Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------>ZmHOX2a(2)                                    <---------At4g35610                            <----------DOF2                                             --------->ARR14(2)                            <---------DAG2                                              <---------ARR14(2)              <---------At4g35610  <---------AGP1          <------ZmHOX2a(2)        --------->YAB1  <              --------->LBD16      ------->TEIL<-----------HVH21           --------->MYB46(3)       -              --------->At4g35610  --------->ARR14(2)     --------->ARR11(3) --------->ANAC58     <--            --------->MYB46(3)     <---------ARR14(2)     <---------ARR11(3) --------->ANAC58 <------        <------ZmHOX2a(2) ---------->ID1    <---------ANAC55(2)         --------->REM1(1)     <------   gctggattggatcatccgctgaaaatttggccttatggatctgatcatgtgtcatttgaagatcaagacgagcttcaacaagcgaatcaaaattcgcttt  21918400                          --------->KAN4(2)                         <---------HSFB2a(1)                         <----------TaMYB80                         --------->KAN4(1)                         --------->HSFB2a(1)                         <---------KAN4(1)                 <---------TGA2(1)                 --------->TGA2(1)                 --------->bZIP60(1)      <-----------HVH21 ---------->TaMYB80 <---------GLK1(1)      <---------KAN4(2)                    <---------ALFIN1 ---------ARR11(3)      --------->ARR14(2)              --------->ANAC58 -------->ARR11(3)     <---------GLK1(2)                --------->ANAC46 -------TOE2(3)  <---------bZIP60(1)                    --------->ANAC58                        ----- ---DAG2  <---------At4g35610                  <------ZmHOX2a(1)             ---------->DOF2    ----- ----DOF2 --------->At4g35610                  <---------------AtSPL8<---------YAB1             -----   aagatacctgtcagcaatgacatcagaatattccaagtacaagagattaggagtacaaacgacacactcttgtgattctcaaagaacatttgattaaaac  21918500                                                                                     --------->ETT(2)                                                                                     <---------ETT(2)     --------->MYB52(2)                                                   <---------ATHB12   <---------MYB52(1)                                                  --------->MYB46(3)  --------->TOE2(3)          <-------TEIL                             --------->ANAC46  --------->TOE1(3)         --------->CCA1(2)                      <---------ZAT18 --------->ZAT14 ---->ANAC58     <---------ANAC58                         --------->TOE2(3) --------->WOX13(1) ---->ANAC58     <---------ANAC58                    ------>ZmHOX2a(1)--------->ANAC58 ---->ANAC46     <---------ANAC46                  ----------->RAV1(2)--------->ANAC58           <---   gaaacgttagtctcttgaggcttgtgctagatacagaacaagactcccaaaattcctgaaccatagtattgcacccatcaatcgctgtagacataggcca  21918600                                                                       <-----------RAV1(2)                                                                    ----------->HVH21            ----                                                                    <---------ATHB12         <-------                                                                <---------MYB55(2)          <--------                                                                --------->MYB46(3)      --------->TGA2(2)                                                               ------>MYB46(1)         <-----------TGA1                                                               ------>MYB83           --------->ANAC58                                 --------->CCA1(2)             --------->ANAC46       --------->ANAC58                              <---------YAB1                   -------->P             --------->ANAC46  ----------->RAV1(1)      <---------ARR11(3)   <---------ALFIN1<---------ATHB12      --------->bZIP60(2) ------ARR14(2)      <---------ZAT6  --------->ANAC46 <---------MYB46(3)  <------ZmHOX2a(1)--------->ICU4   atcccaacatgaagagatgtctagtgcaagttctgatacacgacgtttcaacacattggttatccaaccaatgacaggagcaggtccaacgtcatcttta  21918700                         --------->HSFC1(2)                         <---------HSFC1(2)                         --------->HSFB2a(1)                <---------DAG2                         <---------HSFB2a(1)                <----------DOF2                         --------->KAN4(1)               --------->ANAC46                         <---------KAN4(1)               --------->ANAC58                        <---------KAN4(2)                --------->ANAC58          <---------ARR14(2)                           <---------ALFIN1          --------->ARR14(2)                         <---------ALFIN1                      <---------ANAC58          --------->GLK1(2)                    <---------At5g28300                         <---------ANAC58 ----->ZAT6       ---------->DOF2   ---------->DOF2------>MYB46(1)                 <-----------GT1 ---DOF2  <-----------ARR10        --------->ANAC46------>MYB83       --------->TOE1(2) <----------DOF2 -ICU4   <---------GLK1(2)--------->KAN4(2)   <-----------GT1   <---------YAB1--------->GLK1(2)    <-   cacttgatggagaatctgttcaaaggaacattcttacacaaagccaatttaccatccacacgctttatgaaacgttggagcatcttaaccctttcttgtt  21918800   --------->ANAC58   --------->ANAC58                                               <---------ALFIN1 <-----------GT1                          <-------TEIL            --------------->AGL15 ----------HVH21              --------->YAB1   <----------DOF2 <-----------GT1               --------   ttgtcactccataatgcatacgcttagagtcatcaaaatcgagattcatctttttcaaatgcaaatcaccacttatagcctgaacagagcaaatgagctt  21918900                                                                                    <----------DOF2                                                                              ------------>CBF                                                                             --------->ANAC58                    --------->GLK1(1)                                        --------->ANAC46               --------->MYB52(1)               ---------->DOF2              --------->ANAC58          <----------ID1                ------------>CBF                 <-----------HVH21    --------->AHL20(2)             <---------ICU4                       <----------DOF2    <--------- ->At4g35610  ---------->DOF2    ----------->RAV1(1)           <---------ARR11(3)--------->GLK1(2)   aagtaagaaaatacaacaaagggattccaaaaatacaacattaccaatttcaaagccggtttcaaggtctaagcctttcacacaatctttaagtttccat  21919000                ----------->GT1            ---------->DOF2    --------->TOE2(3)                                    --------->ANAC58  --------->GLK1(2)                               ------->GAMYB <---------GLK1(2)    <------------CBF--------->YAB1     --------->ANAC58 --GT1 --------->MYB52(1)--------->YAB1     --------->TOE2(3)          <----------DOF2   ttagattcttaacagaaagagaaatattgataactaagaatcaaaacatcaacacacataggcaaatgttcttcttttcgaaagtttttaaactagagac  21919100                                          <---------YAB1                               ----------->HVH21                             --------->ALFIN1                           <---------ANAC58                           <---------ANAC58                           <---------ANAC46<---------ICU4                      <---------ANAC58    --------->ICU4                      <---------ANAC58    <------ZmHOX2a(2)                             <---------ARR14(2)                 --------->At4g35610     <---------ARR11(3)                           --------->LBD16                 --------->HSFC1(2)      --------->ARR11(3)                         <---------LBD16                 <---------HSFC1(2)     --------->GLK1(1)                    ---------->DOF2                --------->GLK1(2)  <---------At4g35610                   <----------DOF2--------->ARR14(2)            <------ZmHOX2a(1)<---------ANAC46<---------YAB1            ------->TEIL--------->MYB52(1)            =====================================HOX2a_HOX2a       --------------->AtSPL8   actacttgagaagaggagaagcttacttggggtgtgaagcagagatcattatacaactgttgagttttcaatgtactttcaaagaaaccggattcagagg  21919200                                                                           --------->MYB52(2)                                                                           --------->MYB59                                                                         <--------P                                                                       ----------->GT1                                                                    --------->ALFIN1                                                                  <------NtERF2                                                                <---------ANAC46                  ---------->DOF2                               <---------ANAC58               <-----              <---------ANAC46              <------------AtMYB77<---------ANAC58            <--------            <---------ZAT14     <---------TOE2(3)              <<<<<<<<<E2Fd             <---------GLK1(2)            --------->ZAT14     <---------TOE1(3)              <---------LBD16     <-----------RAV1(1)       ---------->DOF2 <---------REM1(1)    --------->ZAT6     <<<<<<<<<E2Fc  >>>>>>>>>>>>>>>>>LFY   ttttatagccaaagtgaagtgaaagttgtagattagggttttggtaactgtagcccttgtaatttggcgggaggggttagttccaatgttggattttctt  21919300  Previous    Next  AGI:  At3g59270.1    Description:  syntaxin-related family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G58310.1); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21917570    to: 21918849    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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