Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ----------->GT1                <---------TOE2(3)    <-----------HVH21                <---------TOE1(3)   ----------->GT1         <----------DOF2<---------TOE1(3)          <----------DOF2                 <---------ARR11(3)    <-----------------AGL1  ---------->DOF2 --------->YAB1          ---------->DOF2--------->ARR11(3)  <------ZmHOX2a(1)     <---------TOE2(3)  <---------ATHB12 ------>ZmHOX2a(2)      --------->GLK1(2)   tttaggactcactttggtaaggttttaaggcaaaggagttgtcaaatcatcgtctttgttgatccaatttgaaagaaatgcagaaaatctagagaaattg  21849800                                                                          <------NtERF2                                                                        --------->ETT(1)                                                                      <-----------HVH21                                                            ----------->RAV1(2)                                                           ------->TEIL <---------DEAR3(1)          <---------ANAC58                              --------->ANAC55(2)                       ---          <---------ANAC58                    <---------GLK1(1)   <---------AtLEC2         ----------   ---------->DOF2                       ---------->DOF2<---------ANAC55(2)            <---------HSFB2a(2)   gaaactaaagaagcttgagtctattgcagaacacaaactatacaaaagaaatcggattatgtacctgagcatggtcggagaagagagttgcagaaaagag  21849900                                                                                   <---------AHL20(1)                                                                                   <---------AHL20(2)                                                                                --------->YAB1                                                                                --------->ATHB51                                                                                <---------ICU4                                                                                <--------HAHB4                                                                                -------->HAHB4                                                                                <--------ATHB1                                                                               <---------YAB1                                                                               --------->AHL20(2)                                                                               --------->ICU4                                                                               <---------ATHB51                                                                             --------->YAB1                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                           --------->ICU4                                                                           <---------YAB1                                                                         <--------ATHB1                                                                         --------->YAB1                                                                         <--------HAHB4                                                                         <---------ICU4                                                                         --------->ATHB51                                                                        <---------ATHB12                                                                        <---------ATHB51            <                                                                        --------->AHL20(2)          -                                       <-----------GT1                --------->YAB1<---------AHL20(2) ------>ALFIN1    <-----------GT1   <---------ICU4                   --------->ZAT6--------->AHL20(2) >DOF2         --------->YAB1   <---------YAB1           <-----------GT1--------->ICU4        -------   gtgtctctgttttgcaaaaataactcgtttagttctgatttttacaaaaaaccctcattttacatcttctaacaataattaataattaattttagttaaa  21850000                                                                                         <-----------                                                                                         <---------ALFIN1                                                                                         ------------                <---------ICU4                     <---------AHL20(2)                   -------------                -------->HAHB4                  --------->AHL20(2)                      -------------                --------->YAB1                 <---------AHL20(1)                      --------->SPL7                <--------ATHB1                 --------->AHL20(2)                    <---------SPL7               --------->ICU4              <---------AHL20(1)                       <---------ANAC58               <---------ATHB51        <---------AHL20(1)                           <---------ANAC46          <---------ANAC55(2)          --------->AHL20(1)                           <---------ANAC58     --------->ATHB12                  --------->AHL20(2)   --------->ICU4         --------------->AtSPL8     <---------ICU4              --------->YAB1<---------AHL20(2)                  --------------->AtSPL3    --------->ICU4        --------->ANAC46 --------->AHL20(1)                     --------->ZAT18    <---------YAB1        --------->ANAC58 <---------AHL20(2)                   --------->ZAT18 ---------ARR11(3)        --------->ANAC58 --------->AHL20(2)  --------->ICU4  <---------ANAC58 -------->ARR11(3)   <----------DOF2   <---------AHL20(2)  --------->At5g28300 <---------ZAT6      -- --->DOF2 --------->ANAC55(2)    ----------->GT1<---------AHL20(2)             <---------ANAC58  ----   gagatattgattacttaataattcttttaagccaagagtaattaattaattaatttatggcagtaattgttgtatattctagtgtgccgtaccacttgta  21850100                                                                                         >>>>>>>>>MYB98                                                                                         ------>MYB46(1)   <---------AHL20(2)                      --------->AHL20(2)                            ------>MYB83   <---------AHL20(1)                      ----------->TBP                               --------->ANAC58   --------->AHL20(1)                      <---------AHL20(2)                            --------->ANAC58   --------->AHL20(2)                    ----------->TBP         <---------YAB1          -------->P--  --------->AHL20(2)               <------ZmHOX2a(1)           <---------AHL20(2)       ------>MYB83  <---------AHL20(2)              --------->ANAC46            <---------YAB1            ------>MYB46(1) ----AGL15                       --------->LBD16        <---------AHL20(2)             <---------ALFIN1 --->AGL15               <-----------RAV1(1)            --------->AHL20(2)            --------->MYB46(3) ---->AGL3           <------------CBF   --------->AHL20(1)  <---------ICU4            <---------MYB59 ---->AGL2         --------->ARR11(3)   <---------AHL20(1) --------->ICU4 *TSS       --------->ANAC46 ------->WOX13(1)  <---------AHL20(1)  --------->AHL20(2)--------->AHL20(2)          --------->ANAC58 -------->CBF   ----------->GT1 <---------LBD16       --------->YAB1   ---------->ID1--------->ANAC58   gcaattaaatttagtagatagtatattgtgttgtccaggaaatatataaatataaaaaataatttttatttttgtctctcagaccagacccaacccatct  21850200                 --------->ALFIN1                                                   <---------HSFB2a(2)                 <---------DEAR3(1)                                                 --------->HSFB2a(2)       ----------->RAV1(2)                                                         ------>ZmHOX2a(2)       --------->At4g35610                                                       --------->ARR14(2)     ------->GAMYB                                    --------->GLK1(2)          <---------ARR14(2)    --------->MYB46(3)           ------>ZmHOX2a(1)    --------->ARR11(3)        <------ZmHOX2a(1) --------->MYB46(3)            ------>ZmHOX2a(2)      <-----------ARR10   <---------LBD16           - --------->REM1(1)       <----------DOF2         --------->TOE2(3)   ------>ZmHOX2a(2)     ---------- ---->ZmHOX2a(1) <---------AtMYB61               --------->TOE1(3)   ==================HOX2a_HOX2a  <   cctacaaccatctgtctcggtggtgttctttgatcctctctctcttacaaacctaaaatctaggcattcgatctcttggggaggatcgagaagaaaagag  21850300                                                                            --------->WOX13(1)               ------>ZmHOX2a(2)                                          <---------MYB52(1)              <------ZmHOX2a(2)                                           <------NtERF2             --------->ARR11(3)                                          <-----------HVH21             <---------AGP1                                              <---------RAP2.6(3)             <---------ARR14(2)            --------->YAB1                ------>NtERF2             --------->ARR14(2)        ------->GAMYB                    --------->RAP2.3(3)         -             <---------ARR11(3)        --------->TOE1(2)                --------->DEAR3(1)    <------             <---------ARR14(3)       --------->MYB46(3)               --------->RAP2.3(1)<----------DOF2             <-----------ARR10       -------->P                      --------->DEAR3(1)  <---------ANAC58 -------->ARR14(2)           <---------------------WRI1          <-------TEIL            <---------ANAC58 >DOF2       --------->ARR14(3)     --------->WOX13(1)       <---------TOE1(2)          ---------->ID1 ---------ARR14(2)        <----------DOF2<---------TOE2(3)  ------>ZmHOX2a(1)       <---------MYB52(1)   cggattcacgatgaagatcttagcgactcttttcgaatcaaccaaggataaatgctatgctcctagcttcatcgccgtcaatctctgtttggcttttatc  21850400                                                                    <----------ID1                                     <---------YAB1         ---------->DOF2           <----------DOF2          <---------GLK1(2)     --------->LBD16          <---------ANAC58     --------->ARR14(2)         ------>ZmHOX2a(1)      --------------------->WRI1  <---------YAB1        <---------LBD16   ------>NtERF2               <---------ARR14(2)    <---------GLK1(1)   <---------At4g35610         --------->GLK1(2)     --------->GLK1(1) ----->NtERF2                 <---------GLK1(2)   <---------YAB1  ---------->DOF2 -----GT1 <---------ANAC58 <-----------RAV1(2)  <---------At4g35610 ----------->GT1 --------->ATHB12<   gatgccgctcttgctttcatcgcattccttcaggttctgattcttggttcttctgatttcctgaaagaaaaagaaaaaatcagtcttgatttgtgaatgc  21850500              <---------MYB52(1)               <---------YAB1              --------->DOF5.7(2) --------->ALFIN1             <-------GAMYB        <---------REM1(1)        ----------->HVH21         ----------->HVH21                                               <--    <---------ANAC46            --------->At4g35610                          <---------GLK1(2)  <----    <---------ANAC58            <---------At4g35610                     --------->ATHB12      <------    <---------ANAC58          <-----------RAV1(2)   --------->ATHB12   <---------YAB1        -------- ---------GLK1(2)          ----------->HVH21<---------YAB1             --------->ICU4        <-------   tagattgtgtgtgaccgttaaggcctgttcggacaggtgaagcattgtgcttattgattaaacgagatgtgagattattgattcttgatgttgaatttaa  21850600                                                                                                <----                                                 <---------WRKY18(1)                         --------                                                --------->WRKY12                           --------->At4g35610                                                --------->WRKY38(1)                        <---------ZAT2         <---------GLK1(1)                      --------->WRKY45                           <---------At4g35610     <---------WOX13(1)             <---------MYB46(3)                                 --------->ANAC46     <--------P                    <---------MYB52(1)                                  --------->ANAC58   <---------MYB46(3)             <-------GAMYB<---------WOX13(1)   <---------WRKY12  <---------LBD16 -------AHL20(2)                 <---------MYB46(3)                 <---------WRKY38(1)--------->ANAC58 -----TOE2(3)              <---------ANAC58   <-------GAMYB   ---------->DOF2        --------->MYB52(1) ---AHL20(2)               <---------ANAC46  <---------MYB46(3)   <-----------HVH21 ----------->HVH21 ->AHL20(2)                <---------ANAC58 --------->ALFIN1  ======================================= --AHL20(2)      <----------DOF2 <-----------RAV1(1)     <---------TOE2(3)  <---------YAB1 --------->ZAT2   tgaattggttgatttcagtctttagagttgtgtgtctgttgttcatgtggttgaccattaagtttaaaggtcaactctatgaataactcacggagctgaa  21850700  Previous    Next  AGI:  At3g59090.1    Description:  similar to TOM1 (TOBAMOVIRUS MULTIPLICATION 1) [Arabidopsis thaliana] (TAIR:AT4G21790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66926.1) Range:  from: 21850174    to: 21853732    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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