Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->HSFB2a(1)           --------->HSFC1(2)      --------->HSFB2a(2)      <---------HSFB2a(2)   <---------ARR11(3)   --------->ARR11(3)  <---------ICU4 ------>ATHB1 ------->YAB1 -------HAHB4                                                                              ---------- --------ICU4                                                               --------->HSFC1(2) ------>ICU4                                                                --------->HSFB2a(1) -------ATHB12                                                              <---------HSFC1(2) ---->WOX13(1)    --------->AtLEC2                                          <---------HSFB2a(1) -->MYB46(3)  <------ZmHOX2a(2)      <-----------GT1                       ------->TEIL   --------->YAB1 ->ANAC58  <---------HSFB2a(1)    <---------GLK1(2)                   <XXXXXXXXXXXXXXXXXXXXMIR779.2 ->ANAC46 --------->SPL7      <---------At4g35610               ---------->DOF2     <---------WOX13(1) ->ANAC58 <---------TOE1(2)<-------TEIL                        --------->YAB1    <---------YAB1    --   atcattatctcgaacgatccatacagagattcatcagattatccattttttgttcccagattgaatcaaagtctacgaattttctaattgaatcaaagtc  21730600                                                       ------>MYB83                                                       ------>MYB46(1)                                                     <---------MYB59                           ------                      <---------HSFB2a(2)            <---------MYB111(1)                      <------                      --------->HSFB2a(2)           --------->ANAC58                          -------             --------->ARR11(3)                     --------->ANAC46                ----------->GT1--             <---------ARR11(3)                     --------->ANAC55(1)            --------->MYB59 --        ==============HOX2a_HOX2a                   --------->ANAC58              <-----------RAV1(2)        <------ZmHOX2a(1)                      --------->ZAT14                   <---------MYB52(1)--   <----------DOF2   <---------LBD16       --------->ANAC46                     <-----------HVH21<--- >DOF2<---------TOE2(3)--------->LBD16  <------ZmHOX2a(2)                    <---------At4g35610<---- ------->ANAC46------>ZmHOX2a(2)       <---------ARR11(3)<---------ATHB12    --------->At4g35610<----   tacgactttaggatagatcgtttcccagaagatgaaatctagatcacagaacacacctaatcaattggactcagaattgagcagtcaggttatatggata  21730700 --->CCA1(2) ---ARR14(2) -->ARR14(2) ------->ANAC58 ------->ANAC58                          --------->MYB52(1)                                 --------- ------->ANAC46     <-------TEIL   <---------MYB59                           --------->TOE1(2) ------ALFIN1     <---------ARR14(2) ------>MYB46(1)         --------->CCA1(2)             --------->DAG2 -----REM1(2)     --------->ARR14(2) ------>MYB83         ----------->ARR10 ----------->RAV1(2)     - ---TEIL    --------->ANAC46     >>>>>>>>>>MYB80  ---------->DOF2   <---------WOX13(1)   ---------->DOF2   cacgcctaaatttcccaccagattcaattgtttcaaaccaaactaagagaagaaaagagtgagatttgggattgacatacctgggcctctcaaaaggtga  21730800                                               ---------->DOF2                                   <---         --------->AHL20(2)            ---------->DOF2                                        <------       --------->ANAC58            --------->ANAC58        <------ZmHOX2a(1)                  -------       ----------->GT1             <----------ID1       --------->CCA1(2)        <---------AHL20(2) -->GT1--------->ANAC58            --------->ANAC58   --------->CCA1(2)         --------->AHL20(2) -------->TOE2(3)                 ------------------------>ANAC81   --------->YAB1            -------   attcttaacaagtaaatcactgaaattagattggaagaagccaaagagagaaagagagataggaagacaatgaaaattgatattaattcagaactgtcga  21730900               --------->ARR14(2)                                          --------->At5g28300            ------>ZmHOX2a(2)                                             ------->GAMYB          --------->ARR11(3)                                              --------->TOE2(3)          <---------ARR14(2)                                              --------->TOE1(3)   <--------P  <---------ARR14(2)                                         ----------->GT1 ----------->GT1           <---------DEAR3(1)                           <---------At5g28300 --------RAV1(2)        --------->O2                        <------------CBF        --------->DAG2 ---ETT(2)<---------ARR11(3)                  ---------->DOF2          <-----------GT1 ---->HVH21<------ZmHOX2a(2)        ------>ZmHOX2a(2)    *TSS   ----------->GT1    ---------->DOF2 -->ETT(2)--------->ARR14(2)    ----------->HVH21  --------->CCA1(2)   --------->MYB52(1)         <--   caggggtaagaagatcgtattcgacctcgtcgctgtgatcgtggagaagaaagaaatgggctaattgtgtaattaaccgtaaatataaagggcttatttt  21731000                                            <---------MYB59                                           --------->ATERF1(1)                                         --------->TCP15(1)                                         <---------PCF2                                        <------NtERF2                               <---------ANAC55(2)                  --------->ARR14(2)    --------->ATERF1(1)                  <---------ARR14(2)   <---------MYB46(3)               <---------ANAC55(1)    --------->ALFIN1               <---------ANAC46--------->ANAC55(2)               <---------ANAC55(2) <---------AtMYB61               --------->ANAC55(2) <-----------RAV1(1)                                          -----         <---------AHL20(2)    --------->ANAC58    <---------ANAC58                           -------         --------->AHL20(2)    --------->ANAC55(1) <---------ANAC58                        <---------LBD16     <---------AHL20(2)        --------->ANAC58    <---------ANAC46                 <----------DOF2     --------->AHL20(2)<---------At4g35610--------->PCF2    <---------CCA1(2)   <---------ANAC58<----     --------->AHL20(1)--------->At4g35610------>NtERF2   ------>ZmHOX2a(1)     <---------ANAC58<---- ---------GT1 <-------TEIL     <---------ANAC46 <----------DOF2              <----------DOF2<--------   ttacaaataaaataaatacgtatacagctcatcacgtatggtggggcctactttcgtgtcctaaatctgagacccatcactttcgtctttagacgcggtg  21731100     <---------ARR11(3)     --------->ARR11(3)    <---------CCA1(2) ---->ZAT14 -->At5g28300             <---------ANAC58                                             <---------ARR11(3) -----ZAT14               <---------ANAC58                                             --------->ARR11(3) -----ZAT18     <---------YAB1                         <-------TEIL           <---------LBD16 -DEAR3(1)<---------TOE1(2)    <------ZmHOX2a(1)------>NtERF2 <-----------GT1<---------LBD16   aactatatatctcacgttcttatttagtgcttaggacaaaaacaaaactcggccaaatacattttttcatttccaagtttcagggatgaaatcttgttgt  21731200                                                                                    <-------GAMYB                                                                                   <---------MYB46(3)                                                                                <------MYB83                                                                                <------MYB46(1)                                                                           --------->ATHB12   -------                                                                          <---------YAB1      <------                                                                        --------->CCA1(2)    <-------                                                                       <---------ARR14(2)    --------                                                                       --------->ARR14(2)    <-------                    ----------->GT1                               ---------->DOF2  --------->MYB55(2)                   <------ZmHOX2a(1)                        --------->AHL20(2) <---------AtMYB61                 <---------ANAC46                    ----------->HVH21<------ZmHOX2a(1)      <-------            --------->ATHB12             --------->ZAT6     <---------AHL20(2) --------->MYB111(1)  -   atagagtttccaaatggttgaggagaaaataatctctcattcaacactatattgtatgacatttttttaaaaggatatgatttggtggttaactaattat  21731300                                                                                       <---------HSFC1(2)                                                                                       <---------HSFB2a(1)                                                                                       --------->HSFB2a(1)                                                                                       --------->HSFC1(2)                                                                                  --------->HSFB2a(2)                                                                           ------>ZmHOX2a(2)                                                                           =========================HOX2a_HOX2a                                                                          ==========================HOX2a_HOX2a                                                                          <------ZmHOX2a(2)                                                                         <-----------ARR10                                     --------->ANAC58                    <---------ARR14(2)   <---------ATHB12                ---------->DOF2                       <---------ARR14(3) ->HAHB4                  --------->TOE2(3)                              --------->ARR11(3) ---ICU4                --------->GLK1(2)                                --------->ARR14(3)         - --ATHB51               <---------ARR11(3)                               --------->ARR14(2)        -- ->ICU4                 --------->ARR11(3)                         --------->YAB1 <---------HSFB2a(2) --YAB1                --------->RVE1(1)                 ---------->DOF2 <---------ARR11(3)  ------>ZmHOX2a(1) --ATHB12              --------->CCA1(1)    ----------->GT1     --------->YAB1 <----------DOF2    --- -------->LBD16   <---------AHL20(2) --------->ANAC58<-----------GT1   ----------->ARR10<----------DOF2   tccgaatcaatgtgtgatatataaaaaatcttagaactaaagcaatgtgttatattaactaaagaagaataagaagatcttcttttagaactttcctcac  21731400                                                   <---------AHL20(2)                                                   <---------ICU4                                                   --------->YAB1                                                   --------->ATHB12                                                   -------->ATHB1                                                   -------->HAHB4                                                   <--------HAHB4                                                   --------->ATHB51                                                  <---------ATHB51            --------->WOX13(1)                    --------->ICU4                          --------->CCA1(2)         <---------ARR11(3)                    --------->AHL20(2)                        --------->ARR11(3)         --------->ARR11(3)                 ------>MYB46(1)                     --------->ZAT14 -------->DAG2         --------->MYB59      ------>MYB83                   --------->MYB46(3) -------->DOF2   ---------->DOF2     ------>ZmHOX2a(1)             <---------YAB1        <---------ARR11(3) ------->DOF2  --------->YAB1     <-----------GT1 <---------YAB1--------->ICU4  <---------ZAT14   aaaaggcacaatatctatcaaaagttatgtcttaatttcctataccaacttaattattagatggaattgattatagaaccactatacttaagatatgttt  21731500  Previous    Next  AGI:  At3g58730.1    Description:  (VACUOLAR ATP SYNTHASE SUBUNIT D); ATPase, coupled to transmembrane movement of substances / hydrogen ion transporting ATPase, rotational mechanism. Identical to Vacuolar proton pump subunit D (VATD) [Arabidopsis Thaliana] (GB:Q9XGM1;GB:Q9LXS8); similar to unnamed protein product [Vitis vinifera] (GB:CAO69953.1); contains InterPro domain ATPase, V1/A1 complex, subunit D; (InterPro:IPR002699) Range:  from: 21729234    to: 21730957    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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