Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->AHL20(2)                                                       <---------AHL20(2)                                        --------->AHL20(2)                                      --------->AHL20(2)<---------AHL20(2)                             <---------AHL20(2)  ----------->GT1       ------->TEIL       <---------AHL20(1)   ----------->GT1             <---------GLK1(1)    <---------YAB1        <---------ARR11(3)  <---------TOE2(3)            --------->GLK1(1) --------->ICU4           --------->AHL20(1)  --------->DAG2     --------->MYB52(1)                <-   taaattatgaacccgaactaaacagcaatatataaaaaaaaaaaatataaggtgaaaataaatgaaaaaacagagagaattccaaattgttttttttttt  21770500                                                        <----------DOF2                                                     <---------ARR11(3)                  <---------ARR11(3)                                        ------->GAMYB--------->ARR11(3)    --------->ANAC46            --------->GLK1(1)          --------->MYB46(3)                  --------->ANAC58 <-------- <---------YAB1                  --------->YAB1      <---------ARR11(1)    --------->ANAC58 --------- --------At4g35610       <---------MYB46(3)         <---------CCA1(2) ------->GAMYB      --------->ARR11(3)   cttctgattttcagaattctaaattgtttgttcaatcttcaacctccaaacttcatatcttttttctcacaacgctcaagaaacgtagtaagaactttaa  21770600                                                                               --------->HSFB2a(2)                                                                               <---------HSFB2a(2)                                                                               --------->LBD16                                                                              <---------LBD16                                                                              --------->HSFB2a(2)                                                                        <---------MYB52(1)                                                                        --------->ARR14(2)                                                                      <---------ANAC58               --------->ZAT14                                        <---------ANAC58        ----------->HVH21                                          --------->ARR14(2)      <---------At4g35610          --------->At4g35610       ------>NtERF2   <---------LBD16      --------->At4g35610          --------->ZAT2        --------->ETT(2)   ------>ZmHOX2a(1)     <---------AGP1           ------->TEIL               <---------ETT(2)   ========================= --DOF2------>ZmHOX2a(2)   ----------->GT1              <------NtERF2<-----------------------TaNAC69(2) >TOE2(3)      <---------ZAT14<-----------GT1   ---------->DOF2    <---------ARR14(2)   tggcattgatctgacattgcagagccaaaatgtaactagctgtctcttcgaacagcgcgtcgacaccaagttccgttcctccgggaactattgtctgaag  21770700                     ------>ZmHOX2a(1)               <---------ALFIN1             ------>ZmHOX2a(1)            --------->ANAC46      ==============HOX2a_HOX2a      ======================HOX2a_HOX2a      ------>ZmHOX2a(2)    --------->ARR14(2)                                                      --------->At4g35610    <-    <---------ARR14(2)                                                 <---------MYB52(1)          <-    <---------ARR11(3)                                        --------->ZAT6<---------At4g35610------    --------->ARR11(3)                             <---------DEAR3(2) <-------GAMYB            <----- ============HOX2a_HOX2a                       --------->ANAC46   --------->ANAC46 --------->GLK1(2)   cgcctcgatcttctcctccactccttcttcatcttcatcttcatcttctacgtcggtctcgcttacactcgccgttgcatcggacaatctctgtctggtt  21770800                                 <------NtERF2                               <---------DEAR3(1)                               <---------ANAC46                           <---------At5g28300        >>>>>>>>>>>>>>>>>LFY--------->ANAC46                  <------MYB83  <-------GAMYB            <---------LBD16                    <------MYB46(1) <---------MYB46(3)      <---------REM1(2)                   --------->MYB46(2)               <------ --------At4g35610       <---------ZAT14                     --------->MYB59<---------ANAC58 -------- --------LBD16    <---------ANAC58                          <---------MYB55(1)              --------- --->ARR14(2)     <---------ANAC58  <------ZmHOX2a(1)      <---------MYB52(1)         <-----------GT1 ----ARR14(2)--------->ALFIN1 <---------LBD16    <------ZmHOX2a(1)          <---------ANAC58---------   ctgcggttgaaaccagtggagcttgtgttcacggcggaggatggagacggaggagaagagcgtttggtatgggaagtggctagggttttctccattgacg  21770900                                                            ----------->GT1                                                            <---------ANAC46                              ---------->DOF2        <---------YAB1 ---LBD16             ---------->DOF2            --------->AHL20(2)                        ---------- ->MYB52(1)        *TSS    ----------->GT1       <---------AHL20(2)                    ----------->GT1 >WRKY12    <-----------RAV1(1)          <---------ANAC46 <---------ZAT14          <------ZmHOX2a(1)< -->HVH21   --------->ALFIN1  <---------ZAT14  <-----------TBP           <------------CBF  <---------DOF5.7(2)   gagggagagaagatgtgttggaagaaaaggagtaaagagacctgtgtgtatttatatgagtgatgtgaattagtagattgaagtaggaccggttaaagtc  21771000                                         --------->ATHB12                                         <---------ICU4                  ----------->GT1              <----------DOF2           --------->ICU4                <---------MYB52(1)           <-----------GT1              <---------ATHB12     --------->TOE2(3)     <-------TEIL                       <---------YAB1<---------At4g35610<------MYB46(1)    <---------MYB52(1)                 <---------TOE2(3)   ------->TEIL<---------MYB55(1)   <---------MYB52(1)                 --------->YAB1  --------->ZAT2<---------ANAC58  --------->LBD16                  <----------DOF2    --------->At4g35610<------MYB83 >DOF2--------->MYB52(2)     <---------ANAC58    <---------ICU4     <---------ANAC58 ---------LBD16              <---------ANAC58   --------->ICU4     <---------ZAT18<----------DOF2   attccggttcgttttactttggtttactcttgtttgcctttaatgatttgattatgagctgaatcttagtgcgtttggttaagactttagtttagtacta  21771100                --------->MYB59                <---------TOE2(3)                <---------TOE1(3)             <----------DOF2                                            --------->ZAT2      <---------MYB46(3)                                      --------->ANAC58    <-------GAMYB                                             --------->ANAC58                <------    <---------ANAC58                                       <---------MYB52(1)   <-----------RAV1(2)<-    <---------ANAC58               --------->YAB1         <---------RAP2.6(3)<---------PCF2 <--------   <---------MYB46(3)             <---------YAB1        <---------LBD16 <---------ZAT2     <---------  <---------AtMYB61       --------->ALFIN1      --------->MYB59      ---------->DOF2  <---------YAB1   tgttttggttgtgcgatttaggtttggggtttggctataattttggaaattgggtaatgccggtatgccatcaaagctgggtccagttgtgattttcttt  21771200                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                     --------->ALFIN1                                      --------->ANAC46                                     <---------ZAT6                                <---------WOX13(1)                                   <---------ANAC46                              --------->ATHB12  <-                           <---------ANAC46                           --------->GLK1(2)  <---------ANAC55(2)                           <---------ANAC55(2)            <---------AHL20(2)    <---------YAB1<------             <---------ANAC58      <---------ANAC58      <---------AHL20(2)   ------>ZmHOX2a(2) <----             <---------ANAC46<-----------RAV1(1)  <------MYB46(1)    <---------ARR11(3)  --------->ANAC58 ----DOF2    <---------ANAC58--------->ALFIN1     <---------MYB46(3) <---------GLK1(2)   --------->ANAC58 ---------DOF2             --------->ANAC55(2)    <------MYB83       --------->ARR11(3)  --------->ANAC55(2) ----------------ANAC81    <---------ANAC55(1)<-----------RAV1(1)   <---------RVE1(1)<-----------HVH21 --GT1   --------------------->WRI1<---------ANAC58      --------->AHL20(2) <---------ARR14(2)=======   tctttttttgttcttgagtgtttcgaattatgtgttggagtgtttgttttgttggtttatttattaagagagattttggatcgtgattgtcacgcgctat  21771300                        <---------ZAT14                        --------->ZAT14                       <----------DOF2                  <-----------TGA1                  <-----------HVH21                 =================bZIP_DOF                 <---------ANAC55(2)                 --------->ANAC55(2)                 --------->ANAC46                 --------->ANAC58                 --------->ANAC58                 <---------TGA2(1)       ----------->RAV1(2)                 --------->bZIP60(2)  ====================HOX2a_HOX2a                 <---------TGA1a      ------>ZmHOX2a(2)                 --------->TGA1a     --------->GLK1(1)                 --------->O2       <-----------ARR10   <---------AtMYB61   <---------DAG2<---------GLK1(1) <---------ANAC46<---------O2       <---------AGP1 ----------->HVH21 <---------ANAC58--------->TGA2(1)  --------->ARR11(3) <---------ANAC58--------->bZIP60(1)<---------ARR14(2)                           ---------->ID1 --------ANAC46  <---------bZIP60(1)--------->ARR14(2)                     <---------AHL20(2) ----DOF2<---------ANAC46           <---------ARR11(3)                   <----------DOF2 -------RAV1(1) <-----------STF1 --------->ALFIN1  ------>ZmHOX2a(1)  ------->TEIL <----------DOF2--- ==========================bZIP_DOF<---------CCA1(2) <<<<<<<GRF7     <---------CCA1(2)     --------->ZAT6   gttgtgtggtttagtggagacgtcactttactcaagtggatctccctgaggtcctgacagatagatagattgtatctttatttgtcttttaaaacactat  21771400  Previous    Next  AGI:  At3g58850.1    Description:  PAR2 (PHY RAPIDLY REGULATED 2); transcription regulator. similar to HLH1/PAR1 (PHY RAPIDLY REGULATED 1), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G42870.1); similar to unknown [Populus trichocarpa] (GB:ABK92726.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 21770329    to: 21770919    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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