YAB1                                                   --------->ATHB12 >NtERF2        --------->TOE2(3)                                                   <---------AHL20(2) --->LBD16   --------->WOX13(1)     --------->MYB46(3)                <---------WOX13(1)     <------- --LBD16   <---------ATHB12  <---------AHL20(2)       <---------TOE1(3)           <----------DOF2   <   caactacacagtaatcaatcttataattcatataatcaacaactatctgaactcttatggttttgaaatttgatggattttagtcttttattggtccttg  21955500 ---------ANAC58 ---------ANAC58                    <----------DOF2 ------RAV1(1)                     --------->TOE2(3)       ------>NtERF2          <---------ICU4 --ANAC58             <---------RVE1(1)                  --------->ATERF1(1)      --------->YAB1 --ANAC58    <---------ZAT6     <-----------GT1       <-----------RAV1(2)         <-----------GT1 --- ---------ANAC46     <---------MYB52(1)     --------->ALFIN1<------NtERF2------>NtERF2            <--   ttgcttcaatttttagtcttaccgatatttttgtttacctttgaaggtgtggcatttcaggcgcctagtactcgaggcccttaatcacgacttgtttgaa  21955600                                                        --------->DAG2                                                    ----------->GT1                                               ------>MYB46(1)                                             --------->MYB46(3)                                             --------------->AGL15                                             <---------------AGL15               --------->ANAC58              <---------MYB111(1)               --------->ANAC58             <-----------------AGL1            <---------SPL7                  ----------------->AGL1 <----------DOF2           XXXXXXXXXXXXXXXXXXXX>MIR397B  --------->MYB46(3)    <---------CCA1(2)       <-------TEIL             --------->ZAT6 ------>MYB83 <-------TEIL <---------ALFIN1 ------>ARR11(3)           <------ZmHOX2a(1)<-----------------AG  <---------DAG2              <------ -------ARR11(3)         <---------TOE2(3) -------->P  ---------->DOF2 <-----------GT1------>ZmHOX2a(2)   gaactcgagttcatcgaacgcattgctgaggataactctaagaactaccaactgtggtaaagttcataccttttcacaccttgtttgatctatgtgcttt  21955700  Previous    Next  AGI:  At3g59380.1    Description:  FTA (FARNESYLTRANSFERASE A); protein prenyltransferase. Identical to Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (FTA) [Arabidopsis Thaliana] (GB:Q9LX33;GB:O65346); similar to protein binding / protein prenyltransferase [Arabidopsis thaliana] (TAIR:AT4G24490.2); similar to protein binding / protein prenyltransferase [Arabidopsis thaliana] (TAIR:AT4G24490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64782.1); contains InterPro domain Protein prenyltransferase (InterPro:IPR008940); contains InterPro domain Protein prenyltransferase, alpha subunit; (InterPro:IPR002088) Range:  from: 21955155    to: 21956920    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version