Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ---------->DOF2                          <-----------GT1      <---------YAB1                                      --                  --------->ANAC55(2)        <---------ICU4     --------->ARR11(3)              -----               <-------TEIL                 --------->ICU4      <---------ARR11(3)    --------->YAB1 >GAMYB      <---------ARR14(2)           <---------ICU4      <---------YAB1<----------ID1   -------- ->RAV1(1)   --------->ARR14(2)           --------->YAB1      <---------TOE2(3)    --------->YAB1 ---   aaataacaaaattcggattcatgtaatataactgaataacttattcattatcagacaaagtattaagatttcataaaaaaaacaaaaatcataagaagta  21838100                     <---------YAB1                   --------->MYB52(1)                  ----------->HVH21                  ----------->TGA1                 <---------MYB52(2)                                                        <---------                <---------At4g35610                                                        <---------                <---------ZAT2                                                             <---------ICU4                --------->At4g35610                                                        ----------                ----------->RAV1(2)           <---------YAB1                           <---------YAB1            --------->ANAC46                  <---------ATHB12                        --------->AHL20(2)       --------->TOE2(3)                --------->SPL7                <-----------GT1 <---------AHL20(2) <---------YAB1 --------->ZAT2        --------->LBD16                --------->ICU4  --------->YAB1 ------->YAB1  ------->TEIL         <---------LBD16                <---------ICU4   <---------YAB1 ----->DOF2 --------->ANAC58       ------>NtERF2                ----------->GT1  <---------YAB1 --->GT1<----------DOF2          <---------ANAC58           ------->TEIL        <---------ARR11(3) ------>ICU4--------->ANAC58     <---------ANAC58          --------->MYB52(1)   <---------GLK1(2)  <-   aagatgatacctttacgcagctgacgattagttttgcctccggactccatgattcaacaatgaacggagtaattactctcaagattattaaaattagtac  21838200                            <---------GLK1(1)                        <---------TOE2(3)                       --------->MYB52(1)                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   --------->ARR11(3)                   <---------ARR11(3)                   --------->ARR14(2)                   <-----------ARR10                   <---------AGP1                   <---------GLK1(1)        <---------TOE2(3) ------AtSPL8      <---------ARR14(2)      ---------->DOF2         ----------->GT1 ------AtSPL3     <------ZmHOX2a(1)    ---------->DOF2            <------ZmHOX2a(1)       --------->At4g35610 ----->AtSPL8   <---------TOE2(3)  <---------HSFB2a(2)            ============================HOX2a_HOX2a --------YAB1 ---------->DOF2      --------->HSFB2a(2)          <---------TOE2(3)      <------ZmHOX2a(2)   tactattacacagcgataaaggatctaacgatttctgctcgaaaagaaagagagaaatcggcaattgaggagaaaaactaagaattgagatcagaagact  21838300                          ----------->GT1                                                           <             <---------ANAC46                          --------->TOE1(2)                           <-             <---------ANAC58                        <-------TEIL                                  --             <---------ANAC58                   --------->AHL20(2)                        <------ZmHOX2a(2)        <---------REM1(1) <------ZmHOX2a(1)     <---------AHL20(2)                       --------->ARR11(3)      --------->ZAT14   <---------TOE1(2)   --------->HSFB2a(2)                          <---------ARR11(3)      <---------ZAT14   <---------TOE2(2)   <---------HSFB2a(2)      <---------CCA1(2)  --------->GLK1(1)   cgtattagtgaagtagcttgcaatcgaaggattaaaacctagttttctaaaaaaattcatgcgattttctcttatctgtttcttccacagagatcaacga  21838400             ----------->GT1             --------->ANAC55(2)             <---------ANAC58             <---------ANAC58                                                             <---------DAG2             <---------ANAC55(2)                                                          <----------DOF2      <-------TEIL                                                                      <---------At4g35610    <---------GLK1(2)                                                                   <---------ZAT2    --------->ARR14(2)                                                                 <---------TOE1(2)    <---------ARR14(2)                                                            <-----------HVH21  ----------->ARR10                                                             <---------DEAR3(2) ------ZmHOX2a(2)                                                             --------->ATERF1(1) --------ARR11(3)                              ---------->DOF2          <-----------RAV1(2) ------->ARR11(3)                 --------->YAB1           ---------->DOF2 <------ZmHOX2a(1)        -   agatcagattcgaatgcgtaatttgaagcaaaacaatgagaaacaaaatcaaagagcgatagaaagagagaggctcaggagtcgggtcgcagctttttct  21838500                                                  <---------WRKY18(1)                                                 --------->WRKY12                                                <---------WOX13(1)                                               <---------ANAC58                               <------                                               <---------ANAC58                               -------                                              <---------MYB46(3)                              <------                                          --------->ATHB12                          <---------YAB1<--                                         <---------YAB1       <-----------GT1      <---------AHL20(2)   -------->HAHB4                       <---------ANAC58      --------->YAB1     <---------------AGL15   <---------ICU4                   <---------At4g35610   --------->AHL20(2)     ====================   --------->YAB1       <---------At4g35610<------------CBF--------->WOX13(1)    <---------YAB1<----- -------->YAB1         --------->ALFIN1 <---------ANAC58  <---------AHL20(2)  <---------YAB1 --------   attaataatcgtgtttgttttcagagtgctgatttgtaagatgcttattggttgacttaattaatcacattctatacgtttttattattttagtaatttt  21838600                                                                           <-----------HVH21                                                                         ------->MYC3                                                                         -------->ABF1                           --------->ANAC58                              <-------MYC4                           --------->ANAC46                              <-------MYC3                           --------->ANAC58                              ------->MYC2         --------------->AGL15                                           ------->MYC4         <---------------AGL15                                           <-------MYC2         <----------DOF2 <---------ALFIN1                               ===================bZIP_DOF  <---------At4g35610   ------>MYB46(1)                                 --------->TGA1a ---AHL20(2)            ------>MYB83                                    <---------ANAC55(2) -->AHL20(2)            -------->P                                      --------->O2 ---AHL20(1)            <---------REM1(2)                               <--------ABF1 ---------GT1         --------->AtMYB61                                 <---------O2 ========================MADS_MADS            <------ZmHOX2a(1)         --------->ANAC55(2)       --- ----AHL20(2)      --------->GLK1(1)         <---------YAB1             <---------TGA1a <------ZmHOX2a(1) ->ICU4 <-----------------AGL3            --------->ICU4    ------>ZmHOX2a(1)   <----------DOF2  ----   tttctgcttcgctttaatcggaaacctacacgctcgagtatgtgattaggataaactcgctcctcttgtaagacacgtgtcactttagaaggacataatc  21838700                                                                                --------->ALFIN1                                                                             --------->ALFIN1                                                                         <---------ARR14(2)                                                                         ------->TEIL                                                                     --------->SPL7                                                                   <---------SPL7                                                                   --------->TOE2(2)                                                                   --------->TOE1(2)                                                                  <---------ANAC55(1)                                                                  <---------ANAC58                <--                                                                  <---------ANAC58                <--                                                                  <---------ANAC46            -------                                                                  <---------ANAC55(2)         <------                                                                  --------->ANAC55(2)       ---------                       <---------TOE2(3)              --------->ANAC58--------->ANAC58      ---------               <---------MYB52(1)          <------MYB83          <---------------AtSPL3     ---------           <---------At5g28300             <------MYB46(1)       --------------->AtSPL3     ---------          <-----------GT1<------ZmHOX2a(1)--------->MYB59      <---------MYB52(1)  <---------ANAC46 ------>At5g28300<---------DOF5.7(2)      --------->MYB111(1)<---------MYB46(3) <---------ANAC46<---- ------->GT1   --------->DOF5.7(2)       <--------P   --------->ANAC58--------->ANAC58      ---------   ggtaatttgatttcaccgttaacttgaggaaactaaaaatcgagtaggtatgggactcgctagtcgttacgtacgaatcgtggtggagtaaaccacgtta  21838800       <---------MYB52(1)     <---------ANAC58     --------------->AGL15 -------ANAC58 -------ANAC58 -->DOF5.7(2) ---MYB52(1) >O2 <---------ANAC58 >ANAC46                 <---------ANAC58                   --------->YAB1            ----------->GT1 >ANAC58                 <---------ANAC58                  <-------TEIL             <---------ICU4 >ANAC58           <---------ANAC46              <---------TOE1(3)               --------->YAB1 -----DOF5.7(2)    <---------ANAC55(2)           <---------TOE2(3)              <---------YAB1 >bZIP60(2)       <---------TOE2(3)----------->GT1   <-------TEIL       ---------->DOF2<-----------HVH21   gcgttttccgttttttgtataacgtatgcgttttgagcagtaatatgggttaatgttcatattcatagacccaaaaaagcccatgataatgtcaaatgca  21838900                                                                                        <---------ALFIN1                                                                                      ----------->RAV1(1)                                                                           <----------DOF2                                                                          ------>ZmHOX2a(2)                                                                        <---------ARR11(3)               <---------AHL20(2) ------->TEIL                   ------->MYC3        --------->ANAC46           ------>ZmHOX2a(1) --------->At4g35610    ---------->DOF2     --------->ARR11(3)   --------           <----------DOF2   <---------At4g35610--------->YAB1   <-------MYC3 <---------TOE2(3)<-----   ggcctagtctatcctttttattttgtttttctgatgaaccttgagaacaaatataaaagtattgacacatgtatgatctttaggttcccaacacttgatt  21839000  Previous    Next  AGI:  At3g59050.1    Description:  ATPAO3 (POLYAMINE OXIDASE 3); oxidoreductase. similar to ATPAO2 (POLYAMINE OXIDASE 2), amine oxidase [Arabidopsis thaliana] (TAIR:AT2G43020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69965.1); similar to amine oxidase family protein [Musa acuminata] (GB:ABF69974.1); similar to H0215F08.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66792.1); contains InterPro domain Flavin-containing amine oxidase; (InterPro:IPR001613); contains InterPro domain Amine oxidase; (InterPro:IPR002937) Range:  from: 21835673    to: 21838486    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g59052.1    Description:  CPuORF18 (Conserved peptide upstream open reading frame 18) Range:  from: 21835673    to: 21838486    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g59060.1    Description:  PIL6 (PHYTOCHROME-INTERACTING FACTOR 5); DNA binding / transcription factor. similar to PIF4 (PHYTOCHROME INTERACTING FACTOR 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G43010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69966.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 21838982    to: 21841484    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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