Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------------AtSPL8                                                                                 --------------->AtSPL8                                                                               <--------ATHB1             --------->HSFB2a(2)                                               --------->YAB1             <---------HSFB2a(2)                                               <------------ATHB5         --------->DEAR3(1)                                                    <---------ICU4       <---------At5g28300                                                    --------->ICU4      <-----------GT1                                                         <---------ATHB12   --------->YAB1                  <------ZmHOX2a(2)            <---------ARR11(3) --------->ANAC58     ------>MYB46(1)             <----------DOF2         <---------ATHB12 --------->ANAC58     ------>MYB83--------->ARR11(3)            --------->ARR11(3)         <---------   ggcaagtatcaccgtctcgaaaccaaatactactaagatcgagagtcttaagctttggaagaaaaacatcttccaaatcaatgatggtacaattttcagt  21910900                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                                                                                         <---------GLK1(2)                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                     <---------ANAC58                                                --------->CCA1(2)                <---------ANAC55(2)                                                 <---------ARR14(2)                --------->ANAC55(2)                                                 --------->AGP1<--        --------->ZAT2                                                              --------->ARR11(3)        <---------ZAT2                                                              <---------ARR11(3)        <---------At4g35610                                                    <---------ATHB12<----- --------->ARR14(2)  <---------ANAC58                                   ------>NtERF2--------->ARR14(1) <---------ARR14(2)  <---------ANAC46                               <-----------GT1 --------->ARR14(2) --GT1  --------->At4g35610   ---------->DOF2        --------->ATHB12<---------At5g28300 <---------MYB52(1)   tcgtattctcagcttaacaagtgacttgctcacaaagacacttgaaggcatagaacgatttgaaacaaaattaccgcctaaatcaagatccgatactcca  21911000                                                                       ------>MYB46(1)                                                                       --------->MYB52(1)                                                                       ------>MYB83                                                                     <---------MYB59                                                                     <---------MYB111(1)     --------->YAB1                                         <---------ANAC58 ---->MYC2                                                  <---------ANAC46 -----MYC3                                                  <---------ANAC58 ---->MYC3                                                --------->ZAT14 >ANAC58                                                  <---------ZAT14                       ----- >ANAC46                     <-------TEIL               <---------At4g35610           <---------At5g28300 >ANAC58               ---------->DOF2             --------->ETT(2)--------->GLK1(2) <-----------GT1- -----MYC2    <---------GLK1(1)        <------ZmHOX2a(2)--------->At4g35610  <---------ANAC46   ----- ----ALFIN1   --------->GLK1(1)    <---------HSFB2a(2)  <-------GAMYB<---------MYB46(2)   --------->AtLEC2   cgttctatcacatttgatatccatctaaagatgcattctcgatcaataccatttcgacagttgagtgagaacctaactagagtggaattaccctgcaaac  21911100               --------->GLK1(1)                                                      <---------ATHB12            --------->ANAC46       ------->TEIL                               --------->YAB1           --------->LBD16<----------DOF2    --------->AtLEC2                <---------ATHB12 ---->ANAC58--------->ANAC58      <-----------GT1           <----------DOF2 <---------ARR11(1) -------->ARR14(2)      ------->TEIL --------->TOE2(3)    ------->TEIL     <---------ARR14(1) ---->ANAC58--------->ANAC58   --------------->AtSPL8--------->MYB52(1)  <---------MYB59   ccaatactctatccacgaaatccatgaactttctatgaacctcattcatgtaaaccaatggactttgcatccataccgaatcatcgaaatcaagaattgg  21911200                --------->ANAC58                         <-----------RAV1(1)                --------->ANAC46                      <----------DOF2              --------->MYB52(1)                  <---------GLK1(2)                                <-              <---------DOF5.7(2)                <---------At4g35610                            -----      ---------->DOF2                            --------->At4g35610                         --------   --------->ANAC58                              --------->HSFC1(2)             ----------->GT1 <----   --------->ANAC58      <---------LBD16   ---------->DOF2        --------->TOE1(2)       <---------ARR11(3) ---------->DOF2--------->ANAC58<---------ZAT14  <---------HSFC1(2)   <------ZmHOX2a(1)   --------->ARR11(3)   tgcaaaagcaaagagataacgccatttttcggagagaagtgatgttaaagcagcttcttttgtgggaacgaaggacagtaagtggcaaataagagcttct  21911300                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                              --------->GLK1(1)              --------->ARR11(3)                             <---------ARR14(2)              <---------ARR11(3)                             <---------ARR11(3)     <---------At4g35610                                     --------->ARR11(3)    ------>ZmHOX2a(2)                                        <---------AGP1 -------P    <---------CCA1(2)                               --------->ARR14(2)                 ----- ---->HSFB2a(2)                                      <---------ICU4                             <---- ->GLK1(2) --------->AHL20(2)          <----------DOF2 ----------->HVH21             --------->AHL20(2) -----HSFB2a(2)       ----------->RAV1(1)         --------->YAB1              ------->TEIL<----------   ggtagatcgctgattatatctttgcaacatatatcatccatctttgttgaattcatagtgacagatctcaaacagttacgaacctgataaaataacatga  21911400                                                            <---------ATHB12                                                    --------->ANAC55(2)                                                    <---------ANAC55(2)                         <----                                                    <---------ANAC55(1)                   <---------ICU4                                       <---------------AtSPL8                            --------->ICU4                                    <---------WRKY18(1)<-------TEIL                 ----------->GT1                                 <---------ANAC58   <---------ANAC46              ---------->DOF2                              <---------GLK1(2)     <---------ANAC58            --------->MYB46(3)     <---------ZAT14         --------->At4g35610    <---------ANAC58           ------>MYB46(1)  ----- ---->ARR11(3)               <---------At4g35610   --------------->AtSPL8      ------>MYB83     <---- -----ARR11(3)    ---------->DOF2<---------ANAC58  --------------->AtSPL3     ----------->RAV1(1) -GT1--------->ZAT18       <-----------RAV1(2)     <---------------AtSPL8   --------->MYB46(3)  -----   tatcgagtaaactattagattaaagagtttcagatgcttgactagtacaaaattacgtacaaatcaaacagaaacaaaaccaacaaaagtaaaaatttct  21911500                                                                        --------->YAB1        <---------AHL20(2)                                     --------->O2        --------->AHL20(2)                       --------->DAG2<---------TGA1a        <---------AHL20(1)                      =========================bZIP_DOF       --------->AHL20(2)              --------->YAB1          <---------O2     --------->TOE2(3)      --------->YAB1      ---------->DOF2--------->TGA1a -----HSFB2a(2)         <------ZmHOX2a(1)--------->At4g35610<---------ZAT18 ---->HSFC1(1)        <---------TOE2(3)<---------ICU4       --------->ZAT18                         < -----HSFC1(1)       --------->YAB1   --------->ICU4      --------->At4g35610                <------- ---->HSFB2a(2) ------------>CBF    --------->YAB1        <---------At4g35610                --------   agacaaacattaaatttggacaataaggaatcacaaaataatcatcagaaaaaagcgggaagctcacttgggaattagaacagagggcatcaaaattaaa  21911600        <---------ANAC58        <---------ANAC46        <---------ANAC58                                                                            <     <---------WOX13(1)                                                                        <-----    <---------ANAC58                   <---------ARR14(2)                                      ------    <---------ANAC58                   --------->ARR14(2)                                     <------    <------------CBF               <---------TOE2(3)                                          -------   --------->ATHB12       ----------->GT1                                                 --------->ZAT18 <---------WOX13(1)       --------->YAB1          ------>ZmHOX2a(1)                       <---------ZAT14 ------------CBF   --------->At4g35610<---------GLK1(1)                                 --------->ZAT18 --AHL20(2)      <---------DEAR3(1)<---------TOE1(3)              <---------MYB52(1)    <---------ZAT18 ->AHL20(2) --------->ALFIN1 <---------AHL20(2) ----------->RAV1(2)                    <---------ANAC46   aagattgattgcgagaggggcagtggaatagtaaattagggtttctgcaatcctggtccaaaaattcagttttgtttttcgaacttatagtgtgcaatga  21911700                                                              ------->TEIL                                                              --------->ARR14(2)                    -                                              <-----------HVH21                                    --                                             <---------bZIP60(1)  ------>ZmHOX2a(1)                <- <------ZmHOX2a(1)                           --------->bZIP60(1) --------->TOE2(3)                 -- ----------ID1                             --------->YAB1     <---------ARR14(2)                <---- ----ICU4                                 <---------YAB1     <---------CCA1(2)        ------>ZmHOX2a(1) --->YAB1                              --------->ICU4    <---------ANAC46  <---------At5g28300  ----- ---ATHB12                             <---------YAB1   <---------DEAR3(1)<-----------GT1 <----------DOF2 -->ICU4               <---------TOE1(2)--------->YAB1 <---------------------WRI1 <-----------GT1  <-   tgaggacgaatcagagaagttttcgagggttttcacatgtgattatcatgtcacttgctcggtgtatcctaagttgttactgtttatcctctctttaaaa  21911800  Previous    Next  AGI:  At3g59240.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At3g59240 [Arabidopsis Thaliana] (GB:Q9LX47); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21909659    to: 21911341    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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