Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->TOE2(3)       --------------->AGL15       <---------MYB59      <-----------------AGL1      ----------------->AG      ----------------->AGL1    ---------->DOF2      ===============================MADS_MADS     -------->P           ---------->DOF2   <---------MYB111(2)   <---------ATHB12               <---------TOE2(3)  <---------ZAT2     =====================================MADS_MADS  --------->At4g35610<---------------AGL15              --------->MYB59  <---------At4g35610--------------->AGL15   <------ZmHOX2a(1)<-------GAMYB  --------->ZAT2    --------->ANAC46       --------->LBD16   ----------->GT1 ------->ZAT14      --------->ANAC58      <---------LBD16 <-----------HVH21 --------ZAT14      --------->ANAC58      --------------->AGL15<---------MYB52(1) --------->YAB1   ctgcagctacctaaatgggctcactcaatgaagcaaaagtattgccaggaatagaatttaggtcagttattttgcaaaactgaatcatatatcgaattga  21716700                          <---------ARR14(2)                     --------->ANAC58                     --------->ANAC58            <---------ZAT2<---------GLK1(2)               ----------->GT1            <---------At4g35610                        --------->ANAC46            --------->At4g35610       --------->ATHB12 --------->ANAC58            --------->ZAT2--------->ARR14(2)           --------->ANAC58      --------->MYB52(1)<-----   attgaattgaattgagctgtgcccagcaaattctctcaattcattgaagaatattacaagcagaaaaaaaaaaaaaaaaaaacgatttgaaaacatactg  21716800                       <---------REM1(1)             --------->ATHB12            <---------YAB1                                         <------ZmHOX2a(1)            --------->ICU4                         --------->At4g35610          --------->YAB1     <XXXXXXXXXXXXXXXXXXXXMIR838        <-----------RAV1(2)         --------->ICU4<-----------RAV1(1)         <---------At4g35610 ----HSFB2a(2)         <---------MYB46(3)>>>>>>>>>TBF1      ---------->DOF2   gaacaagagaaatgatgatttggagttgttgcagcaagtagaagaagaagagcagctaaactagaagcaggagtgctacagagaagagaagagaagagaa  21716900                                                                                <---------O2                                                                               <------NtERF2                                                                              ------>NtERF2                                                                             ----------->HVH21                                                                             --------->DEAR3(1)                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                         ----------->GT1--------->ARR14(2)                                                     --------->At4g35610--------->MYB52(1)                                                --------->HSFB2a(2)     <---------ARR14(2)                                                <---------HSFB2a(2) --------->LBD16        ------->TEIL                                            <----------DOF2     --------->GLK1(2)   <------ZmHOX2a(1)  --------->HSFC1(2)    ---------->DOF2  <---------ARR11(3)    <---------GLK1(1)<---------ANAC46  <---------HSFC1(2)--------->AHL20(2)   --------->ARR11(3)----------->GT1   <---------DEAR3(1)   <--   gggaagtttcaatttcaatagattaaaaaagagaagagtgagagacctttcgagcagaagagtgaaaatccgaagaacggcgacgaggagatgtatcgga  21717000                                                 --------->ARR11(3)                                                <------------------------ANAC81                                            --------->GLK1(2)                                           <---------GLK1(2)       <----------DOF2                                        --------->YAB1   <----------DOF2                                    ======================HOX2a_HOX2a    <----------DOF2                                    <------ZmHOX2a(1)   *TSS   ---------->ID1     ----------->GT1      <---------ATHB12           =========================HOX2a_HOX2a   <---------ANAC58     <------- ----ZmHOX2a(1) ----------->GT1  <------ZmHOX2a(1) ------>ZmHOX2a(2)    <---------ANAC58    <--------   ggaaaccgatgatggaaatggttttttagtcggaaggaggaatcagaatttgatctcttctttttgtttcttttgctttgtgagtcgtttaaaaacgtca  21717100                                                    <----------DOF2                                                    <---------DAG2                                               <----------DOF2                      --------->AHL20(2)                                           ------->GAMYB               <---------ICU4                                ------------>CBF   <---------ANAC58   <---------ATHB51                    <---------DAG2        --------->MYB46(3)          --------->AHL20(2) ----HVH21          <----------DOF2      -------->P<---------ANAC58   <---------AHL20(2)   <------ZmHOX2a(1) --ID1          <---------MYB52(1)      <-----------GT1           --------->AHL20(2)<---------AHL20(2)   agtctcactctctctccccttacttttcaaattagtcaatttcaaccccctttgctttttaagctcgaataaataattccacctatttttttaggacgag  21717200                                                                                                   <-                                                                                                 <---                                <---------------AtSPL8                                       --------                                --------------->AtSPL8                                       <-------                          ------>MYB46(1)                                                   <--------                  --------------->AtSPL8                       --------->GLK1(2)            <--------                  <---------------AtSPL8            <-------TEIL                            ---------          <----------DOF2 ------>MYB83     <---------ANAC46   <---------ARR14(2)       --------->At5g28300          <---------DAG2<---------MYB111(1)<---------ANAC58   --------->ARR14(2)      ----------->GT1 --------->MYB52(1)     <---------MYB59    <---------ANAC58   <---------GLK1(2) --------->YAB1  -----   aacaaactgcaacttttttggtagtaccaacttactagtacaatttcgtatacattcattctcagattctcttgctaagttataagaatggtaaattatt  21717300         <-----------GT1     <---------YAB1 --------TOE2(3)                                                                          <---------YAB1 ------AHL20(2)                                                                         ----------->GT1 ->AHL20(2)                                                                            <---------TOE2(3) --AHL20(2)                                                                            <---------YAB1 -AHL20(1)                                                                             <---------TOE1(3) -AHL20(2)                                  <---------AHL20(2)                <---------ARR11(3) >AHL20(2)                      --------->MYB52(1)                            --------->ARR11(3)   <- ---->AHL20(2)                --------->ARR11(3)                              <---------GLK1(2)  <---   taatgtgatttttgctatttgtgaaaatagaagataacgagcttattttaaaaaacaaaaaaaaaactataaacttcaaagattttgctatggttattag  21717400                           <---------ARR11(3)                     <---------YAB1                    --------->AHL20(2)                    <---------AHL20(2)                   --------->YAB1                <---------AHL20(2)           <---------AHL20(1)                                                                       <           <---------AHL20(2)                                                           <---------AHL20(2)           --------->AHL20(2)                                                ----------->GT1     ----           --------->AHL20(1)  <---------YAB1                                --------->ANAC58 -------        --------->AHL20(2) <---------GLK1(2)                          --------->ANAC46  --------->AHL20(2)        <---------AHL20(2) --------->ARR11(3)                   --------->GLK1(1)   --------->AHL20(2) <---------YAB1--------->AHL20(2)                               <---------GLK1(1)   <---------AHL20(2) --------ICU4--------->TOE2(3)<-----------GT1------->TEIL     --------->ATHB12     <---------AHL20(2) ------GLK1(2) <---------AHL20(2)          <-------TEIL    --------->YAB1    --------->ANAC58<-------   attatgacattaaaatattaattttaatagattttcattctaaaatgcatctagatttcaatattgatttccaagtagcaagaaaattatttaaaatcat  21717500              --------->YAB1              --------->TOE2(3)          --------->AHL20(2)      --------->AHL20(2)      <---------AHL20(2)      --------->AHL20(1)     --------->AHL20(2)                                                        ----------->GT1     <---------AHL20(2)                                             --------->MYB52(1)         ------ --------->AHL20(2)                                                ----------->HVH21      <---------AHL20(2) ---------AHL20(2)        <---------AHL20(2)                       ------->GAMYB         <---------AHL20(2) ------->GT1  --------->TOE1(3)                                  <---------At4g35610     --------->AHL20(2) -->YAB1  <---------AHL20(2)    <---------AHL20(2)               --------->At4g35610    --------->YAB1 --YAB1  --------->AHL20(2)     --------->AHL20(2)             --------->REM1(1)    <---------YAB1   agttaaattaaattaatcttaatttgatttaaaattaaaaaaactcaaaattaagttgtcaaactacaactgactgccacaaggttataattttaattta  21717600  Previous    Next  AGI:  At3g58670.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48045.1); contains InterPro domain Protein of unknown function DUF1637 (InterPro:IPR012864) Range:  from: 21714367    to: 21717056    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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