Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                               <-----                                                                                       --------->ANAC46                                                                                     --------->ZAT6               --------->LBD16                                                     <-----------GT1  -              <---------LBD16                                                 <---------MYB52(1)<----             <------NtERF2                                 <<<<<<<<<TBF1     --------->LBD16   <-----             <---------LBD16                     --------------->AtSPL8    ------>ZmHOX2a(2)   <-----            --------->MYB52(1)                  <----------DOF2           <------ZmHOX2a(2)    <-----     <---------REM1(1)                     --------->HSFB2a(2)           <---------ARR14(2)  <------- --ID1    <---------ABI4(2) --------->LBD16<---------HSFB2a(2)           --------->ARR14(2)------->TEIL   agggctgatgtaggcaccgggattggattccgaaaccctagccttctcgactttgtacttcttcttcagagtatcgatccggtttttacactgaacgtcg  21696500                         --------->ARR14(2)                         <---------ARR14(2)                      <---------ANAC46                     --------->ATERF1(1)                     --------->RAP2.3(1)                     <------NtERF2                     <---------LBD16                     --------->At4g35610                     <---------At4g35610                    <---------RAP2.6(1)                    <---------ATERF1(1)                    <---------RRTF1(1)                    <---------ERF1                    <---------ORA47(2)                   <---------ATERF1(2)                   <---------RRTF1(2)                   <---------RRTF1(3)        <---------DEAR3(1)       --------->At4g35610       <---------At4g35610<---------DOF5.7(2)     <---------RAP2.6(2)<------NtERF2   --------->CCA1(2)<---------RAP2.3(1)  <---------ARR14(2)------>NtERF2  <---------SPL7   <---------DREB2C(2)                                  ------>NtERF2 -----MYB46(3)     <---------RAP2.3(3)                            --------->DOF5.7(2) ----DEAR3(1)      --------->ATERF1(2)                     <---------DOF5.7(2) ---------->ARR10  <---------RAP2.6(2)                     --------->MYB52(1) -----DEAR3(2)     <---------RAP2.3(2)                   --------->DOF5.7(2) ----DREB2C(2)     <---------DEAR3(1)                  <---------MYB46(3) ----At1g77200     <---------ANAC46             ----------->HVH21 <---------MYB52(1) ----DEAR4(1)     <---------LBD16          <---------REM1(1)  ------->GAMYB                  <------- ----HVH21<------NtERF2--------->LBD16  --------->ALFIN1<-------GAMYB  <---------ALFIN1   -----------   gtgcgatacggctgcgatttggcggcggaaacgtttcgaccggtgttgtagtgacggtcgttaacggcgttagccacctcttgccagtgtttctgacgga  21696600                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                  --------->ANAC46                                                           --------               <---------WRKY38(1)                                                           <-------               <---------WRKY12                                                              <------NtERF2               --------->ETT(2)                                                              --------               <---------ETT(2)                                                             <--------               <---------DEAR3(1)                                                           <--------       ----------->RAV1(2)                                                                  ------>NtERF2       --------->At4g35610                    <---------ANAC58                      ---------->DOF2 <       <---------At4g35610                    <---------ANAC58             <---------ICU4  <---------DEAR3(1)       --------->ZAT2               <---------ANAC46                 --------->ANAC58      --------->DEAR3(1)     <---------DEAR3(1)             <---------ANAC58          ------>ZmHOX2a(1) --------->ANAC46<---- --ANAC46  <---------AtMYB61        <---------ANAC58    <---------DEAR3(2) --------->YAB1 --------->ATERF1(1) >HVH21<---------ZAT2           <-----------RAV1(2)<---------AtMYB61 --------->ANAC58    <-----------HVH21   gattacctcggctgaggtcgacgtagcgattaccccaggcttggatgagcgtgaaggtcgcttcctcgctccagcaatcttcacgagaaagcgtcgccgg  21696700           --------->ARR14(3)           <---------ARR14(2)           --------->ARR14(2)           <---------ARR11(3)          <---------HSFB2a(1)          --------->HSFB2a(1)      <------NtERF2     --------->HSFB2a(2)     <---------HSFB2a(2)    <---------LBD16   --------->DAG2   --------->ALFIN1  ---------->DOF2 >NtERF2  <---------HSFC1(2) ----ATERF1(1)  --------->LBD16 --->LBD16--------->HSFC1(2) -->ATERF1(2)   ------>NtERF2 ---ATERF1(2)  --------->LBD16 ---DEAR3(1)   <---------LBD16                                <---------ANAC46 -->DEAR3(1)  <---------LBD16                --------->YAB1  <------NtERF2 ->ATERF1(1) ------>ZmHOX2a(2)           ----------------->AGL3 --LBD16 ----------->ARR10         <---------DEAR3(1)       ------>NtERF2 ->RAP2.3(1)<------ZmHOX2a(2)    <---------DOF5.7(2)       <---------DEAR3(1) -RAP2.3(1)<---------ARR14(3)   --------->WRKY38(1)     ----------->HVH21                   <------ZmHOX2a(1) -ATERF1(1)--------->ARR11(3)   --------->WRKY12 --------->DAG2                         --------->ALFIN1 ---------AtMYB61<------NtERF2  ----------->HVH21<---------TOE2(3)  --------->MYB59 ------->TEIL   -- --NtERF2---------->TaMYB80    --------->DOF5.7(2)    <---------DOF5.7(2)          --------->MYB52(1)   cgaaggtcgggaagatcccggcgaaaaggaatcgttgacggtgtccattataaggtgaacgacggcgagttagatcgaagaagatgaacggtgaggatga  21696800                                ------->GAMYB                               --------->ANAC55(2)                               --------->ANAC58                               --------->ANAC58                      ----------->HVH21                                                     <--------               --------->At5g28300                                                          <--------           <---------DOF5.7(2) <---------ANAC55(2)                                          <--------           --------->MYB52(1)--------->MYB52(1)                                         <----------DOF2          <---------WRKY12 --------->At5g28300                                         <---------ANAC58          <---------WRKY38(1)<---------DOF5.7(2)                    <----------ID1     <---------ANAC58         ----------->HVH21 --------->DOF5.7(2)                    ---------->DOF2 <---------ARR14(2)      <---------DEAR3(1) <---------ANAC46              <----------DOF2            --------->ARR14(2) --------->MYB52(1)   ----------->TGA1              --------->ARR11(3)      --------->TOE2(2) ------->CCA1(2)----------->HVH21                   <---------ARR11(3)     --------->MYB46(3)   <----   gataaacggaggtgaacggtgacagtgacggtaacggaattgaagagaaacgaagttctttttttttaaaaagacaaaccagcgtttttgctttgtgtgc  21696900                                            <---------AHL20(2)                                --------->AGP1         --------->DOF5.7(2)                               <---------ZAT2          <---------MYB52(1)                               <---------At4g35610    --------->TOE2(3)                           <-- -ANAC58                       --------->ZAT2    <-------TEIL               <-----------GT1     <---- -ANAC58  <---------MYB52(1)   --------->At4g35610   ----------->GT1<---------AHL20(2)      <-------- -ANAC46 <-----------HVH21--------->ANAC58  --------->AHL20(2)<------MYB83 <-----------GT1 --------->AHL20(2) -----AtLEC2      *TSS    --------->ANAC58 <---------AHL20(2) <------MYB46(1)   --------->At4g35610<-   atgtactaaaccgtgagccagactaaacgagccagctctagctaatttatatacatcgttaatttggtttttattttttaacagctaaaacgttttaatt  21697000                           ------>MYB83                           ------>MYB46(1)   <---------AHL20(1)    <---------MYB59   --------->AHL20(2)    <---------MYB46(2)   <---------AHL20(2)  --------->MYB52(1)                                          --------->AHL20(2) -------YAB1    <---------ICU4                                                <-------TEIL -----ICU4    <---------TOE1(3)  <---------ARR11(3)             ---------->DOF2    <---------AHL20(2) -AHL20(2)    <---------TOE2(3)  --------->ARR11(3)<---------AHL20(2)  --------->AHL20(2) --------AHL20(2) --------->WRKY38(1)            <---------AHL20(2)  <----------DOF2   tttattttattttgttaatgttgactaccgaacaagataatatttctctatatttttttttcttacaaaagctttaaatattcattttaatatgcaattt  21697100                                                                           <---------AHL20(2)                                                                         <---------AHL20(2)                                                                       <---------AHL20(2)                                                                      --------->AHL20(2)                                                                      --------->AHL20(1)                                            <---------AHL20(2)  ----------->GT1                ------                                            --------->AHL20(1)  <------MYB46(1)                <-----                                       <---------YAB1       --------->ATHB12                   <-----                                  <---------MYB46(3)      ------->TEIL--------->ARR11(3)      <------                            --------->ALFIN1<---------AHL20(1)  <------MYB83        <---------ANAC58                ----------->GT1  <--------P --------->AHL20(2) <---------TOE1(2)    <---------ANAC46              --------->ICU4<-----------RAV1(1)        <---------YAB1 <---------AHL20(1)      <------           <---------AHL20(2) <---------AtMYB61      <---------ICU4   <---------AHL20(2)     <-------        ----------->GT1   <---------YAB1   <---------AHL20(2)  <---------TOE2(2)    <---------ANAC58       <---------TOE2(3)  <---------ANAC46 --------->AHL20(2) <---------MYB52(1)---------------------      ---------->DOF2     <---------ANAC55(1)       --------->ICU4    <---------ARR11(3)   --------->ATHB12   gataagtctaaagttaattagtaatattatgtgtggtagttctaattaaatttcattatgaatcgttggtaatatattttttttttgggtgaatcgttgg  21697200 --------->AHL20(2) <---------AHL20(1) --------->AHL20(1) <---------AHL20(2) ----->GT1                  <-----------GT1 -MYB83            <--------P -MYB46(1)         <---------WOX13(1)                          --------->YAB1 ---TOE2(2)       <-------GAMYB<----------DOF2     --------->AHL20(2) ---TOE1(2)      <---------MYB46(3)      ---------->ID1--------->YAB1  <---------ARR14(2) --MYB52(1)     <---------AtMYB61      <-----------RAV1(1)    <---------YAB1  <---------ATHB12  ----- >WRI1 <---------ANAC55(2) <-----------GT1       --------->TOE2(3)--------->MYB52(1)           ------   taatataatatgtaagttttggttgatattttcctttttttttgttgtctaacttaattagaatatgataacggttccaaatgaattggtatcacatcct  21697300                                                                                            <--------                                                                                            <--------          <---------WOX13(1)                                                                <--------       <---------AHL20(2)                                                              --------->CCA1(2)     <---------ANAC55(2)                                                              --------->ARR14(2)     --------->ANAC55(2)    ----------->GT1              ----------->GT1   --------->AHL20(2)     --- ->ZmHOX2a(1)      <---------AHL20(2)  --------->HSFB2a(2)                 <---------AHL20(2)   <---- --->TOE2(3)      --------->AHL20(2)   <---------HSFB2a(2)        ---------->DOF2     <---------ARR14(2)   aaatagtatgtaattgacaaatttatagcatggtgaaatttctgaaactgtagattgtagagaaaaatcaaagctaattaaaaaatcggatatggctcgt  21697400  Previous    Next  AGI:  At3g58630.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G05550.2); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G05550.1); similar to 6b-interacting protein 1 [Nicotiana tabacum] (GB:BAB83610.1) Range:  from: 21694545    to: 21696918    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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