Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->MYB52(1)                                 ------->GAMYB                                <---------MYB111(1)                                <---------MYB52(2)                        --------->YAB1                      <-----------HVH21 ------>DAG2  ----------->HVH21 --------->MYB46(3)                        <---------RAP2.6(3) ------>DOF2--------->ZAT2      <---------MYB46(2)                        <------NtERF2 ->At4g35610<---------At4g35610 <---------MYB111(2)                      --------->RAP2.6(2)  ------- >ANAC58    <---------ZAT2     ------>MYB46(1)                      ---------->DOF2           ------- >ANAC58    --------->At4g35610------>MYB83                  --------->YAB1                 ---------   aaagtagcctctcaagctgaccactatcagaccaactaactgagtcaagagtgagagtcttaagcataggtaaggccgaaatgtgttcaggcccaaaagc  21780700                <---------ICU4                                                                 <----- --------->ANAC58                                                                            -------- --------->ANAC58                      <---------At4g35610                                 <------ZmHOX2a(2) --------->ANAC46                      --------->At4g35610                               --------->At4g35610 -->ANAC58     ------>ZmHOX2a(1)  --------->ZAT14                                  --------->AtLEC2 -->ANAC58    <---------MYB59     <---------ZAT14              <-------TEIL   <---------ARR14(2) ->DOF2 <---------ALFIN1         <---------ZAT6            ------->TEIL       --------->ARR14(2)   aatacgacatccacttcctaatttcagttcaactagtgttctgctcatgaaaatttcgatgaacatacatctatgtcccaaatccatggacagatcaatg  21780800                                              ------>ZmHOX2a(2)                                            --------->AGP1                 <---------ALFIN1           <---------ARR11(3)                <---------At4g35610         --------->ARR14(2)                                 ------               ----------->RAV1(1)          <---------AGP1                                     ------             <---------At4g35610            --------->ARR11(3)                       <---------YAB1        <---------ZAT14    --------->ARR14(2)--------->CCA1(2)                  <---------HSFB2a(1)        --------->ZAT14 --------->ANAC55(2) <-----------ARR10           <---------ANAC46       <-----       --------->DEAR3(1)  <---------ARR14(2)<------ZmHOX2a(2)          <---------ANAC58       <-----      --------->ANAC46  <---------ANAC55(2) <---------ARR14(2)    --------->ZAT6--------->HSFB2a(1) ----ATHB12  --------->At4g35610        <---------At4g35610     <-----------GT1<---------KAN4(2) ->WOX13(1)  --------->ZAT14     <---------ATHB12      <---------ALFIN1 <---------ANAC58      <------   agcaaaacaccgcgctgcagcacattacatatccactgattcagaagatctaaatcaacaccggttttacacttgagtgagaattttctgatgggagaat  21780900       --------->ANAC58       --------->ANAC58     ---------->DOF2  --------->ANAC58  --------->AtLEC2  --------->ANAC46  --------->ANAC58          --------->ARR11(3) --->ARR14(2)               <---------ARR11(3) --->GLK1(2)                --------->GLK1(2)                                               <------NtERF2 ------ARR10<---------ARR14(2)                                    <-----------GT1     ---------->DOF2 ----ARR14(2)           --------->ANAC46           <---------ANAC58                  ---------->DOF2 ---GLK1(2) --------->ARR14(2)    ---------->DOF2  <---------ANAC58              <-------TEIL   ctccatgcaaagccaatactctatccacaaaatctataaagctctgtcgagttccttcccttgtctgtttaccttcttctgggttcagaaaggcagagtc  21781000                                                                                  --------->ANAC58                     --------->ANAC58                                             --------->ANAC58                     --------->ANAC58      --------------------->WRI1    <----------DOF2         ----                   ---------->DOF2    ------>NtERF2                 --------->ATERF1(1)       <------              <----------ID1         --------->DEAR3(1)            --------->At4g35610  =============           --------->MYB52(1)        <---------ALFIN1              <---------ATERF1(1)  <------ZmHOX2a(1)          --------->CCA1(2)         --------->ATERF1(1)      ---------->DOF2    <--------P    -------   atcaaactcgagataagggacaaaagcaatgagatagcgccacctcttggagagaatagaagtcaaagcagcctcctttgtggtaagtaaggacaatata  21781100                                      --------->AtMYB61                                      <---------ALFIN1                                  --------->MYB46(3)         <------ZmHOX2a(2)       --------->CCA1(2)        <---------ARR11(3)       <------ZmHOX2a(2)        --------->ARR11(3)      <---------ARR14(2)       --------->GLK1(1)        --------->AGP1           <-------TEIL         ------------>CBF       <---------GLK1(1)        --------->ARR11(3)   <---------------AtSPL8  --------->ANAC58 ------->HVH21         --------->At4g35610   --------->ZAT14                 --------->ANAC46 ---ARR11(3)           <---------At4g35610   <---------ZAT14     --------->ZAT6 --------->WOX13(1) ===============HOX2a_HOX2a     <---------ARR11(3)   --------------->AtSPL8  --------->ANAC58    ---- -->AHL20(1)     <--------P     --------->ARR14(2)  ---------->DOF2        ------>ZmHOX2a(1) ------->TEIL   tgaccaaggagatcatctggtagactgctaacaagatccaccatctctgcagtagaaagtacatttaacacaaactcctaagcaatccgaacatgaacat  21781200                                           --------->ARR11(3)                                           <---------ARR11(3)                                           --------->GLK1(2)                                           <---------ARR14(3)                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <---------AGP1                                           -                                           --------->ARR14(3)                              --------->ANAC58                                         ----------->ARR10                                 --------->ANAC58                            ------>ZmHOX2a(2)                                         ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                                         <------ZmHOX2a(2)                          <---------ARR14(2)              <---------YAB1            --------->ARR11(3)                          <---------ARR11(3) ------>ZmHOX2a(2)                      <---------ARR14(2)       ---------->DOF2    --------->ARR11(3)--------->CCA1(2)                       <---------ARR11(3) ----->AHL20(2)           --------->ARR14(2)<------ZmHOX2a(2)      <----------DOF2  --------->ARR14(2)   aaattacaaaaaagaagttgcacttggggatcttatacagacgaagatctgtaaacactgatgcttaaactttgagtcaaattatagatccccaaggaaa  21781300                                                                                        <------MYB46(1)                                            <------NtERF2                               <------MYB83                                           --------->LBD16                            --------->ALFIN1                                         <---------HSFB2a(2)                          <--------P                                     --------->KAN4(2)                             <---------TOE2(3)                              --------->At4g35610            <-----------GT1    <---------WRKY12                           <---------At5g28300      <---------ALFIN1            <---------WRKY38(1)--           --------->ARR14(2) <---------At4g35610 ------>ZmHOX2a(1)      <-----------RAV1(2)    ----- ---------->GT1           <-----------GT1<---------LBD16    <---------AHL20(2)<-----------HVH21 -----   attagaaaatatgaattcgcttaggcatttaccgctgtacattcgcggagtcctacacatatttaacttgtagagacaggggtcaaaggttgggagggaa  21781400                                                                            <---------ANAC55(2)                                                         ----------->GT1    <---------ANAC55(1)                                                        --------->DAG2      --------->ANAC55(2)                                                 --------->LBD16            <---------ANAC58                                               <---------LBD16              <---------ANAC58           ---------->DOF2                    --------->MYB52(1)           --------------->AtSPL8       <----------ID1                        ----------->HVH21            <-----------GT1          -- -------->DOF2         <---------TOE1(3)    <-----------HVH21          <----------DOF2     <---------ANAC58 ---->ANAC58           <---------TOE2(3)  <------ZmHOX2a(1)   <---------AHL20(2)           <---------ANAC46 ---->ANAC58--------->DAG2       ---------->DOF2<---------ANAC46   <-----------GT1         <---------ANAC58   gcaaagaaggcgaaaaagtagatttagggtttgcccaaagtgaaggagtcacggagaaaaggttttaattttccttttacgtgcccctacatagcgtttt  21781500                                                                   --------->YAB1                                                                  --------->ICU4                                                                  <---------YAB1                                                                 <---------TOE2(3)                                                                --------->YAB1                                                              <---------WOX13(1)                                                            <---------ICU4                                                            --------->ATHB12                      <-------TEIL                         <---------YAB1                  <---------AHL20(2)                       --------->ICU4                 <---------AHL20(1)                    --------->ARR11(3)         ---------->DOF2                 --------->AHL20(2)                 --------->CCA1(2) --------->ATHB12                 <---------AHL20(2)                --------->ARR11(3)<---------YAB1             <---------YAB1                        <---------ARR11(3)--------->ICU4 -------->DOF2--------->YAB1         <---------At4g35610 --------->YAB1  --------->AHL20(2)   ataaagttttaagttataataaaattcgtttagaagtttagatgagataataagatatatcatgattgatgatgattaaaaaatcaaagctaaacacaaa  21781600  Previous    Next  AGI:  At3g58880.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At3g58880 [Arabidopsis Thaliana] (GB:Q9LXR4); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G59000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21779462    to: 21781144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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