Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->LBD16                       --------->ANAC58                       --------->ANAC55(2)                       <---------ANAC55(2)                       --------->ANAC46                      ------>ZmHOX2a(2)                      <---------LBD16           <---------ICU4                    <---------ARR11(3)      --------->DEAR3(1)                    --------->ARR11(3)     <------NtERF2                    <---------ARR14(3)    ------>NtERF2                    --------->ARR11(1)    --------->LBD16                    --------->ARR14(3)    <---------ATERF1(1)                    --------->ARR14(2)   --------->RAP2.3(2)                    <---------ARR14(2)   <---------DEAR3(1)                   <---------HSFB2a(1)   --------->RAP2.3(3)                                    <----                   --------->HSFB2a(1)   <---------ATERF1(2)                           ------->GAMYB                   <---------HSFC1(2)    --------->DEAR3(1)                           --------->ANAC58                  ----------->ARR10      --------->ATERF1(2)                          --------->ANAC46                  ---------->TaMYB80    --------->ORA47(2)                            --------->ANAC58              --------->LBD16           --------->RAP2.3(1)                          <---------------             <---------LBD16       <---------ICU4 <---------YAB1                    --------->MYB52(1)             <---------ANAC46     --------->ICU4--------->YAB1                <---------HSFB2a(2)            <---------LBD16  ------->GAMYB--------->ABI4(1)                   --------->HSFB2a(2)        --------->ARR14(2)  --------->MYB46(3) --------->ICU4                 --------->LBD16 <------        <---------ARR14(2)----------->RAV1(1)  <---------ATHB12               ------>ZmHOX2a(1)<-----       --------->ALFIN1--------->ANAC58 --------->DEAR4(2)                   <---------LBD16 <-------     <---------ANAC46<------ZmHOX2a(2)  --------->ATERF1(1)            <---------At4g35610 --------->HSFB2a(1)     <---------ANAC58--------->CCA1(2)  --------->ERF1                 <---------CCA1(2)   <---------HSFB2a(1)     <---------ANAC58--------->ARR14(1)<---------RAP2.3(1)   <----------DOF2----------->RAV1(2)------   aactggagcgtgttcgcgggaagatccgcaaccgaaattatcgccgccgatgatgactgagtactttgatttcatctctcctggaacaacgaaacgttcg  21808900                                                                                       <------NtERF2                                                                                      --------->LBD16                                                                                      ------>NtERF2                                                                                     <---------ANAC46                                                                                     <---------DEAR3(1)                                                     --------->HSFC1(1)             <---------LBD16                                                     <---------HSFB2a(2)            <------NtERF2                                                     --------->HSFB2a(2)          <---------DEAR3(1)                             ---------->DOF2        <---------LBD16          <---------SPL7                           ---------->DOF2       ------>ZmHOX2a(2)          <---------ANAC58 ---GAMYB                --------->ANAC58       <------ZmHOX2a(2)           <---------ANAC46 ------WRI1              --------->ANAC58      --------->ARR14(2)           <---------ANAC58 -TEIL  --------->MYB59 <xxxxxxxxxxxxxxxxsmallRNA(se3)                     --------------->AtSPL3 ----MYB46(3)      ---------->DOF2             <---------ARR11(3)         <---------ZAT18 --MYB52(1)       <---------MYB52(1)           <---------ARR14(2)         --------->ZAT18 --->MYB52(2)    <---------RAP2.6(3)           --------->ARR11(3)>>>>>>>>>NAM<---------RAP2.6(3)    -   ttgtagaattttggtaagccgttaagcgcgaaagagccgagtttctcgcgatcttctggaatcgaagggatgagagtgccgtactcggcggggattattt  21809000                                                                                                   <-                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           ------>NtERF2                                                                                          --------->O2                                                                                          <---------TGA1a                                                                                          --------->TGA1a                                     --------->LBD16                                      <---------ANAC46                                    <---------ANAC58                                      <---------O2                                    <---------ANAC58                         <------ZmHOX2a(1)     --                                    <---------ANAC46                         ========================                <----------DOF2--------->At4g35610               ----------->RAV1(2)   --------->DEAR3(1)     <------NtERF2          <---------At4g35610                --------->ANAC58        ----------->HVH21 ----->ZmHOX2a(2)           --------->At4g35610                --------->ANAC58       <---------At4g35610   gatcggtgtcgatgttgtctttcaagacgaagcagaggccgtggaaagtctctctggttattgactcgcctgaatcggaggatgatgcagcgacgcgtgt  21809100           --------->ALFIN1          --------->ATERF1(1)          <------NtERF2   =================HOX2a_HOX2a   ------>ZmHOX2a(2)   ====================HOX2a_HOX2a --------->ARR11(3) --------YAB1   <------ZmHOX2a(1) -TGA1a  --------->LBD16 -ANAC58<---------ANAC58 -O2    <---------DEAR3(1) -ANAC46<---------ANAC46 >TGA1a<------NtERF2                                <------NtERF2 -ANAC58<---------ANAC58                            ------>NtERF2  ---------->DOF2 >O2   <---------LBD16     <---------ANAC46      <------NtERF2   --------->ANAC58 ------->ICU4<------ZmHOX2a(1) <---------YAB1    --------->ATERF1(1)                   <-------TEIL =========HOX2a_HOX2a    <---------MYB46(3)    <---------DEAR3(1)--------->ANAC58<------NtERF2   gatgatcgtggcggaggaggaagtaagtggtttgtaattgaaaattgtggaggcggacttgagttgcaagaaaggagatgggcagagagtacatgagttt  21809200                           --------->REM1(2)                           --------->ZAT14                <---------ARR14(2)                --------->ARR14(2)                                                           --------               <------ZmHOX2a(1)                                                          --------->ANAC58             <---------TOE2(3)                                                            --------->ANAC58             <---------TOE1(3)                                                         --------->ARR14(2)         <---------At4g35610           <---------ICU4                                 <------ZmHOX2a(1)         --------->At4g35610   ----------->GT1         <------NtERF2            *TSS --------->ANAC58      <------ZmHOX2a(1)    <---------ZAT14           --------->RAP2.6(2)       ---------->DOF2    <---------TOE2(3)     --------->ALFIN1  <---------ANAC46     <---------At4g35610 --------->ANAC58   ttgtttgaggaagctaaggatttgaagagtgtagggtttaaaaattgctgagaagtcgccattgttctgctacttcttaagtgaagcaggaaacgaaaca  21809300                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                       <-------TEIL                                                                 --------->ANAC46    <-------MYC2                                     <---------ICU4              --------->ANAC58    ------->MYC3                                     <-----------GT1             --------->ANAC58    <-------MYC3                                 <---------AHL20(2)            ---------->DOF2       --------->TOE2(2)                         ------------>CBF                     --------->ARR14(2)     --------->TOE1(2)   <-----------TBP      <-----------GT1<---------YAB1      --------->ANAC46          ------->MYC2   - ->MYB52(1)          ------->TEIL--------->AHL20(2)      <-----------GT1        ------>ZmHOX2a(1)   -   gagtcatttatagagggaaaatgaatatacaatttttaattacgactataagttagtatttacgaaaacgccattctaagtcctaaacgtgcgtattgag  21809400                 --------->ZAT18                 --------->ZAT14                 <---------ZAT18                 <---------ZAT14               --------------->AtSPL8             <---------MYB52(1)            <-------GAMYB           <---------MYB46(3)           --------->MYB52(2)          <---------------------WRI1        <------MYB46(1)        <---------MYB46(3)        <------MYB83       --------->MYB111(2)       --------->MYB111(1)       <---------AtMYB61       --------->MYB59       <---------MYB46(3)      <--------P<---------ANAC58    <---------MYB46(3)    --------->HSFC1(2)    <---------HSFC1(2)       <---------ZAT18                         <---------AHL20(1)    <---------HSFB2a(1)      --------->ZAT18                 <------MYB46(1)    --------->HSFB2a(1)      --------->WRKY38(1)             <------MYB83<-----------GT1   <---------TOE2(3)       ------->MYC3                      ----------->GT1       ---------->CDC5   <---------TOE2(2)       <-------MYC3                     --------->MYB59--------->ZAT6 -------->ANAC58<---------ANAC58       <-------GAMYB<---------MYB46(3)<---------ICU4           ------ -------->ANAC58<---------ANAC46   <----------DOF2<---------MYB52(1) --------->AHL20(1)    <---------HSFB2a(2)   acacgaaggttggtcgttgtgtactaaaacgtggactctttcgttgttatctgtttgttaatttggttaaaaatattacactaactcagcgttcaagaag  21809500                                                                            <---------AHL20(2)                                                                            --------->AHL20(1)                                                                            --------->AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                        --------->ARR14(2)        --------->LBD16                         --------->ANAC58                        --------->ANAC58                         --------->ANAC58                        --------->ANAC58                        --------->HSFB2a(2)         --------->ZAT6----------->GT1                        <---------HSFB2a(2)       <-----------GT1--------->ANAC46                     <-----------GT1    --------->ICU4          <---------LBD16       --------->DAG2                 <---------YAB1         <---------ARR14(2)    --------->ARR14(2)     ---------->DOF2              <---------YAB1        <---------At4g35610 --------->YAB1 --------->AHL20(2)----------->GT1 ----->GT1 --------->ICU4--------->ANAC46     ------->TEIL    <---------ARR14(2)  <---------YAB1   tcaaaagaatgaactgattattttttccagcaattttcagcaaatatgaatttcacactcatggtatacggaaaaaaattttttatgaaaagtgtgaaat  21809600                                                     ----------->TGA1  <----------ID1                                                     ----------->HVH21 <---------ETT(1)                                              ----------->TGA1    <---------ICU4                                              ----------->HVH21   --------->ARR14(2)                 ===================================bZIP_DOF      <---------ARR14(2)                 ---------->DOF2          <---------O2--------->MYB52(1)             --------->MYB52(1)           <---------TGA1a   ------>NtERF2               --------->At5g28300        <---------YAB1                 ----------->HVH21   --------->DEAR3(1)          ----------->GT1   ----------->GT1                     ----------->TGA1 <---------ETT(2)     --------->ARR14(2)   tgaagtagttaaaattaccgaaagtacaaaacttcacagggctgacgagtgacgactgacgacgaccatatttgcgacaaatctacaaactgtaatttta  21809700                                                                               <---------TOE2(3)                         <------ZmHOX2a(1)               --------->ANAC58    ---------->DOF2                --------------->AGL15                    --------->ANAC46 --------->TOE2(3)               <-----------------AGL2                    --------->ANAC58>>>>>>>>>MYB98  <---------YAB1               <-----------------AGL3          <---------YAB1        --------->TOE1(3)   --------->ICU4             <---------AGP1                  <-----------GT1      <-----------GT1  <-------TEIL<-----   gtgagggttttgctagttctgtttataggatgaaacaaaaactatttttacgatttcatacgcatattataccctaacttaaaggttcgtcatgtttagc  21809800  Previous    Next  AGI:  At3g58990.1    Description:  aconitase C-terminal domain-containing protein. similar to aconitase C-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G43090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65399.1); contains InterPro domain Aconitase/3-isopropylmalate dehydratase, swivel; (InterPro:IPR015928); contains InterPro domain Aconitase A/isopropylmalate dehydratase small subunit, swivel; (InterPro:IPR000573); contains InterPro domain Aconitase-like core; (InterPro:IPR015937); contains InterPro domain 3-isopropylmalate dehydratase, small subunit; (InterPro:IPR012305) Range:  from: 21808035    to: 21809280    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version