Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC55(2)                               <---------ANAC55(2)                               <---------ANAC58                          --------->ATHB12                          --------->YAB1                          <---------ICU4                          <--------HAHB4                         --------->ICU4                         <---------ATHB12                         <---------YAB1                       <---------ICU4                       --------->YAB1                      --------->ICU4                    --------->YAB1 ----------DOF2    <---------AHL20(2) ------ARR11(3)   <---------AHL20(2) --------->AHL20(2)                                <------------- ----->ARR11(3)   --------->AHL20(2) <---------AHL20(2)                 <---------ALFIN1 -->DOF2     <----------DOF2   <---------ANAC58<---------ANAC46    -------->P         <------ZmHOX2a(1)   ttctttgatcacagtctttttttaataatcattacttgataaattatctacgtggaaaacaatacatcttacccccatttcatttggaggatgtacaatg  21829600                                                                                                   <-                                                                                     --------->MYB46(3)                                                          ----------->GT1            <---------MYB55(2)                                                     <------MYB83                   --------->ANAC46                                                     <------MYB46(1)                --------->ANAC58                   --------->MYB55(2)               --------->MYB111(1)             --------->ANAC58                   <---------MYB46(3)               --------->MYB59        <----------DOF2         <-                 <---------MYB52(1)   <---------MYB46(3)  <---------ZAT6  --------->TOE2(3)        <- --AtSPL8      <---------MYB46(3)    <-------TEIL   --------->MYB46(2)    <---------DAG2    <-------TEIL   tgtcaatgtgagactagccgttggatgggtctactcacattcgttgaagaacattaggtactgttaaaacttacaacctttttctcacccaatgtgcatt  21829700      <---------ANAC58      <---------ANAC58      <---------bZIP60(2)                                <------ZmHOX2a(2)   ----------->HVH21                                    --------->ARR14(2)  <-------MYC3                                          <---------ARR14(2)  ------->MYC3            <---------ARR11(3)        --------->ZAT14 --------ANAC58        <----------DOF2 --------->ANAC46<---------At4g35610 --------AtLEC2   <-----------GT1<-----------GT1    <---------ZAT18       <-----------GT1        <--- --------ANAC58<---------ZAT6<----------DOF2        <---------ZAT14   <----------DOF2            <---   tgcatgtgacatgcctagtgttactctttatctttttacacacataagtttcagtgcagatcagatgtttctctttttacattttgtcaacaagtttcac  21829800                                                                               <---------TOE2(3)                                                                              <---------At5g28300                                                                         <---------------AGL15                                                                         --------------->AGL15                                                                        ----------------->AGL1                                              --------->TOE2(3)         <-------TEIL                                            --------->AHL20(1)          <-----------------AGL1                                            <---------AHL20(1)          ----------------->AGL2                                         >>>>>>>>>>GT-3b                ----------------->AGL3    <--         --------->DOF5.7(2)          --------->ANAC58        --------->ARR11(3)                 <---  <---------At4g35610 --------->DAG2  --------->ANAC46        <---------ARR11(3) --------->At5g28300< -------DOF2         ---------->DOF2  --------->ANAC58   --------->At5g28300  <---------LBD16   <---- ------DAG2    ---------->DOF2    --------->CCA1(2)     ----------->GT1 <-----------------AGL2<------   ttttagctatcgtttacaaaagaaaaagtttcaaatatacaagaaaaatattaatcggcagtaaaatctctaagtccatttacggtaaccagagaatggt  21829900                                                     <---------ATHB12                                                   <------------CBF          <---------YAB1                          --------->ATHB12         --------->ARR11(3)               <---------ARR11(3)         <---------ARR11(3)               --------->AGP1 ------------>CBF        --------->YAB1      --------->MYB52(1) <-----------GT1                 <---------GLK1(1)  --------->ZAT6            ------>MYB83  --------->ARR11(3)           --------->MYB46(3) -----GAMYB--------->YAB1   ------>MYB46(1) ------>ZmHOX2a(2)        <---------DOF5.7(2) ------MYB46(3)           <---------MYB59--------->GLK1(1)          <---------WRKY12                < -----------GT1 <---------YAB1           <---------GLK1(1)          <---------WRKY45 ----------->RAV1(1) ----P <---------YAB1     --------->AtMYB61<------ZmHOX2a(2)        <---------WRKY38(1)     --------- ---MYB46(3)    --------->ICU4  <-----------HVH21--------->MYB46(3)--------->WRKY18(1) --------->YAB1   tgttacactatgatcatcaagattaagaccaaacagtcacaagagatcttaaccattgattcaattttggtcaacgactcgaactcccaacataaccaaa  21830000                               <---------ANAC58                             <------MYB46(1)                            <---------DEAR3(1)                           <--------P                           <---------MYB55(1)                         --------->LBD16                       <------NtERF2                   --------->ANAC46                            ----------->GT1                   --------->ANAC58                            <----------ID1              ---------->DOF2<------MYB83                     ----------->GT1            --------->AHL20(2) <---------ANAC58              --------->DAG2            <---------AHL20(2) <---------ANAC46             --------->DAG2      ----------->GT1  <---------LBD16                     ---------->DOF2      --------->YAB1------>NtERF2                     ---------->DOF2                    --------->MYB52(1) -----------HVH21  --------->ANAC58             *TSS--------->AtMYB61           <------ZmHOX2a(1) -------->AG--------->YAB1<---------MYB52(1)  --------->MYB46(3)         --------->MYB52(1)--------->ANAC46   acagtcagtcgtaataaaaagacgccccggtaggcgtataacagaacaacaacaccaaaagaaaagggaaaaaaaaaacagaggaactaataaacggacc  21830100                                                                                                   <-                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                       <---------ALFIN1                                       -------                                      --------->ZAT14                                         ------>NtERF2                                      <---------ZAT18                                         <------                                      <---------ZAT14                                        --------                                      --------->ZAT18        --------->MYB52(1)              --------                                 --------->ANAC58       --------->MYB52(1)                  <--------                                 --------->ANAC58    --------->At4g35610            =================              --------->TOE1(2)  --------->ANAC46    <---------At4g35610            =================     <---------ALFIN1            --------->O2 <---------ARR14(2)                    <------ZmHOX2a(1) <---------At4g35610    <---------MYB52(1)    <---------GLK1(2)                --------->CCA1(2)----- --------->At4g35610   <---------RAP2.6(3)    --------->ARR14(2)      --------->ANAC46  <-----------ARR10   atgagctccacagagacatacgagccgttattgacacgactccactcggattctcagataactgaacggtcttcgccagagatagaggagtttctccgcc  21830200      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR14(2)    <---------ARR14(2) --------ANAC46 ----NtERF2 -->NtERF2 ------RAP2.6(3)            <------NtERF2 --------HVH21             <---------MYB46(3) ---->RRTF1(3)            <---------RAP2.6(2) ---->RAP2.3(2)           <---------ANAC46 ---->RAP2.3(3)         --------->MYB55(2) --->ATERF1(1)          --------->ABI4(2) --->RAP2.3(1)         --------->ALFIN1 -->LBD16              <---------AtMYB61               <---------HSFC1(2) ---ATERF1(1)       <---------DEAR3(1)      --------->ALFIN1 ->ANAC46         <---------ALFIN1    <------NtERF2 ---------->DOF2 ->DEAR3(1)    --------->bZIP60(1)--------->ZAT2   <---------WRKY38(1)                         ------ -LBD16     ----------->HVH21  ---------->DOF2     <---------WRKY45                            <----- ============HOX2a_HOX2a<---------MYB46(3)<-----------RAV1(1)                      <---------ZAT14 ===========HOX2a_HOX2a<---------DEAR3(1) --------->ALFIN1              <---------LBD16 <---------ZAT18 ---->DEAR3(1) <---------bZIP60(1)<---------At4g35610  --------->HSFC1(2)          --------->ZAT14   gtcgtggatccacagtgacaccacggtggtggctaaagctggcagtgtgggagtcaaagcttctatggacactctctggagcctctatagtggtctctgt  21830300                                                                   <---------ATERF1(1)                                                                   --------->ABI4(2)                                                                   ------>NtERF2                                                                  <---------DEAR3(1)                                                                 --------->RAP2.3(1)                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                --------->LBD16                                                                <---------ATERF1(1)                                                                <---------DEAR4(2)                                                                <---------ERF1                                                                ------>NtERF2                                                                <---------ORA47(2)                                                                <---------RAP2.3(1)                          <---------MYB52(1)                   <---------RAP2.3(2)                         <-----------HVH21                     <---------RAP2.3(3)                         <-----------TGA1                      --------->ATERF1(2)                        --------->DEAR3(1)                     <---------ATERF1(2)                        --------->ANAC46                       <---------DEAR3(1)                   <-----------HVH21                           --------->DEAR3(1)                 <-------TEIL                                 --------->ATERF1(1)--------->DEAR3(1)              <---------At4g35610                             <---------LBD16   --------->MYB46(3)              --------->At4g35610                        <---------At4g35610    --------->DEAR3(2)     <-----------------------TaNAC69(2)                  --------->ZAT2        ------>NtERF2    <-----------GT1<-----------TGA1     <---------WRKY38(1)  <---------ATERF1(1)<------NtERF2 --->ZAT14    <---------ZAT2          <-----------HVH21  --------->At4g35610  <---------ALFIN1 ----ZAT14    --------->ZAT2 --------->ICU4              <---------ZAT2       --------->DEAR3(1)    -   tctgaattacatgctcagcttcgtcaccgtcatgttcaccggtcatctcggttctcttcagctcgccggcgcttccatcgccaccgtcggaatccaaggc  21830400                                                                               --------->AHL20(2)   -                                                                               <---------AHL20(2)<---           --------->YAB1                                       <---------ANAC55(2)              ----          <---------YAB1                                        --------->ANAC58                 <---    --------->SPL7                                              --------->ANAC55(1)              ----   --------->MYB52(1)                                           --------->ANAC55(2)             <----  <---------SPL7                         ----------->GT1        --------->ANAC58             -------- <---------ANAC58        <-------TEIL   --------->DAG2          --------->ANAC46             <------- <---------ANAC58--------->SPL7        ---------->DOF2  <---------ZAT14    <---------ANAC46<---------AHL20(2) -------->ZAT2 <---------SPL7      <-------TEIL --------->MYB52(1)    --------->MYB52(1)  <---------YAB1   ctagcttacggtatcatggtacgaaggcacatttgagttcataaagtaaaaaacagagtgaagaacacgaaacaacgtcgtttaattctatatttattgt  21830500  Previous    Next  AGI:  At3g59030.1    Description:  TT12 (TRANSPARENT TESTA 12); antiporter/ solute:hydrogen antiporter/ transporter. Identical to Protein TRANSPARENT TESTA 12 (TT12) [Arabidopsis Thaliana] (GB:Q9LYT3); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT3G21690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69963.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69962.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 21830048    to: 21832417    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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