Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                               <-----                                                                                            <------NtERF2                                                                                           --------->LBD16                                                                                          --------->DEAR3(1)                                                                                         --------->ATERF1(1)       <---------ANAC58                                                                  <------NtERF2       <---------ANAC58                                                                  --------->RAP2.3(1) -------->ANAC58                                          --------->bZIP60(2)            <---------LBD16 -------->ANAC58                             <---------At4g35610    <---------MYB46(3)  <------NtERF2 ---------RAV1(2)    <---------------AGL15   --------->At4g35610   --------->ALFIN1     ------>NtERF2 ------>RAV1(1)    ------->TEIL          --------->ALFIN1<-------TEIL <---------ANAC46  <---------ATERF1(1) ->ANAC58 -------->P <----------DOF2 ---------->DOF2<-----------RAV1(2)                <---------DEAR3(1) ->ANAC58<-----------GT1      ----------->HVH21----------->HVH21<---------DEAR3(1)     --------->DEAR3(1)   acaggcatgacttaccatctgtactttaagaagtgaccttcaagcggggctgactcaggcacatcatcggtggagggggtcttatcaggccgccggagaa  21664800                                 --------->HSFB2a(1)                                 <---------HSFB2a(1)                    --------->MYB46(3)                   --------->ANAC58                                             --------->At5g28300                   ------>NtERF2 <---------HSFC1(2)                            --------->TOE2(3)       <---------REM1(1)       <---------GLK1(2)                               --------->TOE1(3)       --------->ALFIN1     --------->YAB1                                   <---------At5g28300     <---------ANAC46 ----------->RAV1(1)    --------->At4g35610         <----------DOF2    --------->DAG2 <---------At4g35610      <---------MYB46(3)          <---------ANAC46 -------->ANAC55(2)--------->ANAC58        <--------P                   <---------ANAC58 -------->ANAC58--------->At4g35610       --------->At5g28300           <---------ANAC58 ---------ANAC55(2)--------->At4g35610------>NtERF2                <---------ICU4                  -- -------->ANAC58<---------At4g35610  --------->DEAR3(1)          --------->ANAC58                <--- ------TEIL   --------->ZAT18 <------ZmHOX2a(1) <-------TEIL     --------->ANAC58      ----------->GT1 ----------AtSPL3 --------->DEAR3(1) ----------->HVH21      --------->ZAT6  <-----------GT1      <---   gtacgtaaggtgtaagttcgcagccaacaataggaatctccgacggtagatgcactcgtataacgctaagcattgcttttaccgtaactaagttaaattc  21664900                                                                                                  <--                                                                                                 <---                                                 --------->ARR11(3)                             <----                                                 --------->AHL20(1)                            ------                                                 <---------AHL20(1)                           <------ZmHOX2a(2)             <---------MYB52(2)                 <---------AHL20(2)                      --------->MYB52(1)          ------>MYB83                        --------->AHL20(2)                       ==============          -------->P                         --------->AHL20(1)                        ==============HOX2a_HOX2a          ------>MYB46(1)                    <---------AHL20(1)                        ------>ZmHOX2a(1)         ----------->RAV1(1)                --------->AHL20(2)                       ------>ZmHOX2a(2)        --------->AtMYB61               <---------AHL20(2)                          <------ZmHOX2a(2)       --------->MYB46(3)           <---------RVE1(1)                              <---------ARR14(2) --------->ANAC58                  <---------ARR11(3)                              --------->ARR14(2) --------->ANAC58        ---------->DOF2--------->AHL20(2)              --------->ARR11(3)   ------->TEIL -------->DOF2 --------->MYB52(1)  --------->ARR11(3)     <---------TGA1a--------->CCA1(2)   -------- ------HSFB2a(2)<---------TOE2(3)----------->ARR10        <---------O2  <---------ARR11(3)   <------- ------YAB1--------->ZAT6===========================================bZIP_DOF  --------->MYB52(1)-----   tgaaagcaaaccaacactaacgaagcccaaaggctgagatttttaaatatatatattgagacgagagagcataagatataaaacggatcctaatggatcc  21665000        <---------WRKY18(1)       ----------->HVH21     <---------ANAC58     <---------ANAC58     --------->ANAC55(2)   <---------AHL20(2) -------MYB52(1) --------HVH21                                                   <---------HSFB2a(2) -----ANAC55(2)                                                  --------->HSFB2a(2) <---------ALFIN1 >ZmHOX2a(2)                                       --------->ARR14(2)               --------->LBD16 =HOX2a_HOX2a                                   --------->HSFB2a(2)                --------->ANAC46 ->ARR14(2)                                     <---------HSFB2a(2) --------->ARR14(2)      <-------- --ARR14(2)                          --------->TOE2(3)--------->TOE2(3)         <---------At5g28300 ---->ANAC55(2)                    ------->TEIL<---------LBD16  <---------LBD16<-----------GT1   gtcatttacttgaccctaaaactcgacagcatggatgaaccctaattttcccagaaccctaattttcccagaaccctagatttacccccaattttctcca  21665100                                                                               ----------------->AG                                                                               ----------------->AGL1                                                                               <-----------------AGL1                                                                               <-----------------AGL2                                                                             *TSS                                                                          <---------AHL20(2)                                                                         <---------AHL20(1)                     <---------AHL20(2)  --------->ATHB12                <---------AHL20(2)              --------->TOE1(3)         <---------ATHB12                --------->AHL20(2)              <---------MYB59    --------->GLK1(1)        --------->ZAT18--------->AHL20(1)              --------->TOE2(3)  <---------GLK1(1)        <---------ZAT18--------->AHL20(2)       --- ---GT1 <-----------GT1   <---------AHL20(2)      ----------->ARR10     <---------AHL20(2) ----------   aacccgaattttacaacctaaaatttatgaaattgaaatccaatgagtgggatagatttgttcgctacgactaaattaatttccaaagatggacaaagac  21665200                                                                                         <---------ARR11(3)                                                               <---------YAB1            --------->ARR11(3)                                                               --------->ICU4          <---------AHL20(2)                                                             --------->YAB1           --------->AHL20(2)                                                             <---------ICU4        --------->AHL20(2)                                                          <---------ICU4          <---------YAB1                                                          --------->YAB1       --------->AHL20(2)                                                       ------>MYB83            <---------AHL20(2)                                                       ------>MYB46(1)        <---------AHL20(2)                                                     --------->TOE2(3)        <---------AHL20(1)                                                     <---------MYB59---------->DOF2--------->YAB1   >>>>>>>>>>GT-3b                       --------->AHL20(2) <---------YAB1<---------AHL20(2) ------->DOF2            <---------At5g28300  --------->AHL20(2)--------->YAB1--------->AHL20(2) >DOF2                  <-----------GT1  <---------AHL20(2) --------->ICU4--------->AHL20(2)        -   caaagaaaaatacttgggttctatattcactgttttagcccattaaaatttaaaacctaataataataataaaagtttaatttaattataaaatctaatt  21665300                                                                        ----------->GT1                                                                       <---------TOE2(3)                                                                 <---------AHL20(2)                <-                                                       <---------ARR11(3)                          --                                                       --------->ARR11(3)                      xxxxxx              --------->AHL20(2)             <---------ICU4      --------->AHL20(2)           <xxxxxx              <---------AHL20(2)             --------->YAB1<-----------GT1                    ------- -------->TOE2(3)                          --------->ARR11(3)<---------YAB1        --------->ATHB12--   tgcctcaaaaacaaaattatatatcgatttgagtttatttgaaaaaatcatggtttagattttacaattaaacaaggttaaatattgatttgggtttaga  21665400        <---------TOE2(3)        <---------TOE1(3)                                            <---------TOE1(3)  <---------YAB1       --------->ATHB12                        <---------YAB1 --------ARR14(2)     <---------YAB1                      <---------------AtSPL3    --------->ATHB12 ------->ARR14(2)  <---------AHL20(2)            <---------AtMYB61   <---------TOE2(3)       -------- xxxxxxxxxxxxxxxxx>smallRNA(le3)         --------->MYB52(1) --------->TOE1(2)--------->ARR11(3) xxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->RVE1(1) <---------------AtSPL8   <---------YAB1 ---->GT1       --------->ARR11(3)   <---------AHL20(2)   --------------->AtSPL8<---------AHL20(2) ------->TOE1(2)<---------ARR11(3)  --------->AHL20(2)   ---------->DOF2     <---------ARR11(3)   aaatacgattagggtttagattttatgattaaacgagattaaatatcggttttggtttagaaagtacgattaaggtttagattttatgattaaacgggtt  21665500                                                                         --------->TOE1(2)                                                                         --------->ARR14(2)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           <---------MYB52(1)     <---------TOE1(3)                                                        <---------DREB2C(2)       <---------TOE2(3)                                                     <-----------RAV1(1) <---------ARR14(2)                                              ----------->GT1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                             <---------TOE2(3)      ----------->GT1                                       <---------AHL20(2)<---------MYB46(3)      xxxxxxxxxxxxxxxxxxxx                  <-----------GT1      --------->AHL20(2)<---------DEAR3(2) <---------YAB1 --->GT1     --------->AHL20(2)  <-----------GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <----   aaatattggtttagatttattaacaggtttagatttaacaattaaacaaggttaaatgtcggtttgggtttagaaaatacgattagggtttagttttttt  21665600                                                                                                -----                      <---------ANAC46                                                          <----                     <-------GAMYB                                 --------->ANAC46             -----                    <---------MYB46(3)                             --------->ANAC58            <-----                    <---------DEAR3(2)                             --------->ANAC58          <-------                   <---------ANAC46                      ----------->GT1                     --------                   <---------DEAR3(1)                <---------GLK1(2)                      ---------                 ------------>AtMYB77                --------->ARR11(3)  --------->AHL20(2) <--------            <---------AHL20(2)               <---------TOE2(3) <---------AHL20(2)         --------->YAB1 xxx>smallRNA(le3) <---------RAP2.6(2)       <---------TOE1(3) --------->AHL20(2)  <---------MYB52(1) -------GT1 --------->AHL20(2)   ---------->DOF2   ----------->ARR10     <---------AHL20(2)<---------AHL20(2)   acgactaaatgagtttaaatggcggtttggatttacaaagaagaattagggtttagattttgtaattaaacgaaattatatatcggtttggattataatt  21665700  Previous    Next  AGI:  At3g58560.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to hydrolase [Arabidopsis thaliana] (TAIR:AT3G58580.1); similar to hypothetical protein OsI_009920 [Oryza sativa (indica cultivar-group)] (GB:EAY88687.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73496.1); similar to unknown [Populus trichocarpa] (GB:ABK95050.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 21661573    to: 21665177    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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