Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ARR14(2)                         <---------ARR11(3)                         --------->GLK1(2)                         <-----------ARR10                         --------->ARR14(2)                <---------YAB1               --------->AHL20(1)               <---------AHL20(2)              <---------ICU4              --------->ATHB51              <---------AHL20(2)              --------->AHL20(2)             --------->ICU4             <---------YAB1                                                   --------->AHL20(2)          <---------AHL20(2)                                           <---------ZAT6          --------->AHL20(2)            <---------YAB1               <---------ANAC58          <---------YAB1 --------->ARR11(3)                          <---------ANAC46         --------->AHL20(1)    <---------ANAC58                      <---------ANAC58         <---------AHL20(1)    <---------ANAC46                      <---------ANAC55(1)         --------->AHL20(2)    <---------ANAC58               --------->AHL20(2)        --------->YAB1  <---------CCA1(2)                     <---------AHL20(2)                   <- ------DOF2--------->YAB1<---------ARR11(1)--------->AtLEC2 <----------DOF2  <---------WOX13(1)------   attgtgccaaatataattattttggcaaatcttgcgtttattttcattcaaatttggaaactctttaaatttcgtgttaattgaatatcgaggggaatcg  21904700                                                                                    --------->GLK1(1)                                                                                    <---------GLK1(1)                                                                                   <---------ARR11(3)                                                                                   --------->GLK1(2)                                                           <----------DOF2         <---------ARR14(2)                                                           =======================bZIP_DOF                                                        ===================================HOX2a_HOX2a                                                        ------>ZmHOX2a(1)          --------->ARR14(2)                                                  ------->MYC3             <-----------HVH21                                                  <-------MYC3            --------->ALFIN1                                                  ------->PIF5            ----------->HVH21                                                  <-------PIF5           ------->MYC4                                                  ------->MYC2           <-------MYC2                                                  <XXXXXXXXXXXXXXXXXXXXMIR164C     <---------ARR14(3)                                                  ------->MYC4           ------->PIF5                                                  <-------MYC4           -------->ABF1                                                 --------->O2            <-------MYC3                                                 <---------TGA1a         ------->MYC3                                                 --------->ANAC55(2)     <-------PIF5                                                 <XXXXXXXXXXXXXXXXXXXXMIR164A/B<------NtERF2                                                 --------->ANAC46        ------->MYC2------>ZmHOX2a(2)                                                 =====================bZIP_DOF <---------At4g35610                                                 --------->TGA1a         <-------MYC4================                                                 <---------O2           --------->TGA1a                                               <---------ALFIN1         --------->O2=================                                              <---------WRKY12  --------->ANAC58   <---------AGP1   -                                              <---------WRKY38(1)       <---------O2<------ZmHOX2a(2)                                              <---------WRKY45  --------->ANAC46   --------->ARR11(3)                                             <-----------------PIF3(1)  --------->ANAC46            -                                       ------->TEIL     ====================================HOX2a_HOX2a        <-----------GT1              --------->ZAT18  <---------ANAC58  <---------TGA1a         ----- --------CCA1(2)                --------->AHL20(2)<-------MYC2  --------->ANAC58  <------ZmHOX2a(1) - ----->GT1         --------->ZAT6    <---------ZAT18  <---------ANAC58  --------->ANAC55(2)   <------   tatatcaaattcacatgtctaagactattcacacttaaatgcacttggtccacgtgtcctgcttctacgcatacacgtggcagaggatctcttatggtgt  21904800       --------->KAN4(2)      <---------KAN4(1)      --------->KAN4(1)      <---------ICU4     --------->ICU4     <---------YAB1                  --------->MYB52(1)     <---------KAN4(2)            --------->ANAC58                            <---------ARR14(2) ==================HOX2a_HOX2a    --------->ANAC55(1)                         --------->ARR14(2) ==================HOX2a_HOX2a    --------->ANAC58                         --------->ANAC55(2) -------->ANAC58                  --------->ANAC46                  <-----------GT1 -------->ANAC46            --------->AHL20(2)                      ---------->ID1 ------>HVH21<---------TOE1(2)    --------->ANAC55(2)           ------>ZmHOX2a(1) -------->ANAC58        <---------TOE2(3)                       <----------DOF2  --------->YAB1 ---ANAC46  ------>ZmHOX2a(1)     <---------ANAC55(2)   --------->YAB1   --------->MYB52(1)       <--   gaacgcgattattcctatgtgtctctaagattaaacaagtaatggaaattttgagcattcgtaatcctttttccctaacgtattcgtaatctaatcggct  21904900                                                               <---------ZAT18                                                            <------MYB46(1)                                                            <------MYB83                                                           <---------AtMYB61                                                           <---------MYB46(3)                                                  <--------HAHB4                                       --------->AHL20(2) <---------MYB52(1)                                      <---------ATHB12    <--------P                                    --------->WOX13(1)    <---------MYB55(1)                                   --------->AHL20(2)    <-------GAMYB                               <---------AHL20(2) <---------ICU4                              --------->AHL20(2)  <--------ATHB1                           --------->AHL20(2)     --------->YAB1                     --------->ARR14(2)--------->ATHB51<---------YAB1            ------>MYB83  ------                     <---------ARR14(2)-------->ATHB1  <---------TOE2(3)         ------>MYB46(1)                     --------->GLK1(2)<---------ATHB51<---------At5g28300       <---------ALFIN1-----           <---------ARR14(2) <---------AHL20(1)  --------->ATHB51--------->ANAC58             ------           --------->ARR14(2) <---------AHL20(2) --------->ICU4<---------WRKY38(1)             ------    --------->WOX13(1)  --------->TOE2(3)        <---------ATHB51 --------->ANAC58      <-----------HVH21 ------->TEIL       <---------GLK1(2) --------->ICU4 <-----------GT1           --------->MYB46(3) -------YAB1  <-----------GT1 --------->AHL20(1) <---------ATHB12 --------->ANAC46<---------ALFIN1   atgaatcaatccatattcaccagaatccataatataatcaattattcagcaataattacggttggtccacacaaatatagacccactcaccttcacctac  21905000                                                                --------->ANAC46                                                                ============================bZIP_DOF                                                                --------->ANAC58                                                                --------->ANAC55(1)                                                                --------->ANAC58                                                                --------->bZIP60(2)                                                                --------->O2                                                                --------->TGA1a                                 <----------DOF2            --------->ANAC46                         --------->At4g35610   ----------->TBP<---------ALFIN1 -->P                    <---------At4g35610 --------------->AGL15 ---->REM1(1)            <---------GLK1(1)   <---------------AGL15               ---------->DOF2 >MYB83                 ------->TEIL        ----------------->AGL3   <---------MYB52(2) >MYB46(1)  ------------>CBF     =========================================bZIP_DOF--------->ANAC46   aacttccagttgcagtcaatactctgcatctccctctttctctctcgctatatatagtttacacacacgccactacccaaatacaaagcactgacttctt  21905100                                                                                   <---------SPL7                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC46                                                                          <---------ICU4                                                  <---------ICU4          --------->YAB1                                                  --------->YAB1       --------->YAB1                                                 <---------YAB1       <---------YAB1                                               <---------ICU4       --------->YAB1<---------ANAC58                                               --------->YAB1    --------->YAB1   <---------ANAC55(2)                                            XXXXXXXXXXXXXXXXXXXX>MIR414<---------ICU4                                            <---------ICU4       <---------ICU4 <---------TGA2(2)                                            --------->YAB1      <---------YAB1 ----------->TGA1                                           <---------YAB1     --------->YAB1 --------->YAB1                                         <---------ICU4       <---------ICU4 <---------ICU4        --                                         --------->YAB1      --------->ICU4 <---------YAB1         <-           *TSS        --------->YAB1   <---------YAB1   <-----------TGA1<---------YAB1            --         <----------DOF2     --------->AtMYB61<---------YAB1 <---------YAB1 --------->ICU4       <---      --------->ANAC58 <---------ICU4 <---------ICU4 <---------ICU4 <---------ICU4<---------ANAC55(1)      --------->ANAC58<---------YAB1  --------->YAB1<---------YAB1 <---------YAB1 <---------ANAC58 <-   ccattaacaagcttttcttcgtttatcatcaccatcaccatcatcatcatcatcatcatcgtcatcatcatcatcatcatcatgacgtatgagaacaata  21905200                           --------->HSFB2a(2)                           <---------HSFB2a(2)                      --------->HSFC1(2)                      --------->HSFB2a(1)                      <---------HSFC1(2)          --------->YAB1   >>>>>>>ZML2                  --------->At4g35610   --------------->AGL15--------->ARR11(3)              <---------At4g35610 ------->ZAT14        <---------HSFB2a(1)               --------->ZAT2 --------ZAT18    --------->ANAC58                    <------ZmHOX2a(1) ------->ZAT18    --------->ANAC58               --------->ALFIN1        <---------bZIP60(1) ------------AtSPL8 ---------->DOF2            <------MYB46(1)           --------->bZIP60(1) --------ZAT14 <---------ATHB12---------->DOF2 <------MYB83  <---------MYB46(3)---------->DOF2  <<<<<   gtgtaccaagaattgtaatcaagaaagttctagcaaagcttgagaaggaaggtgaaggagctgtcgttagaaatggcatcacaaagtgagttctcttctt  21905300                                                         <----------DOF2                                                       ---------->ID1                                                 <---------AHL20(2)                     --------->ATHB12                                               <---------AHL20(2)                      --------->ARR11(3)          --------->ANAC58                   <---------AHL20(2)               <---------WRKY18(1)        ---------->DOF2                    <---------CCA1(2)     <--------P <---------WOX13(1) <----------DOF2                        <-------TEIL  <-----------GT1     <------ZmHOX2a(1) <<<<TBF1 --------->ANAC58  <---------ALFIN1<---------AHL20(1)  <-------GAMYB--------->WRKY38(1)   <-   cttctttctcaaaagcaaaatccaatgccttcaccttcaagtttcatatatttttttttctttttgggttgattcaggattgaccagaagttattggacc  21905400                                                        --------->AHL20(2)                                                        --------->YAB1                                                     --------->WOX13(1)                                                  <-----------HVH21                                              ------->TEIL                                              --------->GLK1(2)                                ------                                              <---------ARR11(1)                               <-----                                              --------->ARR14(2)        <---------AHL20(2)     <-----                                              <---------ARR14(2)        --------->AHL20(2)    <------        <---------ANAC58                     <---------CCA1(2)        <----------DOF2         -------        <---------ANAC58                     <---------ARR14(1)  <---------MYB46(3)         <--------   <-----------RAV1(1)                       <---------GLK1(2)  --------->ALFIN1           --------->ICU4 <---------ANAC58                          --------->LBD16    --------->ALFIN1           --------->YAB1 <---------ANAC58                         --------->LBD16 ---------->DOF2           <---------AtLEC2 --------MYB52(1)      ------>ZmHOX2a(1) <---------LBD16<---------AHL20(2)    <---------YAB1---------   cgttcgtgttgctagttgaattttcctgtaagtttcttccttcccccgaatctgtcaattaaaagtgtggttcttttattatgttagcatgtcataatca  21905500                                          --------->ARR11(3)                                          <---------ARR11(3)                                          --------->ARR14(2)                                      <---------LBD16                                   --------->GLK1(1)                                   <---------GLK1(1)                                  <---------GLK1(2)                                  --------->ARR14(2) --->ATHB12                       <---------ARR14(2) ---HAHB4                    <---------At4g35610                                                 ---- ----ICU4                    <---------ZAT2=============HOX2a_HOX2a                              <--- ---YAB1 <-------GAMYB       --------->ZAT2<------ZmHOX2a(2)                         --------->ANAC58 -->ICU4<---------MYB46(3)   ----------->RAV1(2)                                     --------->ANAC46 -ICU4  --------->MYB52(2)   --------->At4g35610                                     --------->ANAC58 >YAB1<---------MYB52(1)   <-----------RAV1(2)   ------>ZmHOX2a(1)                 --------->ANAC46   tttgctctgtttgttgatcagtttcactctcagctggattcccagatcatcctcacagaggtcaatttcacatataccttcttacacacgaagttgctct  21905600  Previous    Next  AGI:  At3g59220.1    Description:  PRN (PIRIN); calmodulin binding. Identical to Pirin-1 (PRN1) [Arabidopsis Thaliana] (GB:Q9LX49); similar to pirin, putative [Arabidopsis thaliana] (TAIR:AT2G43120.1); similar to unknown [Populus trichocarpa] (GB:ABK95380.1); contains InterPro domain Pirin (InterPro:IPR012093); contains InterPro domain Pirin, C-terminal (InterPro:IPR008778); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain Pirin, N-terminal (InterPro:IPR003829) Range:  from: 21905111    to: 21906600    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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