Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------AHL20(2)                                           <---------YAB1                                         <---------AHL20(2)  <---------AHL20(1)                                        --------->AHL20(2)   <---------AHL20(2)                 -----                                        <---------AHL20(2)   --------->AHL20(2)                <-----           <---------------AGL15     --------->AHL20(2)      --------->AHL20(1)              --------       <-----------GT1               <---------AHL20(2)     <---------AHL20(2)              <-------- ---------YAB1  ---------->DOF2     --------->AHL20(2)      --------->AHL20(2)        --------->ZAT18   ttaaaattgttaccccaaaaaagagagttgtatttcgatttatttattattttcagttacaaataaattgaaacgatttgcagcaatttgcactattatc  21883300                                                                <---------ANAC58                                                                <---------ANAC58                                                            <----------DOF2                                                          ------->TEIL                        --------->SPL7                  --------->ZAT18                       ------>NtERF2                    <---------ZAT18                      ----------->HVH21               <---------------AtSPL8     ----------->GT1  <---------SPL7               ---------->DOF2 ---->YAB1          --------->At4g35610          --------->ANAC58         --------->ANAC58 ----YAB1           <---------At4g35610          --------->ANAC58<----------DOF2 <----------ID1 ->YAB1        --------->DAG2            <---------DAG2 <---------ZAT14   --------->ANAC46 -YAB1        ---------->DOF2            <----------DOF2--------->ZAT14   --------->ANAC58         --   acaagaatggaaacaaaaaagcagcggacgagatggttttgagcttttcccaagaaagtgtactttgctttcgactacgcaaaatgacaaatttctggtt  21883400                                                                   <-----------TGA1                                                                   <-----------HVH21                                                                  <---------O2                                                                  =================bZIP_DOF                                                                  --------->O2                                                                  --------->bZIP60(1)                                                                  --------->ANAC58                                                                  --------->bZIP60(2)                                                                  --------->ANAC58                                                                  <---------bZIP60(1)                                                                  --------->TGA1a                                                                  --------->ANAC46                                                                 <-----------STF1                                                                 --------->SPL7                                                                 <---------TOE1(2)              -----                                                       <-----------TGA1                     <--------                                                       <-----------HVH21    <-----------GT1<---------                       ----------->GT1        ==============================bZIP_DOF  <---------YAB1<                     ---------->DOF2          <----------DOF2   ------>ZmHOX2a(1)   <--------HAHB4 <-                 ---------->DOF2        <---------MYB46(3)     --------->TOE2(2)   <---------YAB1 <--               --------->AHL20(2) <----------DOF2 <---------At5g28300   <----------DOF2--------->AHL20(2) ------->ZAT6  <---------AHL20(2) ==========================================bZIP_DOF--------->YAB1---   accactacttgaagaaattaaaagaaagtaaaatttctttggctgtttcttttacagcgtcatttcctacgtcacttttgactctattattatttatcct  21883500                                          <----------DOF2 ->ZmHOX2a(1)                        <---------ANAC58 ---GT1                          <---------ANAC58   <---------YAB1 --GT1 <------ZmHOX2a(1)         <---------ANAC58<----------DOF2 ----------DOF2              <----------DOF2    <---------DAG2 --------------AGL15   <----------DOF2<---------ZAT18                                       <-------- ---------------AGL1 ---------->ID1  <---------ANAC46                                ---------->DOF2 -------------->AGL1<-----------GT1  <---------ANAC58                            <---------ZAT6   tccttttcaggacaacttgttttttctttttctttccttgtgtgcttttgccttttgattttagtttgagtaattttgctctagacttaaagccgcttgt  21883600                                                                  --------->GLK1(2)                                                                ---------->DOF2                                                           --------->At4g35610                                                       <---------ARR14(2)          *TSS                                                       --------->ARR14(2)        <------ZmHOX2a(2)              <---------YAB1                           ------->TEIL        <-----------GT1        <---------MYB52(1)                            <---------GLK1(2)<-------GAMYB     <-------TEIL                                   <---------ATHB12  ----------->GT1 -MYB52(1)  <---------ZAT6 --------->AHL20(2)      --------->ANAC46 <---------ANAC46   tcaaaggtccattagtcttataggcccaaataaacaggtttaagacccattccactgaatcttctgagaagcgggttaaaccgatctaaaccgagaaata  21883700                                        --------->TOE2(2)                                        --------->TOE1(2)                                      --------->ARR11(3)                                      <---------ARR11(3)   <---------ARR14(2)                                --------->ANAC46           --------->ARR14(2)                              --------->ANAC46          ------>ZmHOX2a(2)                              --------->ANAC58<---------ARR14(2)              <----------DOF2 --------->ANAC58--------->ARR14(2)                            ---------      <-------TEIL <----------DOF2---------->DOF2   <---------YAB1           <---------LBD16---------   ttgaaatgttcatcgtcttttctttctctcatacgcgaaagacctgcgaattttgtgatcgaatccaattgtcaatttctcagggtttcgaaaaccctaa  21883800                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                               ------->TEIL                                                                               --------->GLK1(2)                                                                               <-----------ARR10                                                                              <---------CCA1(2)                                                                              <---------GLK1(2)                                                                   ------>ZmHOX2a(2)                          <---------ARR14(2)                     <---------ARR11(3)                    --------->DAG2                               --------->ARR11(3)<---------CCA1(2)                   ---------->DOF2                             <---------ATHB12<---------ARR11(1)             --------->MYB52(1)                              ------>MYB46(1)  <---------ARR14(1) >TOE2(3) <---------At4g35610               <---------YAB1   ------>MYB83 --------->At4g35610       - >TOE1(3) --------->At4g35610     <---------ICU4        <-----------GT1   ------>NtERF2 <-----------GT1   tctctctatggaagctaacaaaaaagcgaaacctagttatggcgatgtgattagcaatttaccaaatgatcttctctgccgaatcttatcttacctttca  21883900                                                                                    --------->LBD16                                                                                   <---------ANAC55(1)                                           <-----------ARR10                       <---------ANAC46                                           --------->ARR14(2)                      --------->ANAC55(2)                                           <---------ARR14(2)                      <---------ANAC55(2)                                           <---------ARR11(1)                      <---------ANAC58           <----------DOF2                 ------->TEIL                            <---------ANAC58         --------->At4g35610              <---------ARR14(1)                    --------->GLK1(2)         <---------At4g35610        <---------AtMYB61                         --------->HSFB2a(1)         <------NtERF2       ---------->DOF2                --------->ANAC55(2) <---------ARR14(2) --------->DOF2   <---------------------WRI1                <---------ANAC55(2) --------->ARR14(2)   acaaaagaggcagctttaacatcgatactctcaaagcgctggtcgaatctacttctatcgatacctattctcgatttcgacgattccgtgttactgaaac  21884000            ------->GAMYB        <---------WRKY38(1)                  ----------->GT1        <---------WRKY45                     <------MYB83        <---------WRKY12                     <------MYB46(1)                                       <-       --------->WRKY18(1)                <---------MYB52(1)                                       --      <-----------HVH21                 --------->ETT(2)                                           <-   --------->DAG2                    <---------ANAC46                                   <---------GLK1(2) ---------->DOF2                  <----------DOF2                             <---------TOE1(2)    --   cccaaaagggtcaacgaaaaaatgtttttttcaaggctttcgtcgataggttactctctcaacgagtcgagacttcatcacatgttcaaagagtctctct  21884100                                                                               ------>ZmHOX2a(2)                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)                                                                             <---------AGP1                                                                            <---------CCA1(2)                                                                        <---------ANAC58     <-----------HVH21                                          ------>ZmHOX2a(2)    <---------bZIP60(1)                                        <------ZmHOX2a(2)    <---------ANAC46                                          <---------ARR11(3)    --------->bZIP60(1)                            ----------->RAV1(1)  <---------ANAC46 --------O2                                       --------->MYB46(3)    <---------ANAC58 ------->TGA1a                             --------->ARR14(2) --------->ARR11(3) --------TGA1a            <---------GLK1(2)<---------ARR14(2) --------->ARR14(2) ------->O2    --------->ALFIN1          ----------->GT1      <---------ARR14(2)<----------DOF2   caagtgtcgtcaaggaggtgttgaaccagattgtgtaatcaagtggatactaacaacagtaagggatcttggtgtcttggatctttctctatgcattgat  21884200  Previous    Next  AGI:  At3g59150.1    Description:  F-box family protein. Identical to F-box protein At3g59150 [Arabidopsis Thaliana] (GB:Q9LX56;GB:Q9LYS1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G42720.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21883683    to: 21885712    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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