Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------LBD16                                                           <---------At5g28300                                                          <-----------GT1                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                <---------AGP1--------->LBD16                       ----------->HVH21        <---------ARR14(3)                       =================================HOX2a_HOX2a                  <----------DOF2               --------->ARR11(3)            <---------DAG2                      <---------ARR11(3)            <----------DOF2                     --------->ARR14(2)                      <---------AHL20(1)         ---------->ID1==================================HOX2a_HOX2a                    <---------AHL20(2)         <-----------GT1                        <---------ARR14(2)              <---------ARR11(3)<--        <-----------GT1------>ZmHOX2a(1)        --------->ARR14(3)    --------->AHL20(2)--------->AHL20(2)   gagttttttttttcctttttctttcctgactgtgcttcataaacatgtaagatctcgtatttaccgcaaaaaaaaaattcaagataacattttattttga  21690900                            <------NtERF2                      <---------AtMYB61                <---------AHL20(2)              <---------RVE1(1)             --------->ARR14(2)             <---------ARR14(2)           --------->LBD16 <---------DEAR3(2)          <---------ANAC46 ----------->GT1          --------->ANAC55(2)                                                        --------->YAB1          <---------ANAC55(2)                                                        <---------ICU4         <---------LBD16  <---------DEAR3(1)                                        --------->MYB46(3)      <---------GLK1(1)   --------->ETT(1)                                          <---------ATHB12      --------->GLK1(1)  <---------ORA47(1)        --------->GLK1(2)              --------->WOX13(1)   <---------YAB1   <-----------RAV1(1)           <---------GLK1(2)              <---------WRKY12 --------DOF2<---------GLK1(2)             --------->WOX13(1) --------->YAB1---------->DOF2  <-------TEIL   cttttatgaattccggatttttttgtggtcggcaaatacaagtttcaatctagattctgttcaaacataaacaaactctaaagtcaaccattacatacag  21691000                                           <---------AHL20(2)                                           <---------AHL20(1)                                           --------->AHL20(1)                                          --------->AHL20(2)                                         <---------YAB1                                       --------->YAB1                                       <---------ICU4                                       -------->HAHB4                                      --------->ICU4     --------->AHL20(2)             <---------At4g35610                                      <---------YAB1     --------->YAB1       <---------MYB59      --                                    --------->YAB1    --------->YAB1        --------->MYB52(1) ------                                >>>>>>>>>RAP2.2      <---------AHL20(2)    <-----------GT1     ------                              --------->ARR11(3)    --------->AHL20(2) <---------AHL20(2)      ------                              <---------ARR11(3)    <---------AHL20(2) --------->AHL20(2)    --------                             --------->GLK1(1)  <---------AHL20(2)    --------->AHL20(2)--------->At4g35610                            <---------ARR11(3)<---------AHL20(2)   <---------AtLEC2   <-----------GT1   acacagacacagtcagtctctatagtacatgatatctaaaatgattatattttttttaataaaaattttgcataaaattaccgaatttttagcagacaag  21691100                    <---------LBD16            --------->ANAC58            --------->ANAC58     <--------------OsCBT----------->ARR10  --------->LBD16  <---------ANAC46  --------->At5g28300<------NtERF2                                        ----------->HVH21 <---------ANAC46  <---------LBD16                          <------ZmHOX2a(2) ------->At4g35610--------->ALFIN1                         <---------ARR11(3) --->ANAC46 --------->ANAC55(1)                            --------->ARR11(3) --->ANAC58 --------->ANAC46            <---------------------WRI1      --------->At4g35610 --->ANAC58<---------LBD16         --------->GLK1(2)   ---------->DOF2  <---------At4g35610 -->DOF2  --------->MYB52(1)--------->CCA1(2)   --------->ZAT6   <---------ARR11(3) ---------->ID1  -   cagccgtgaaacacacggaagtcggggaagataagagaagctcgtgatgaacactaagaaagatcaatgtcttaatctgacaattagtcgttttacttaa  21691200                  --------->At5g28300              --------->MYB52(1)         --------->AHL20(2)                                                   ----------->TBP         <---------AHL20(2)                                                 --------->AHL20(2)      --------->AHL20(1)        <---------YAB1--------->ARR11(3)          <-----------TBP      <---------AHL20(1)      --------->AHL20(2)                  --------->At4g35610   --------->YAB1------->GAMYB<---------AHL20(2)               <---------At4g35610   --------->AHL20(2)  --------->TOE2(3)      <---------ARR11(3)  <---------At4g35610 -------->YAB1<-----------GT1<---------AHL20(2)         <---------YAB1  <----------DOF2  ------------   actaataatatttttttaacggtaatctaaaattatttttgatttcaacatcttcattctcattcttctgcttcctttttatatatatcacaacaatctc  21691300                                                                        <-----------HVH21                                                                      --------->ARR11(3)                                                                <---------HSFB2a(2)                 <                                                                --------->HSFC1(1)                  <                                                                <---------HSFC1(1)     --------->ARR11(3)                                                                --------->HSFB2a(2)    <---------ARR11(3)                                                         <---------AtMYB61    <---------YAB1        -   *TSS                     <---------GLK1(2)<---------GLK1(2) <---------ANAC46  <---------HSFB2a(2)- >CBF               <<<<<<<<<TBF1      <---------YAB1  <----------DOF2<---------ARR11(3)          <<<   tcttctctctcttcaccaattcttcttcttgattctctgtgtttattgattctgaggctttggtttcgagaagatgtcacattatagaagacattcgcta  21691400                                                               ------->GAMYB                                                              <---------MYB52(2)                                                              --------->MYB46(3)                                                       --------->TGA2(2)                                                      <-----------TGA1                       <---------MYB52(1)            --------->bZIP60(1)                      --------->LBD16                <---------bZIP60(1)            ----------->GT1                          >>>>>>>>>>HY5     <---------------AGL15                           <---------TGA2(1)     --------------->AGL15                           <---------O2    ----------------->AGL1                           --------->ANAC55(2)    ----------------->AGL2                           <<<<<<<<<<HY5          --------->LBD16   ------>MYB83      <---------ANAC55(1)             <---------ANAC55(2)    --------->HSFB2a(2)   ------>MYB46(1)   --------->ANAC55(2)             --------->O2           <---------HSFB2a(2) ---------HSFC1(2)   <---------ANAC55(2)             --------->TGA2(1) --------->GLK1(1) ---------HSFB2a(1)  <---------ANAC46               <-----------STF1   <---------GLK1(1) -------->HSFB2a(1)  <---------ANAC58               ----------->STF1  <---------GLK1(2)            <- -------->HSFC1(2)   <---------ANAC58              <---------TGA2(2)  --------->ARR14(2)          <-- <<<<ZML2  --------->ZAT6    <----------DOF2      ----------->TGA1    <---------ARR14(2)          ===   gaaccttccattaccagtaaattccgtgattctttgagtttccaacgagacgatgacgtcatcaacaaaccagatttccgagaactcgattttggttctc  21691500                               <---------ALFIN1                             ------>NtERF2                           --------->ATERF1(1)                          --------->ZAT2                          <---------At4g35610                          --------->At4g35610                          ------>NtERF2                          <---------ATERF1(1)                         --------->RAP2.3(2)                         --------->DEAR3(1)                        --------->RAP2.3(1)        <---------ZAT2                       --------->LBD16        <---------ZAT6                      <---------ALFIN1   ------>NtERF2                      --------->ANAC46  --------->DEAR3(1)                <---------ALFIN1       --------->RAP2.3(1)                      --------->LBD16        --------->TGA1a------>NtERF2  ------>NtERF2<------NtERF2               <---------HSFB2a(2)        <---------TGA1a<---------ATERF1(1)<---------MYB52(1)                   --------->HSFB2a(2)        --------->O2  --------->DEAR3(1)--------->RAP2.3(2)                   <---------LBD16        <---------O2------>ZmHOX2a(1) --------->LBD16                     <---------At4g35610       <------NtERF2<---------ATERF1(1)<------NtERF2                      --------->At4g35610    ------>NtERF2  <---------ALFIN1  --------->ANAC46                   <-----------------AGL1 --------MYB52(1)------>ZmHOX2a(1)  <---------LBD16<---------At4g35610--------->ARR14(2)    <-------- -----GAMYB   <---------ATERF1(1)<---------ALFIN1  --------->At4g35610<---------ARR14(2) --------->At4g35610 =================MYC_MYB<---------DEAR3(1) --------->MYB52(2)   ------>ZmHOX2a(1)      --------->ANAC46   cgttgaggcctcgtggctcctcctccgccgctgccactcccgccgctagtggcagcagttcaagctcctctggttctgcttccggaaaacccgctgtcac  21691600                                                                              <---------LBD16                                                                             ------->TEIL                                                                           --------->ZAT14                                                                           <---------ZAT14                                                                          ----------->HVH21                                                                         --------->LBD16                                                                        <---------ANAC55(2)                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                       ------>ZmHOX2a(2)                                     --------->LBD16                  <------ZmHOX2a(2)                                <----------DOF2                      --------->ARR14(2)                               --------->HSFB2a(1)                   <---------ARR14(2)                         ------>NtERF2                   ----------->GT1<---------ANAC58        -----                         --------->LBD16   --------->ANAC46        --------->LBD16           --------                        <---------DEAR3(1) --------->ANAC58       --------->ANAC46<---------GLK1(2)    <---------MYB52(1) <---------LBD16     --------->ANAC58      <---------LBD16--------->LBD16<----- ---HVH21        <-----------HVH21 <---------LBD16       --------->LBD16<---------ANAC55(1)<---------LBD16   ttctcagtttgctagacggagtcactccggcgagctttccggtttaagccagaccagtccggttaaacccggatccgtgaaccggaatttgaaaccgggt  21691700                      --------->ANAC58               ----------->RAV1(2)               <---------At4g35610       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->CCA1(2)      --------->ARR14(1)     <---------ARR14(2)     --------->ARR14(2)                                                                        ------     <---------ARR14(3)                                                                 <------NtERF2     --------->ARR14(3)                                                               <---------ANAC46     <---------ARR11(3)                                                               <---------DEAR3(1)     --------->ARR11(1)                                                              <------NtERF2     --------->ARR11(3)    <---------MYB52(1)                                        ------>NtERF2    <---------HSFB2a(1)   <-------GAMYB                                              <---------LBD16    <---------GLK1(1) --------->ANAC58                                  --------->MYB52(1) <------ZmHOX2a(1)   ----------->ARR10 --------->SPL7    --------->LBD16            --------->YAB1     --------->ATERF1(1) ------>HVH21  --------->LBD16  --------->AHL20(2)             --------->YAB1     <---------LBD16 ->LBD16 --------->At4g35610   <---------WOX13(1)       --------->LBD16 --------->YAB1--------->ALFIN1 ------HVH21   --------->At4g35610   <---------LBD16  <---------LBD16--------->YAB1<---------DEAR3(1)   cacagaagatccgcttccgctggaacgccgttgatttattccggtttggggttctctccggtgaacaataacaataacagttctcgcggcggaggaagcg  21691800  Previous    Next  AGI:  At3g58620.1    Description:  TTL4 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 4); binding. similar to TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3), protein binding [Arabidopsis thaliana] (TAIR:AT2G42580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62839.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69870.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterP Range:  from: 21691303    to: 21694112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version