Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ARR11(3)                         --------->ARR11(3)                         --------->GLK1(2)                         --------->ARR14(2)                  ---------->DOF2      ----------->RAV1(1)                 <------ZmHOX2a(1)  --------->ANAC58            --------->ANAC58        ------>MYB83            --------->ANAC58        ------>MYB46(1)        <------ZmHOX2a(1)<---------ARR14(2)           ------->GAMYB                   --------->ANAC58 -------->DOF2  --------->ANAC58    --------->ANAC58--------->At4g35610               --------->ANAC58 --->ZmHOX2a(1) --------->ANAC58  --------->TOE1(2) <---------At4g35610      <---------At4g35610   ctcaagcgcaggacaagcaggaaagagtatctcaaacctagcaacacaaaattcaactgaatcaagaacaagagttttcagcatcggtaagaaaatgctc  21786700               <------ZmHOX2a(2)               =====================HOX2a_HOX2a              <---------ARR11(3)              --------->ARR11(3)          ---------->DOF2        ------>MYB83        ------>MYB46(1)                                                                             -       ----------->RAV1(1)                <-----------------AGL1                                    -      --------->AtMYB61              <---------At4g35610                                          ---     --------->MYB46(3)              --------->At4g35610                                    ---------  <---------ZAT18             --------->ARR14(2)                                  <------ZmHOX2a(2) -  --------->ZAT14            <---------CCA1(2)                                   --------->ARR11(3)<-  <---------ZAT14            ------>ZmHOX2a(1)                             <-------TEIL  --------->ETT(1)   tcagtccaccaacaaagatcaattccacttcctatcttcagcttaactagtttggaaaccaattggaccaaaaacgatgcatagatcaaggtcggaaaca  21786800           <-----------GT1                                              --------->GLK1(1)     <----------DOF2                                           --------->ARR11(3)                   - -------->ANAC46                  --------->ARR11(3)           <---------ARR11(3)           --------- -------->ANAC58                  <---------ARR11(3)          <---------At4g35610          --------->HSFB2a(2) ------>MYB52(1)           --------->AtLEC2                  ------->TEIL   <---------LBD16<---------ANAC46 >ARR14(2) --------->MYB52(1)    --------->YAB1         <---------AtLEC2<---------GLK1(1)  <---------HSFB2a(2) -------->ANAC58      <-----------GT1                  <-------TEIL <---------HSFB2a(2)   <---------LBD16 --------LBD16 ----------->GT1---------->DOF2    --------->ANAC46   --------->HSFB2a(2)   -----------   ccacggactttattaacgggataatttccctgcaaagataatattctatccacaaaatgcatgaagctctctagaattcccgcttgccctcttccggatg  21786900                                                     ------>NtERF2                                 <-                                       --------->WOX13(1)                                        ---- --------->DOF2              <------ZmHOX2a(1)      --------->DEAR3(1)                           ---- >LBD16                      <----------ID1         <---------ALFIN1                    <----------DOF2 ------>AGL1               --------->MYB59         --------->ATERF1(1)      ---------->DOF2    <-----   aagaaagacagagtcatcgaattcaagattaggaacaaaatcaatgagatagcgccacctcttggagagaagagaagtcaaagcagtctcctttgtggta  21787000                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                             <-------                                                                                             --------                                                                                             --------                                                                     <---------AHL20(2)      <-------                                                                  --------->AHL20(1)         --------                                                       ------>ZmHOX2a(1)                     <-------            ----------->HVH21                          --------->At4g35610                   --------         --------->ARR14(2)                     <------ZmHOX2a(2) --------->AHL20(2)        <--------   <------ZmHOX2a(1)                            ==============HOX2a_HOX2a                   --------- -----ZmHOX2a(1)                      --------->At4g35610         <---------AHL20(1)        <-------- ----->ANAC58                         <---------At4g35610 <---------ZAT14                <---------AHL20(2) ----->ANAC58   ---------->DOF2 <--------P --------->ZAT6 --------->ZAT14                --------->AHL20(2) ---P    <---------ARR14(2)<---------At4g35610 --------->ARR14(2) <---------AHL20(2)    --------->AHL20(2)   aggaaggacagtatatgacaaagaagctcatctggtagactgctaacacgatccatcctctgaactaatattttaaaacaaatggtgctatttaattatt  21787100 ------AHL20(1) ----->AHL20(2) ------AHL20(2) ---->AHL20(2) -----AHL20(2) ----YAB1 --AHL20(2)                                      <---------ANAC58 >HAHB4                                          <---------ANAC58 ->YAB1                             --------->ANAC58           <------NtERF2 --ICU4                             --------->TGA1a          <---------RAP2.6(2) >ATHB1                             <---------TGA1a          <---------ANAC46 -HAHB4               ========================bZIP_DOF       <---------ANAC58 ->ATHB51             ---------->DOF2          <---------ARR14(2) -ATHB51       <---------GLK1(2)    --------->ANAC58         <---------ANAC58<----------TaMYB80 >ICU4        --------->At4g35610   --------->ANAC46 <---------CCA1(2)      ---------->TaMYB80 -YAB1        <---------At4g35610 <---------AtLEC2 ------>ZmHOX2a(1)    <---------TOE2(3)   ---------   aaattttggatgtttcagcttctcaaaagcatttttgcacgtctgagagtttcctgtctcttggcgtctgtatcaaggtatataccgagttttctcatca  21787200                                                                                                  ---                                                                                                 <---                                                                                          ------>MYB46(1)                                                                                          ------>MYB83                                 ---------->DOF2                                 --------->WOX13(1)                            ----------->GT1                               ===========================                           <------ZmHOX2a(1)                     <------ZmHOX2a(1)    -------->P<---- >YAB1               <---------LBD16                  --------->ALFIN1    <------ZmHOX2a(1)     -----   tcttcaagctctgagttttatttttcggaggagtaaaaagggttgtctactctagggtttggctagaggatggataggattagcaatctaccaaatgaga  21787300                                   <---------At4g35610            <---------CCA1(2)      --------->At4g35610                         <-----------GT1          --------->TOE1(1)        <---------HSFB2a(1)                 --------->ARR14(2)       --------->bZIP60(2)         <---------ZAT2                      <---------GLK1(2) ------>ATHB12                     <---------HSFC1(2)                  <---------ARR14(2) ---ZmHOX2a(2)              ---------->DOF2         --------->ZAT14<------NtERF2 ===HOX2a_HOX2a      <----------DOF2    <----------DOF2          --------->ALFIN1<---------YAB1 -----ARR11(3) <---------ANAC58    --------->HSFC1(2)     ---------->DOF2    <----------DOF2 ---->ARR11(3) <---------ANAC58    --------->HSFB2a(1) <-----------HVH21--------->GLK1(2)   tcatttgccacatcgtatcgttcctttctgcaaaggaagctgctttcgcatcagttctgtcaaagaggtggcagaatctctttaccattgtacaaaaact  21787400                                                                             --------->LBD16                                                                            --------->ANAC46                                                                  --------->LBD16                                                                <---------LBD16                                                            <----------DOF2 --------->ANAC58                                                      --------->ARR14(2)    --------->ANAC58                                                   <---------ANAC58        <---------LBD16          -                                                   <---------ANAC58      -------->P     <---------ARR11(3)                    --------->GLK1(2)              <---------ANAC46<-----------HVH21    --------->ARR11(3)              --------->WRKY18(1)  <---------WOX13(1) <---------ARR14(2) --------->MYB52(1)      <---   tgagtttgatgactcagtcaagaatcaagggagtttgatggattttgtcaatggcgtattggctcttccggtcactacccgcattagtaagttctctcta  21787500                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                            <--------                                                    <-------MYC3                         --------->ALFIN1                     --------->ARR14(2)             ------->MYC3                       <---------ANAC58   <-----------GT1   <---------ARR14(2)          <---------ALFIN1                      <---------ANAC46  ----------->HVH21----------->GT1              <---------ZAT18  <---------MYB52(1)    <---------ANAC58 -------->CCA1(2)<---------LBD16         --------->ATHB12     --------->MYB46(3)  =================== ------TOE2(3)---------->DOF2           <---------YAB1     --------->ETT(2)       ------>ZmHOX2a(1)<-   agatttgacagttttttaaagcggaaacttgagactggtcttgttattggtccacatgttgtcaaccgttgtctctgtaatgtcctgaagcgtggtgtct  21787600  Previous    Next  AGI:  At3g58910.1    Description:  F-box family protein. Identical to Putative F-box protein At3g58910 [Arabidopsis Thaliana] (GB:Q9LXR1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G59000.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 21786283    to: 21787056    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g58920.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At3g58920 [Arabidopsis Thaliana] (GB:Q9LXR0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G58980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21787270    to: 21788965    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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