Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------HSFC1(2)                                                        --------->HSFC1(2)                                                        <---------HSFB2a(1)                                                        --------->HSFB2a(1)                                                     ------->GAMYB                                                    <---------MYB52(2)                                              ----------->HVH21                        <------MYB83        --------->CCA1(2)                        <------MYB46(1)    --------->ARR11(3)                      <----------DOF2      --------->ARR11(1)                     <------ZmHOX2a(2)                     <---------ANAC58      <---------ARR14(2)                    --------->ARR14(2)                     <---------ANAC58      <---------ARR11(3)             ----------->HVH21      ----                    <---------ZAT2       --------->ANAC58               --------->At4g35610   <------                 <---------ANAC58        --------->ANAC58         <--------P   --------->ANAC58  ----                 <---------ANAC58        ----------->ARR10   ------>ZmHOX2a(1) --------->ANAC58  ----                 <---------ANAC46    <------ZmHOX2a(1) ------->TEIL     <---------At4g35610   <------          ---------->DOF2 <---------ANAC46 --------->ARR14(2)============================HOX2a_HOX2a ------------>WRI1<---------ZAT18   <----------ID1  --------->MYB46(3)<---------WOX13(1)      -------   gagaaccgaagtcaaagcagcgtgcttggtgggaaggaaggacaagatatgacaacgaacctcctctggtagattgctgacacgatccatcttctgtaca  21794200      <---------------AtSPL8                                           --------->GLK1(2)      --------------->AtSPL8                                   --------->WOX13(1)     ---------->DOF2                              ----------->GT1    <------ZmHOX2a(1) ----->ANAC58                                    <---------TOE2(3)--------->YAB1 ---ZAT14                                        --------->MYB59 <---------ATHB12 ----->ANAC46                          <----------DOF2      --------->ANAC58 ----->ANAC58                        --------->At4g35610    --------->ANAC58 ---REM1(2)                          <---------At4g35610--------->TOE2(3)                      <----- -->ZAT14 <-------TEIL   --------->REM1(1)  --------->ZAT6---------->DOF2                    --------   cgagattaaaagtacattacttcatctacaactagagacagctttaacagtaaggtaacattaagcaatcaggaatctaaaacatgaaatcaaacagctt  21794300    ---------->DOF2                          --------->GLK1(2) --------->LBD16--------->ALFIN1         --------->ANAC46         --------->ATHB12 -----DOF2<------ZmHOX2a(1)           --------->ZAT14            --------->ICU4     <---------At5g28300 ->At4g35610  <---------O2            <---------ZAT14            <---------YAB1    <-----------GT1   tcccccaaaagaggagaagtgggaacagagataaacccagttcacagaatcagtagaaacagagaagatgattaaacttcagcatttacctcgttacaaa  21794400                          --------->GLK1(1)                          <---------GLK1(1)  --------->ALFIN1             <----------DOF2                      <---------ANAC46   <---------ZAT14                 <---------ANAC58                     <---------LBD16  <---------ANAC58                   <---------ANAC58                 <-----------RAV1(1)  <---------ANAC58                <---------WOX13(1)   cgcttaatctagtatccaaatgttggggatttcagtgaatgcgtccagtgggaagagagagagcgagaatagattgcttaatcgctagttcatatggccg  21794500                     ------->GAMYB                    --------->ANAC58                    --------->ANAC58                  <---------DOF5.7(2)         --------->CCA1(2)        --------->ARR11(3)        --------->ARR11(1)      <---------LBD16   <---------HSFB2a(1)        <---------ARR11(3)      --------->At4g35610                      ----------->ARR10      ----------->ARR10         <---------At4g35610                  <---------HSFC1(1)           ---    ---------->DOF2 --------->ANAC46            ---------->DOF2      <---------HSFB2a(2)     -------- --------->ANAC58<---------WRKY45          <---------ANAC46          --------->HSFC1(1)------->TEIL --------->ANAC46<---------WRKY12     <------MYB83--------->HSFB2a(1)--------->HSFB2a(2)<---------At4g35610 --------->ANAC58<---------WRKY38(1)  <------MYB46(1)       <----------DOF2   --------->AtLEC2 ------   tagacgcaaagatatgaagtcaacgcaaacatttagcggaaggtagaggggaaagtcccagactttcagttcgagaagacatgctaatgcatcggagaag  21794600                                                      --------->ANAC46                                                      --------->REM1(1)                                           --------->ZAT14                                           <---------ZAT14       ----------->HVH21                               ------>NtERF2         <---------ZAT14              --------->ARR11(3)           --------->ZAT18   <---------ZAT14              <---------ARR14(2)           <---------ZAT18   --------->ZAT14              --------->ARR14(2)--------->SPL7     --------->ANAC46                               ---      ------>MYB46(1)         <---------ZAT18    --------->ZAT6  --------->WRKY38(1)            <----      ------>MYB83          <---------At4g35610 <---------ZAT14<---------At4g35610        <---------ARR14(2)    --------------->AGL15---------->DOF2*TSS    <---------ZAT18<---------bZIP60(2)        --------->ARR14(2) ------>RAP2.6(2)   <---------AtLEC2--------->AtMYB61--------->ZAT14                    --------->LBD16 -->DOF2   <---------TOE2(3)--------->At4g35610 --------->ZAT14<---------O2           <---------LBD16 --->GLK1(2) <------ZmHOX2a(1)--------->ZAT18 --------->ANAC46 --------->At4g35610    <------NtERF2<-   ccgaaaccaaattgaggattttgcattgaaagcggacaccactagtccactacactacaccagtgaggtgacccagtcgagtttaggctccggtttcggt  21794700                                                                                      ---------->DOF2          ----------->GT1                                                   --------->ANAC58       --------->MYB52(1)                                                   --------->ANAC58      <---------WRKY38(1)------------>AtMYB77                             ---------->DOF2      <---------WRKY12 --------->LBD16                                   --------->WRKY18(1)   <---------ANAC46   <---------LBD16           --------->MYB52(1)     --------->ANAC58 ------>ATHB12      --------->MYB52(1)       --------->ANAC58          --------->ANAC58 ------DOF2----------->GT1                   --------->ANAC58 <---------ANAC46    --------->ANAC58 -----------CBF    --------->MYB52(1)        --------->ANAC46<---------AtMYB61    --------->ANAC58   ttattgggtaaacgggtaaacaaaccggggcagtttgaatttgggctacgaaacggcgaaagtatggtggaacaagtcaagcccaagtaaaagcccagta  21794800                             <-------GAMYB                            --------->MYB52(2)                            --------->MYB111(1)                            --------->MYB111(2)                            --------->MYB55(2)                            <---------MYB46(3)                           <--------P                          <-------GAMYB                         <------MYB83                         <------MYB46(1)                         <---------MYB46(3)                       <---------ANAC58                       <---------ANAC46                       <---------ANAC58                  <-----------RAV1(1)                  --------->ALFIN1                                                        <---------YAB1                <---------ANAC58                                                    <------MYB83                <---------ANAC46                                                    <---------ANAC46                <---------ANAC58                                                    <------MYB46(1)           ----------->RAV1(2)                 <---------AHL20(2) ------>ZmHOX2a(1) ----------->GT1           ===================RAV    --------->ALFIN1---------->DOF2          <---------TOE2(3)    ----------->GT1  <---------MYB46(3) <---------AtMYB61     ------>ZmHOX2a(1)  <---------MYB52(1) -   gcaaactggtaaaacctggcctgtggctggttgttgcaagtggtggtatttaaaacaaagtctccttcctcttcttcttaaacgttgggtttaaaattgc  21794900                                                                            --------->CCA1(2)                   ------------------------>ANAC81                         <---------ARR11(3)              <---------AHL20(2)                                    <-----------HVH21   --------->ARR11(3)          <---------------AGL15                  --------->ETT(2) <---------ARR11(3)   --------->CCA1(1)         <-----------------AGL3       --------->ANAC58            --------->ARR11(3)   --------->RVE1(1)         ----------------->AGL3       --------->ANAC58   --------->DAG2    --------->ARR14(2) -------->ZAT14---------->DOF2      ---------->DOF2     ---------->DOF2  --------->LBD16<---------ARR11(3)   agagaagtctatctatataaagagccatagagggagaagaaagcaaacttgtcgaaagaaaagcagaagatgtcccagatatatatcaaatatctgaatg  21795000                                                                                                <----                <-----------GT1                                                                 <----           <---------AHL20(2)                                                                   -----          --------->AHL20(2)                                                                  <------      <---------ANAC58                        ----------->HVH21                               -------      <---------ANAC46              ---------->DOF2                                        <---------At5g28300      <---------ANAC58           --------->YAB1               <---------At4g35610        <---------ATHB12     <------NtERF2<---------At4g35610       <----------DOF2   --------->At4g35610      --------->WOX13(1)   aaatggtgtcgttttaatttagcttctaacaagaatcaaaaagagcctttgacatcaaactatgagctaagtttttcccaagaagacttcaatcactgtg  21795100  Previous    Next  AGI:  At3g58940.1    Description:  F-box family protein. Identical to F-box/LRR-repeat protein At3g58940 [Arabidopsis Thaliana] (GB:Q9LXQ8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G58930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21791762    to: 21794640    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g58950.1    Description:  F-box family protein. Identical to Putative F-box protein At3g58950 [Arabidopsis Thaliana] (GB:Q9LXQ7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G59000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21795093    to: 21796817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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