Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---               --------->YAB1                                                                     <--              <---------ATHB12                                                                    <--            --------->WOX13(1)                                                                   ----          <---------ATHB12                                                                       ----      <---------ATHB12                                                                         ------    --------->WOX13(1)                ----------->GT1                                         -------  <---------ATHB12                  <---------MYB52(1)                             -------->P<------- -------->WOX13(1)      ----------->GT1  --------->YAB1              --------->TOE2(3) --------->At4g35610 ->TEIL --------->WOX13(1)         --------->TOE2(3)         --------->LBD16     --------->MYB46(3)<-   ttcaatcaatcaatcaatcatacaacgagaaaattttcgttagtaataaacaccaaaattttccgaaattatctcaaaatgaaacaaccagttgaataat  21921300         --------->YAB1   <---------MYB59  --------->ANAC58  --------->ANAC58 ------->TEIL --------->SPL7 -------ANAC58 ------>ANAC55(2) -------ANAC55(2) -------ANAC58                                                                --------->AtLEC2 ----------->AtSPL8                                                           <---------YAB1 ----------->AtSPL3                  <-----------GT1                        --------->YAB1 --->GLK1(2)        --------->ZAT2<---------AHL20(2)                       <---------ATHB12     <---- -->KAN4(2)         ----------->RAV1(2)                            --------->ARR11(3)         <------ --KAN4(1)          --------->At4g35610            --------->TOE2(3) ------>ZmHOX2a(2)      --------- --------SPL7       <---------At4g35610         ----------->RAV1(1)<---------ARR11(3)--------->TOE2(3)   ccgtacccaattcataaaacccatctgcctctctaatttatacaattgaacaacataaatctaatagatgatctcaaatcatgctaacatcaattgattt  21921400                                                                                                 <---                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                                                                       --------->ANAC46                                                                                      --------->MYB46(3)      <---------YAB1                                                               <---------GLK1(1)    --------->YAB1                                                                 --------->GLK1(1)   <---------ATHB12                                                               --------->ARR14(2) ------>MYB83                           --------->ANAC58                         <------ZmHOX2a(1) ------>MYB46(1)                   <----------ID1--------->AHL20(2)           <------ZmHOX2a(1)  <--- -------GT1         --------->ANAC58    --------->ANAC58                    --------->ALFIN1     ---- ---WOX13(1)        --------->ANAC58 <------NtERF2        ----------->GT1  <------ZmHOX2a(1)     <--- >ATHB12---------->DOF2        ---------->DOF2   --------->YAB1 --------->MYB52(1)<---------ARR14(2)   accaaatgataaaagagtcatcactcaagagattaaagcggcaagaaacaattaaaaatttggaaaaaacgaagagaggaggaggaaacccaccatggca  21921500                                                                ----------->GT1                                                           <------MYB46(1)                                                           <------MYB83                                                           <---------MYB46(3)                                                          <---------MYB46(3)      <---------WOX13(1)                                  --------->MYB46(2)    --------->ATHB12                                      --------->MYB111(2)   --------->AHL20(2)                                     <---------AtMYB61   <---------AHL20(2)                                     --------->MYB59 ------At4g35610                                         <---------MYB55(1) ---NtERF2     --------->AHL20(2)                        <--------P         <------ZmHOX2a(1) ----->At4g35610                                      <---------TOE2(3) ---------->DOF2 ------ZAT2----------->GT1                --------->ATHB12--------->MYB111(1)   gccgattaattgatggtttaaatctcgataagatgctaatctcttgattcgttttcgaggttggtagagaaataaaaaggacttgaaggaagaagggaat  21921600                                                                                               <-----                                                                                          --------->ANAC55(2)                                                                                          --------->ANAC55(1)                                                                                ----------->HVH21                                                                                --------->WRKY38(1)                                                                     --------->ANAC58     <---------ANAC55(2)                                                                     --------->ANAC58 ------>MYB83                                           <---------ANAC46          --------->ANAC46 ------>MYB46(1)                                  <-----------RAV1(1)                <---------ANAC55(2)  --------->ANAC58                      --------->TGA1a      <---------ANAC58          --------->ANAC55(2)  --------->ANAC46                      <---------TGA1a      <---------ANAC58          --------->ANAC55(1)  --------->ANAC58      --------->GLK1(2)   <-----------RAV1(1)       ---------->DOF2 <---------LBD16 <---------MYB59  >>>>>>>>>TBF1       =========================================bZIP_DOF         --------->WRKY12   *TSS   agaagaagaatctagggttctctcacttgtgttgttttgttgtgttcgtgtaataaaagtttgggagaaacacggaacaccgatgaccaaacacgaaaca  21921700                                  ------------>CBF                               --------->AHL20(2)                                 --------->ANAC46                 <---------ANAC58                                 --------->ANAC58  --------->ANAC55(2)           <---------AHL20(2)                                 --------->ANAC58  --------->ANAC46             --------->AHL20(2)                             <---------ICU4        --------->ANAC58             <---------AHL20(2)                             --------->YAB1        --------->ANAC55(1)    <---------At4g35610                             -------->HAHB4        --------->ANAC58       --------->At4g35610  <---------WOX13(1)      --------->YAB1           <---------ANAC55(2) <---------At4g35610 <------------CBF      <----------DOF2          <---------REM1(2) <---------ANAC58--------->WOX13(1) ------RAV1(2)         --------->TOE2(3) <---------GLK1(2)<---------YAB1  ----------->GT1   ggggattgatgcccaaggtcgttttctttaataatacccaatagaaactcaacacgtattatttatgggcttgggctgctaaataaatcaggcccatctt  21921800                  <---------At5g28300                 <---------WRKY18(1)                 <-----------GT1                                                                -----              <---------ICU4                                                                   <-----              --------->YAB1           <---------ZAT18                                         <-----            <---------YAB1             --------->ZAT18                                         <-----         <------ZmHOX2a(2)      ---------->DOF2                                             ------>ZmHOX2a(1)       <------ZmHOX2a(1)       <---------AHL20(2)                         ----------->GT1  --------->TOE2(3)     <---------TOE1(2)         --------->AHL20(2)                  --------->YAB1       <-----------GT1    --------->LBD16  <-------GAMYB     <---------ZAT14            <---------YAB1     <---------ZAT6   ctactccgaggatcaatattgaccgttgaaaaattaaagagttcacattcaatagtctgagtttatttatgaaaattggtatatttagtgtttccttact  21921900                                                                   <------MYB46(1)          <-----------GT1                                    <---------TOE2(3)  <---------DAG2                                           ---------->DOF2  <----------DOF2                                       --------->YAB1 ---------->AtSPL8              <----------DOF2   --------->YAB1   <------MYB83 <---------ANAC46 ----ANAC58           <----------DOF2            <---------YAB1    ----------->GT1 ----ANAC46        <---------TOE1(3)             --------->ICU4   <---------AtMYB61         --------- ----ANAC58       <-----------GT1                <---------ATHB12 --------->MYB59         -----------   tgtacttttttttttcaatttaagcttttctattctttgaagaaatgtgtaatcataaacataaaggtttggttatattcttgtgtttagaattgtgtaa  21922000                            <---------------AGL15                      <----------DOF2                 ---------->DOF2            --------->AHL20(2)            <---------AHL20(2)    --------->YAB1            --------->YAB1  <----------DOF2           <---------ATHB12 --------->TOE2(3)                              <-----------GT1       ----------------->AGL3  --------->YAB1               --------->AHL20(2) -->GT1------>ZmHOX2a(2)    --------------->AGL15         --------->AHL20(2)                    <---- >GT1  =====================================MADS_MADS     <---------AHL20(2)            --------->ZAT6   tatagttgatccaattatataaagcttttactttaataagaagtatgagtttaaaactaaaaaaatataaaaactttttactatttcttcacactaaatt  21922100                                              --------->ARR14(2)                                              <---------GLK1(2)                                              <---------ARR14(2)                                              --------->ARR11(3)                                              <---------ARR11(3)                                        ------>ZmHOX2a(2)                                       --------->GLK1(1)                                       <---------GLK1(1)                                       <------ZmHOX2a(2)                                      <---------ARR14(2)                                      --------->ARR14(2)               ------->TEIL           --------->ARR11(3)              <-----------GT1         <---------ARR11(3)                 <---------AHL20(2) <---------HSFB2a(2)                  <---------AGP1                    --------->AHL20(2) --------->HSFB2a(2)<----------DOF2  <---------CCA1(2)            --------->AtMYB61        <---------ANAC46 -------GT1--------------->AtSPL8<----------DOF2    <----------DOF2     <---------AHL20(2)---------->ID1   actctagaaaatttttgaacctctttgaaaaatcactttagatctccagattttcttttaaaaatccaccaaaattttttttttttttttttttcgttta  21922200  Previous    Next  AGI:  At3g59280.1    Description:  TXR1 (THAXTOMIN A RESISTANT 1). similar to signaling molecule-related [Arabidopsis thaliana] (TAIR:AT5G61880.2); similar to signaling molecule-related [Arabidopsis thaliana] (TAIR:AT5G61880.1); similar to unknown [Picea sitchensis] (GB:ABK21068.1); contains InterPro domain Protein Transporter, Pam16/TIM14 (InterPro:IPR015909); contains InterPro domain Protein Transporter, Pam16 (InterPro:IPR005341) Range:  from: 21919890    to: 21921699    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version