Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                <----                                                                                                <----                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                             --------------->AGL15                                                                             <---------------AGL15                                                                            <-----------------AGL1                                                                       <---------ZAT14      ---------                                                                       --------->ZAT14   --------->ARR14(2)             ---------->DOF2                                    <---------At4g35610      <---------ARR14(2)           --------->ANAC58                                     --------->ZAT2--------->TOE2(3) -----           --------->ANAC58                                     --------->At4g35610     <---------At4g35610           --------->ANAC46                                    --------->GLK1(2)        --------->At4g35610 -----ZmHOX2a(1)                                           --------->YAB1   ----------------->AGL2 <-   aggacaatactctacgaaagaagttgttcaagttgcagcaatagcagcaatgtgtgttcaagcagaagctgactacagacccttaatggcagatgtggtg  21722100                                      ---------->DOF2                                 --------->ZAT2                                 <---------At4g35610 ---->ZAT14                      --------->At4g35610                                              --- -----ZAT14                  <-----------HVH21                                                    --- -----ZAT18                 <------MYB83                                                         ---- --ANAC46                   <------MYB46(1)                         <---------ANAC58            ----- ---RAV1(1)                --------->SPL7                      <----------DOF2              --------- -AtMYB61                 <---------MYB52(1)        --------->At4g35610                    <---------ANAC46 >ALFIN1             <---------ARR14(2)             <---------At4g35610                   <---------LBD16 ---->ZAT18 <---------MYB52(1)   <---------ZAT2   <---------RAP2.3(3)              ------>ZmHOX2a(1) ----------HVH21<---------ZAT6 <---------WRKY12 <---------MYB46(3)  <---------ANAC58  --------->ZAT6   cagtcactggttccattagtgagaaaccgtaggtcagcttcaaagcttagtggctgctctagtagctttagcttggctcggtctcctaactctccgggta  21722200    --------->YAB1            --------->YAB1  --------->ANAC58           <---------ATHB12                     ------->GAMYB  --------->ANAC58       <---------ATHB12                        <------------MYB.PH3(1) ------>ANAC58         --------->WOX13(1)                      <-----------GT1 ------>ANAC58        <---------AHL20(2)            <----------DOF2     <-----------GT1 ----->DAG2          --------->AHL20(2)--------->ANAC58     --------->ANAC55(2)         --------->YAB1 ----->DOF2      <---------ATHB12      --------->ANAC58     <---------ANAC55(2)        --------->ICU4 >LBD16  <---------GLK1(2) --------->WOX13(1) --------->ALFIN1 --------->MYB52(1)      <---------ATHB12   aagcaagcataggttctcaatgaataaatcaatcagagaagacgaaatgtgaggcttttattatgtaacggtatttactaaaacagacaatgatgtaaac  21722300                                                                                     ------>ZmHOX2a(1)                                                                                     ----------->HVH21                                            <---------DAG2                         ----------->RAV1(2)                                            <----------DOF2                        <---------ICU4                                <---------ICU4      <---------ARR11(1)             --------->YAB1                                --------->YAB1      ------->TEIL                  <---------ATHB12                               --------->ICU4      <---------GLK1(2)             <---------ARR14(2)  <---------ANAC58         --------->ARR11(3)      <---------CCA1(2)             --------->ARR14(2)  <---------ANAC58       <---------ZAT6  <-----------GT1               --------->ATHB12   acttgagtgatcaaacatggagtcatagagataatcatcaaataaactttttcgaatctctatgggctactagttattgggccaatcctgacccattact  21722400                                                        ------->MYC3                                                        <-------MYC2                                                        <-------MYC3                                                        --------->TOE1(2)                                                        ------->MYC2                                               --------->ALFIN1                                              <-----------HVH21                                              ------->MYC3                                              <-------MYC3                                             ====================bZIP_bZIP                                             <---------TGA1a                                             <---------O2                                             <---------ANAC58                                             --------->O2--------->ALFIN1                                             --------->ANAC55(2)                                             <---------ANAC58                                             <---------ANAC46                                             <---------ANAC55(2)                                             --------->TGA1a  <----------DOF2                                             <---------bZIP60(1)                                             ============================bZIP_DOF                                             ============================bZIP_DOF          --------->ICU4                                           ------------->DYT1<---------ANAC58          <-----------TGA1                                         <-----------HVH21   <---------ANAC58    <-------TEIL                   --------->ARR11(3)  --------->DAG2  <---------TGA1a         --------->ZAT18                   <---------ARR11(3)============================bZIP_DOF     ----------->GT1  ------                  --------->YAB1     ---------->DOF2   ==================bZIP_DOF------------>CBF         --------->CCA1(2)           ==================bZIP_DOF        ---------->DOF2--------->YAB1   atattctacagagacgagaatgatattagttcatgagaaaaaaggtcacgtgagggaacgtgggcttgatggagaaaggagggtacaatcgtcattttga  21722500                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                        <-------TEIL                                                                          --------->ARR14(2)                                                                         <---------MYB52(1)             <---------ANAC58                                      <---------At4g35610--------->ARR14(2)             <---------ANAC58                                    --------->REM1(1)    <---------ARR14(2)             <---------ANAC46           *TSS----------->GT1    <----------DOF2        <---------GLK1(2)  ----------->GT1                  --------->YAB1          <---------RAP2.6(2)  <----------DOF2     < --------->AtSPL8           ----------->GT1<---------TOE2(3) ------>NtERF2<---------ARR14(2)       --   gtactcgtaaaatttgcttagaaccctagaaggctaattagaactagggtttatatagtttgccgcttcatctccgtttcttctttccgattcgtgtttt  21722600            --------->CCA1(2)           --------->ARR11(3)           <---------ARR11(3)        <------NtERF2       <------NtERF2       --------->LBD16     <---------LBD16    <------NtERF2   <---------SPL7   ------>NtERF2   <---------DEAR3(2)  <---------DEAR3(1)   --------->TOE2(3)         --------->ZAT14       --------->ANAC55(2) --------->ATERF1(1)   --------->TOE1(3)        <---------MYB52(1)   <-----------GT1 -----------HVH21      ------->GAMYB     <-----------HVH21   <----------DOF2                    ----- ------->ANAC46      -------->P        --------->SPL7   ------>ZmHOX2a(1)       <---------TOE2(3)   cccgtcggccggagatatatcgcaaccctaatccgaaatggtccgtcgcagttaactcctcttctttggtttcacgttttttgatgtttcaaatagagat  21722700                              <---------DEAR3(1)                             --------->ATERF1(1)                            --------->ZAT2                       <-----------RAV1(2)                                  <---------ZAT2        <--               <-------GAMYB <------NtERF2                                 --------->GLK1(2)      <--              <---------MYB46(3)<------NtERF2                         <---------ZAT18             <--             <---------TOE2(3)<---------ANAC46                        --------->ZAT18            <---        <---------AHL20(2)  <-----------HVH21           <---------------AtSPL8                   <---       <---------AHL20(1)  <---------ANAC58           <---------ATHB12--------->ZAT14           <----       --------->AHL20(1)  <---------DEAR3(1)    --------->ANAC58     <---------ZAT14    <---------ARR11(3) <---------YAB1XXXXXXXXXXXXXXXXXXXX>MIR869.1     --------->ANAC58---------->DOF2         --------->ARR11(3) ---->CCA1(2)<---------YAB1<---------ANAC58      <-----------------AGL1  <---------At4g35610   <-----   ttgatgatatatattttggttgaattcaggcgtcggagaagaagctatcgaacccaatgagggacattaaagtgcagaagctggttctcaacatctccgt  21722800            <------ZmHOX2a(2)           <---------ARR14(2)           --------->ARR11(3)           --------->ARR14(2)      --------->ALFIN1                   <---------DAG2 ----MYB46(1)------>ZmHOX2a(2)        <-----------GT1 ----MYB83 <---------ARR11(3)   <---------TOE2(2) -------MYB46(3)                <---------TOE2(3) ------AtMYB61          --------->ARR14(2) ------MYB46(3)         <---------ARR14(2)            <---------MYB52(1)                        ----- -----MYB52(1)      ----------->RAV1(2)  <----------DOF2                         <---------ANAC46 --GAMYB  <---------GLK1(1)     <---------TOE1(2)<-----------GT1           -------->P           <----   tggtgagagtggagatcgtctcaccagagcctccaaggtttcacttttttttatctgttttgtctggttttcatatcaaccctgtgtgtatgctcgattt  21722900                             --------->ALFIN1                           <------MYB46(1)                           <------MYB83                          --------->MYB46(2)                          --------->MYB55(2)                          --------->MYB111(1)                          <---------MYB46(3)             ------>ZmHOX2a(1)                          --------->MYB111(2)  <-----------HVH21                          <---------AtMYB61<---------ANAC58                         <--------P        <---------ANAC46 ---->AHL20(2)           <---------MYB55(1)<---------ANAC58               ----------->GT1 -----AHL20(2) --------->HSFB2a(2)        --------->ATHB12              <--------P   taatggaattagttcttcgataacttggtaggtgttggaacaattgagtggtcagactcctgttttctccaagggtaagttattttctaagttgtatcaa  21723000  Previous    Next  AGI:  At3g58690.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G54820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69890.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 21720147    to: 21722358    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g58700.1    Description:  60S ribosomal protein L11 (RPL11B). Identical to 60S ribosomal protein L11-2 (RPL11D) [Arabidopsis Thaliana] (GB:P42794;GB:P42796;GB:Q42195;GB:Q8LD47;GB:Q9LXT1); similar to 60S ribosomal protein L11 (RPL11D) [Arabidopsis thaliana] (TAIR:AT5G45775.2); similar to RPL16A (ribosomal protein large subunit 16A), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT2G42740.1); similar to RPL16B (ribosomal protein L16B), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT4G18730.1); similar to unknown [Picea sitchensis] (GB:ABK22492.1); similar to ribosomal protein RL5 [Cicer arietinum] (GB:CAD56220.1); contains InterPro Range:  from: 21722540    to: 21723932    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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