Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->YAB1                                                  --------->At4g35610     ------>ZmHOX2a(2)                                                  --------->ZAT2         <------ZmHOX2a(2)                                              --------->ANAC58          --------->ARR14(2)                                              --------->ANAC58          <---------ARR11(3)                                             --------->WOX13(1)         --------->ARR11(3)                                            ---------->DOF2             --------->GLK1(2)                                          <-----------HVH21      --------->WRKY12                                         --------->bZIP60(1)     --------->WRKY38(1) -------DOF2                             <---------ANAC46        ----------->HVH21               <--- ->ZmHOX2a(2)                            <---------bZIP60(1)  <---------MYB46(3)                <---- -----ICU4                              <------NtERF2  --------->ANAC58 <---------ARR14(2)    <------ ---ARR11(3)                          --------->ALFIN1 --------->ANAC58 <---------AGP1      <-------- -->ARR11(3)                  <-----------HVH21   <---------At4g35610  <------ZmHOX2a(1) <---------HSFB2a(2)   tttacgcttgatgacaacgatgcgatacaacatgtcgagggtgtcgtcaagcagctcaaggcagtcgttgacaggatctagcatgagggtttgagaagta  21815800                                                     <---------ZAT2             <----------DOF2                                             --------->ALFIN1       --------->ZAT2        <---------ANAC58                   <---------ANAC58         --------->At4g35610    ---------->DOF2                        <---------ANAC46         <---------ZAT2<---------MYB46(3) ------DEAR3(1)                            <---------ANAC58       <---------ZAT14 <-----------RAV1(1) -----ZAT14                        ---------->DOF2   --------->At4g35610        <---------MYB52(1) ---SPL7<---------ANAC58        --------->ANAC58     <---------At4g35610   --------->GLK1(1) -------AtSPL8   ---------->DOF2--------->ANAC58     --------->ZAT2 <---------At4g35610          <---   cggtgcgaaagcgtgagattaaaggcgagagaacgagcaaagagagcgtggtccaagctgagttggactgagctgagaaaccctttgttggaagaagttg  21815900         <---------HSFC1(1)              --------->ARR11(3)         --------->HSFC1(1)              <---------ARR11(3)         <---------HSFB2a(2)       <---------ANAC58         --------->HSFB2a(2)       <---------ANAC58    <------MYB46(1)           <---------ANAC58    <------MYB83              <---------ANAC46                                             <---------   <---------AtMYB61          <---------ANAC58                             <---------ARR14(2)   --------->MYB59        --------->ALFIN1                                 --------->ARR14(2) ------ANAC46      ------->TEIL    <---------ANAC46             <---------YAB1  --------->ZAT14   agggtttggttctcgaagatgaatcggagtttgggtgtcttgagatttttgtgaatttagagtttgatgaatgggcaaatactgaagtctgaagggacaa  21816000                                              <------MYB46(1)                                              <------MYB83                                             --------->MYB59                                         --------->ATHB12                                --------->LBD16                                                    <-                               --------->HSFB2a(2)                                                 <-                               <---------HSFB2a(2)                                                 <-                   --------->TOE2(3)    <---------YAB1                                         ------            =========================HOX2a_HOX2a                          <---------YAB1      <------  <-------TEIL  ----------->RAV1(1)  --------->ICU4         <---------REM1(1)               --------- -ID1       <------ZmHOX2a(1) ------>ZmHOX2a(2)     --------->YAB1 >>>>>>>>>>>>>>>>>LFY  <----------DOF2   gaggttcaagactaggaacaacattagtttgatcccgaacttatgatttggtaatgagaatgatgtagttgccattgtgatatatgtgcaactttgatga  21816100                                                  <---------ANAC58    --------->ZAT14                   --------------->AGL15    <---------ZAT14                   <---------------AGL15 <---------ANAC46                    <-----------------AGL3 --------ANAC46              <---------WOX13(1)   <---------ANAC58 --------ANAC58            --------->ATHB12       --------->ANAC55(2) --------ANAC58           <---------YAB1          <---------ANAC55(2)       <---------TOE2(3) --->ATHB12             <---------ANAC55(2)       ----------->GT1   ----------->GT1 ---YAB1           <---------ZAT6  --------->GLK1(2)    --------->AHL20(2)  ----------->GT1 >YAB1<---------ANAC46  --------->ANAC55(2)       <---------ANAC46 <---------TOE1(2)       *TSS<<<<<<   ttcgtgtgtagtagagaagaagtgttatgtgattgctaatctatatatagtttcgtaataaactactactaggttattaagaaaaaaaactaaactagaa  21816200                                        --------->YAB1                                        -------                                       <-------TEIL                                           -------                                    ------>MYB83                                             <-------                                    ------>MYB46(1)                  <------MYB83 <---------YAB1                          <---------AtMYB61                        --------->ALFIN1     <---------TOE2(3)              <---------DAG2      <---------MYB59           <------ZmHOX2a(1)     <---------AHL20(2)            ------->TEIL  --------->ALFIN1              --------->LBD16           --------->AHL20(2)   <---------SPL7        <------ZmHOX2a(1) --------->AHL20(2)      <--------P  <----------DOF2------- <ZML2     <---------ARR14(2)--------->ALFIN1      <---------GLK1(1) <------MYB46(1) <---------YAB1   ctaggtgtacgaagaaccttttgaagaggaggtggaccaaattcataaattcgagttccgaaggacaaggttgggaagagactttttattaatgtattat  21816300                                                                                <---------AHL20(2)                                                                                <---------YAB1                                                                               --------->YAB1                                                                    <----------DOF2      <---------YAB1          <---------ANAC58                   <---------ARR11(3)   <---------MYB52(1)         <---------YAB1                     --------->ARR11(3)  <-------GAMYB               <---------ANAC55(1)               <---------CCA1(2)   <-----------GT1 ->ATHB1            ----------->GT1                       <-----------HVH21    <---------AHL20(1) -->ATHB51        <--------P  <---------ANAC58           ----------->GT1       --------->AHL20(2) --YAB1         ----------->GT1    ----------->GT1      --------->DAG2       --------->ICU4 -->ATHB12<-------TEIL   <---------ICU4               ---------->DOF2     <------ZmHOX2a(2)   tgcccgttatgatacatcgggttagaaaaattacgagtggaaatactcttaagaaaaaaaggtcatatatctttagatcaatattattacatttctaaga  21816400                                                                                              -------                                                                                             --------                                                                    <---------WOX13(1)       <-------                                                 --------->TOE2(3)--------->ATHB12     ---------->DOF2                                             <---------MYB52(1)  <---------YAB1     --------->YAB1                                        <-----------GT1  --------->TOE2(3)      <---------AHL20(2)                                      <---------ANAC58 <---------ARR11(3)      <---------ARR11(3)       --------->YAB1    --------->ATHB12<---------At5g28300 <---------YAB1    --------->AHL20(1)      <---------ATHB12  --------->ICU4<---------ANAC58 --------->ARR11(3)      <---------AHL20(1)   aaactcaaatgataagtttatttgaattgattagcatatttcttaccgttttcttaaaatcttatttttgattgaaaactatatatttataaagagatat  21816500                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                           <---------ANAC46 <---------AHL20(2)                                                  <-----------GT1 <---------YAB1                                                 <---------ANAC46 -->CCA1(2)                 --------->ICU4                      ----------->GT1 ->ARR11(3)          <---------At5g28300        <---------ETT(2)<---------ANAC58 --ARR11(3)         <-----------GT1 --------->ICU4              <---------ANAC58       <---------TOE2(3)   agttttattgaaaactatagttttactgtaatgttgtcatgttgaaactgttgacatatcaacatagcgtttaacttacttgtggttttaagttttagtg  21816600                                   ---------->DOF2                   --------->AHL20(1)                   --------->AHL20(2)                   <---------AHL20(1)                                              <---------ZAT6                  --------->AHL20(2)                                     <---------ANAC46                  <---------AHL20(2)                                     <---------ANAC58     -------              --------->AHL20(2)  <---------AHL20(2)  ------>ZmHOX2a(2)  <---------ANAC58<---------ATHB51 --------->WOX13(1)<---------AHL20(2)       <-----------GT1             <---------MYB46(3)--------->YAB1   aatcagtcaatataaactaaataaattttcttatatataaagaatattacatttgatcgagttttgtaaacaattggttgtattagtgacaataatgtgt  21816700  Previous    Next  AGI:  At3g59010.1    Description:  pectinesterase family protein. similar to ATPMEPCRD, pectinesterase [Arabidopsis thaliana] (TAIR:AT2G43050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45285.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 21813782    to: 21816191    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version