Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->AHL20(2)            <---------SPL7                                <---------YAB1                            <           --------->TOE1(1)                          <---------DAG2                                <           <---------ANAC46                       <-----------GT1                                   -           --------->TOE2(1)                   <---------ICU4 <---------AHL20(2)                   --        --------->bZIP60(1)         <-----------GT1   <----------DOF2 ----------->RAV1(1)     <------        <---------O2               --------->AHL20(1)--------------->AGL15                  ---------        --------->O2               <---------ARR11(3)================================================        <---------bZIP60(1)   ------------>CBF --------->ATHB51 <------------CBF           <---------YAB1   cttccaaacgacgtcgtacaaaatgctattcaaacaatatactagtccataatttcctttttgataaattggcaacattcaaaaattagatttatgataa  21914400                            <---------TOE2(3)                      --------------->AGL15                      =========================================================MADS_MADS                      <---------------AGL15                                      <---------ANAC58                     ----------------->AGL2                                   <-----------GT1                     <-----------------AGL1                               <---------ARR11(3)                     <-----------------AG                                 <---------AHL20(1)                     <-----------------AGL3                        <------------CBF                     =========================================================MADS_MADS                     ----------------->AGL3                    ------>ZmHOX2a(1) <---------ANAC58                     <-----------------AGL2                    --------------->AGL15                     =========================================================MADS_MADS ------MYB46(1)      ----------------->AGL1                    <---------------AGL15 ------MYB83       --------->MYB52(1)                         --------->TOE2(3) ----------------->AGL1 ---------->GT1   <---------MYB55(2)                          --------------->AGL15<---------MYB52(1) ------->MYB59    --------->MYB46(3)                          <-----------------AGL3 ---YAB1        --------->ANAC46      <---------GLK1(2)       ----------------->AGL2 >YAB1   --------->ANAC46<---------ATHB51----------->GT1      <-----------------AGL2  <---------AtMYB61 ======================================MADS_MADS      ------------>CBF    --------->ARR11(3)   tttggtaacatgcgctacaaacaaccgattatggaaactagaatcgtataaactaattcaatttcctaaaattggatatatttccgttttggtgaccaaa  21914500                        <---------MYB52(1)            <---------ICU4                      <---------ANAC58             <--------HAHB4                   <-----------GT1                 --------->ATHB51               --------->AHL20(1)                 <---------YAB1               <---------AHL20(1)                 --------->ICU4                                <----               --------->ARR11(3)          <---------ANAC46     --------->AtMYB61          --------->DAG2               <---------ARR11(3)          <---------AtLEC2   ------>MYB83            <---------YAB1              --------->CCA1(2)            <---------ANAC58  --------->ORA47(1)      --------->AHL20(2)             <---------ARR11(3)   ---------->ID1--------->YAB1------>MYB46(1)    <---------AtLEC2 ---             --------->ARR11(3)   <---------TOE2(3)<---------ICU4       <---------ALFIN1  ---------->DOF2      ---------->DOF2 <---------ANAC58     <---------ANAC58--------->DEAR3(2)<----------DOF2    <----   aaaaaaaaaaaagaagatatatttccgtttttgtttgtggtttttgcttgtcataattaagaccgaccatacctcgaccctttgcattaatataaagggc  21914600                           <-----------GT1                    ------------>CBF     <---------AHL20(2)  <---------ARR11(3)      --------->At4g35610                               --  --------->YAB1  --------->ANAC58         ---------->DOF2                                       <--- <---------YAB1   --------->ANAC58    <---------------AGL15                                     ----- -----ANAC58    <---------ANAC58      --------------->AGL15                                     <---- -------->GT1   <---------ANAC58     ----------------->AGL3                  <---------YAB1  -------- -----ANAC58    <---------AtLEC2 <---------ARR11(3)                 <----------DOF2          <-------   ttgataataaatctgtatgcatgccaatatcacattatctccattaaaagcagcactaaacgttctctctcttttttttgttattagttttgaactgcag  21914700                           ------------>CBF                      --------->AHL20(2)                      ----------->TBP                      <---------AHL20(2)                    --------->AHL20(2)                    ----------->TBP                    <---------AHL20(2)                           --------->CCA1(2)              --------->CCA1(2)                                 <---------ARR11(3) ------->MYB52(1) <---------AHL20(2)                      <------ZmHOX2a(2)              ---------->DOF2 ------MYB52(2)   ----------->TBP                         <---------YAB1  --------->HSFB2a(2) ------- ---->At4g35610   --------->AHL20(2)                     --------->ARR11(3)     ----------->GT1 -----At4g35610 ----------->TBP                          <---------ARR11(3)  ---------->DOF2 <------- ->ZAT14     --------->ARR11(3)                         --------->GLK1(1) <---------HSFB2a(2)-------- --ZAT14     <---------ARR11(3)               --------->YAB1    --------->ARR11(3)    --------->AHL20(2)   cgaacagagaccgaagatatatatatatatacaataaacagagttttatcaaaatcagagatcatagatatgttatcgagaaaggtcattaaaaagatat  21914800   --------->ARR11(3)   <---------ARR14(2)   --------->ARR14(2)              --------->MYB59   <---------GLK1(2)           <---------MYB46(3)  --------->ANAC58   <---------ARR11(3) <---------TOE2(3) --------->ANAC58                 <----------DOF2 -->CCA1(2)           <---------YAB1    --------->ANAC58         <----------DOF2          <------ZmHOX2a(1) --ARR11(3)     <---------TOE2(3)  --------->MYB46(2)     <------------------------ANAC81----------->GT1 ->ARR11(3)     <---------TOE1(3)<---------MYB52(1)--------->ANAC58   <-----------GT1  <---------LBD16   atgcagattttgagaatgaaggttatggtactgtcgttaggcaaggcatcaccaagtaagttttcttctttttttctttctcaattttctcaggaaaaat  21914900                                         <--------P                                                 -                                        <-------GAMYB                                              --                                       ----------->GT1                                             --                                <---------ANAC58                --------->ATHB12                  <--    <---------bZIP60(1) <---------AHL20(2)           ----------->HVH21                --------->MYB52(2)    --------->bZIP60(1) --------->AHL20(2)     <-----------RAV1(2)          --------->SPL7        --- <---------ATHB12  <-------TEIL <---------ANAC58  <------ZmHOX2a(1)        <---------MYB52(1)    <---   ccaatgacttcaccttcaagtttcatataatttttcttgtggggttacttcaggagtgaccatgagttattggacccgttcgtctcgctagttgaatttt  21915000             --------->LBD16            --------->ANAC55(2)            --------->HSFB2a(2)            <---------HSFB2a(2)                                           --------->ATHB12           <---------LBD16     --------->AHL20(1)                         <---------ICU4           ----------------->AGL1                                         --------->ATHB51     <---------AHL20(1)        --------->ARR11(3) <---------ANAC58        -------->ATHB1     <---------AHL20(2)        <---------AHL20(1) <---------ANAC46       --------->ICU4     --------->AHL20(1)    <---------AHL20(2)<---------ICU4              <---------AHL20(2) -------->At5g28300       <---------AHL20(2)--------->ICU4       --------->At4g35610 ------->LBD16            --------->AHL20(2)<---------YAB1      --------->ANAC46                  === --------->GT1<---------MYB52(1)          --------->YAB1   --------->GLK1(2)                    ----- -------HSFB2a(2)  ----------->GT1       <---------YAB1    <-----------ARR10       <-----------GT1--- ------>HSFB2a(2)----------->GT1   <---------YAB1 <---------ANAC58       --------->AHL20(2)  <------- ------LBD16--------->ANAC46  <---------AHL20(2)<---------AHL20(2)       <---------ATHB51  <---------   ccggtaaaatatttccggaatgtgtaaattaaatattttgattttgataattacttgggataatctaagcagcaaattattgttttttcagtttcacctc  21915100             =============HOX2a_HOX2a             <------ZmHOX2a(2)            <---------ARR11(3)           --------->YAB1                                              --------------->AGL15    <---------ARR14(2)                                             <---------GLK1(1)    >>>>>>>>>GATA-2                                              --------->YAB1    >>>>>>>>>GATA-1                                              <---------ICU4    >>>>>>>>>GATA-3                                              <--------ATHB1    >>>>>>>>>GATA-4                                              --------->ATHB12 ===================HOX2a_HOX2a                                 <---------ATHB12 ------>RAV1(2)                     <---------ANAC55(2)         <---------YAB1              <-------- --->ZmHOX2a(1)    ------>ZmHOX2a(1)--------->ANAC55(2)         --------->ICU4         <---------At4g35610 --At4g35610--------->ARR11(3)    <-----------GT1         <---------ETT(2)         --------->ICU4 --GT1  ---------->DOF2        <---------CCA1(2)          --------->ZAT18  <---------MYB52(1)  ------   ctggtggattcaaagatcatcctcacagaggtcgtatcacctattcattctttcttcatgtccacaatgatttctctgttttgtaatgcttctgatgtag  21915200                                            <---------At4g35610                                            --------->ZAT2                                            <---------ZAT2                              <----------DOF2                                           --------->LBD16                       --------->YAB1                      ---------->DOF2     <---------HSFB2a(2)                   <---------ATHB12    <          --------->REM1(2)       <-------TEIL                      --------->ATHB12  <---------At4g35610 -REM1(1) --------->ZAT14 ----------->GT1 --------->HSFB2a(2)      <---------YAB1<---------ICU4     < ----->GT1<---------ZAT14 <---------ZAT6  <-----------RAV1(2)      <---------ATHB12   --------->At4g35610   ttaaatcaactgtgtacaggttttgaaagtgttacatacatgttccaggtgagaaacaagtcttcatccatgattcgagtcaataatcagcttttggttt  21915300  Previous    Next  AGI:  At3g59260.1    Description:  pirin, putative. Identical to Putative pirin-like protein At3g59260 [Arabidopsis Thaliana] (GB:Q9LX45); similar to PRN (PIRIN), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G59220.1); similar to unknown [Populus trichocarpa] (GB:ABK95380.1); contains InterPro domain Pirin (InterPro:IPR012093); contains InterPro domain Pirin, C-terminal (InterPro:IPR008778); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain Pirin, N-terminal (InterPro:IPR003829) Range:  from: 21914816    to: 21916165    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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