Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->CCA1(2)                                       <---------LBD16                     <------NtERF2                                  <---------GLK1(2)                      <---------ANAC46 --------->ZAT2                                  <---------ARR14(2)                     <---------ANAC58 <---------ZAT2                               <---------ANAC46                          <---------ANAC58--------->ANAC46                              --------->ATERF1(1)                 <---------DAG2    --------->ARR14(2)                              <------NtERF2                    ===========================HOX2a_HOX2a                             <---------ATERF1(1)               ------>ZmHOX2a(2)    <---------ARR14(2)                             ------>NtERF2                    <------ZmHOX2a(2)    <------ZmHOX2a(1)                            --------->DEAR3(1)                ============================HOX2a_HOX2a                            ----------->HVH21  <------ZmHOX2a(1)  <----------DOF2  ==================                            <---------DEAR3(1) ======================HOX2a_HOX2a   ================== -------->At5g28300    <---------ARR14(2)      =======================HOX2a_HOX2a<---------TOE2(3) -----------HVH21     --------->WOX13(1)<---------ANAC46    --------->GLK1(1)    <---------TOE1(3) -------DEAR3(1)  <-----------GT1 --------->ARR14(2)   --------->ALFIN1  <---------RAP2.6(2)   <----- ------------------WRI1--------->ARR14(2)  --------->ALFIN1 <---------GLK1(1)<----------DOF2   ======   acggtgagaccaaggagtttttgccaatcggcgacggattttgcggtgaggaaaccagtgggagatcgctttatggcgtctttgaggatacaagctgctt  21656100                                --------->ARR14(2)                                <---------ARR14(2)                               <---------GLK1(2)                           ------>ZmHOX2a(2)                       ----------->HVH21                     --------->O2                     <---------bZIP60(1)                     <---------TGA1a                     <---------ANAC58                     --------->TGA1a                     <---------ANAC55(2)                     <---------ANAC46                     <---------ANAC58                     <---------bZIP60(2)                     <---------O2<-------TEIL                  ----------->TGA1                  <---------ATHB12<---------ANAC58 --------->ZAT14         --------->MYB46(3)                  ----------->HVH21              ========================bZIP_DOF  --------->ANAC58                --------->WOX13(1)<---------ANAC58 <---------ZAT14        --------->ANAC58   ------>ZmHOX2a(2) --------->ANAC55(2)         --------->O2             --------->ANAC58  <------ZmHOX2a(2)  <---------ANAC55(1)         --------->TGA1a       <---------ZAT18 =========HOX2a_HOX2a--------->bZIP60(1)        ------>MYB46(1)        --------->ZAT14 ========HOX2a_HOX2a----------->STF1            ------>MYB83  <----------DOF2      --------->ANAC46 -----DOF2    <---------YAB1<-----------RAV1(2)<---------ALFIN1   <---------YAB1   --------->ANAC58 ==============================bZIP_DOF       --------->MYB46(3) <-----------HVH21------>ZmHOX2a(1)--   tgagatcggtctcagtatcaatgacgtgatccaggttcttgttcttcacccacttcagtctcacctttgtcattgcacccattcctcgccattgttgatg  21656200                     ---------->DOF2                  --------------->AGL15                  <---------------AGL15                                  --------->ANAC58                 ----------------->AGL1                            ---------->DOF2      ------>ZmHOX2a(2)        --------->At4g35610     <----------DOF2                 <---------TOE2(3)     <---------ARR11(3)        <---------At4g35610---------->DOF2           ---------->DOF2     --------->ANAC58 --------->GT1   ----------------->AGL2        ------->TEIL --------->CCA1(2)         --------->ARR11(3)   ctggtgaaacagcttactcaccgaaaagagaaagctttgtgatttgacgaacatctaaagagatttgacgaaagcgcgaaatgtggatgatctgtaattg  21656300                               <---------LBD16                         <---------ZAT18                         --------->ZAT14                        <---------ZAT6               --------->ATHB12                <---------TOE2(3)                   <---------YAB1                <---------TOE1(3)             <------ZmHOX2a(1)  --------->ZAT18     <---------ANAC46      --------->MYB59                   --------->ALFIN1     --   agagtgcaaaatgggtttagggtttagtgttctctcggagtttagttaggacttatcattgaaagaatgaatagagagaagtaggggagagtaatgcaga  21656400                                                                             ---------->DOF2                                                                       --------->ZAT14                                                                   --------->ANAC58                                      <---------GLK1(2)            --------->ANAC58             <----                                      --------->ARR11(3)       <---------ALFIN1                 <----                               --------->DAG2                  *TSS--------->ANAC46             <----                              ---------->DOF2                  ----------->RAV1(1) --------->ANAC58         --------->ANAC46--------->GLK1(2)            --------->ZAT6   <---------ZAT14 <----------DOF2  --------->ALFIN1       ------->TEIL <---------ARR11(3)    --------->PCF2  <---------WRKY38(1) <---- ------->DAG2           <---------ARR14(1)<-----------GT1  <-----------TCP11(1)    --------->ANAC58   gaaggtgctcgacgaaatgcctgaacgaatctaaaagcgagatttttcgacttctaactctaggcccacaggctacagtcaaagtaagccttttaagttg  21656500                                                         <-------TEIL                                                         <---------REM1(2)                                                         --------->ZAT14 <---------HSFB2a(2)                                     <---------ZAT14 -----DEAR3(2)           --------->TOE1(3)             <---------SPL7 -----MYB46(3)           --------->TOE2(3)          --------->At4g35610     --------->YAB1 --MYB46(1)              <---------MYB59            <---------LBD16--------->ARR14(2)         ------- --MYB83                *TSS               <----------DOF2         <---------ARR14(2)        --------   gttcgcgatatgtttttgcagacagaacctaaaaacttggaacttctttttatctgcggtacacagccaaatttgcaaaaataagttccaacgcgtctag  21656600               <---------HSFB2a(2)         ----------->HVH21        --------->SPL7      --------->TOE1(2)                    --------->ANAC46      <---------HSFB2a(2)     <---------ANAC58                      --------->ANAC58 <---------At4g35610                  <---     <---------ANAC46                      --------->ANAC58 <---------ZAT2                       <---     <---------ANAC58         ----------------------->TaNAC69(2) ------>ZmHOX2a(1)             <-----    <-------TEIL            <-------TEIL<-------TEIL     <---------ANAC58                    -------- -->HSFB2a(2)  --------->HSFB2a(2)  <---------TOE2(3)    <---------ANAC58                   <-------- ->REM1(2)    <---------LBD16----------->GT1  <----------DOF2    --------->HSFB2a(2)  ------>ZmHOX2a(1)   actcgattcgtgcgactcgggaagactaggctcgtttaaaggttcacgcttttgatatttcgagctcctagagacctagactctagtcctgaggctgatt  21656700                                                                          <---------ANAC46                                                                       --------->ALFIN1                                                                     <---------ANAC46                                                                     <---------O2                                                                     --------->TGA1a                                                                     <---------bZIP60(2)                                                                     <---------TGA1a    <------ZmHOX2a(1)                                                --------->O2 ---MYB46(1)                                                         <---------ANAC58 ---MYB83                                                            <---------ANAC58----------->GT1 ----WOX13(1)                                   ----------->HVH21   <-----------------------TaNAC69(2) ->ATHB12              <---------WOX13(1)   ---------->DOF2<------ZmHOX2a(1)<------ZmHOX2a(1)      <- -YAB1       ---------->DOF2                ===================================bZIP_DOF   --------->MYB46(3)   ggtagaggaaattggaaaagcttggattgaaaactatggaagcgaagaaagtgacagaagaggaagaagagacgtggaggagagagatagtaacaagcgt  21656800                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                --------->ARR14(2)                                                  <                                <---------ARR11(3)                                                  <                                --------->ARR11(3)                     <---------ZAT18    ------>ZmHOX2a(1)                                <---------ARR14(2)               <----------DOF2         --------->TOE2(3)              <---------TOE1(1) --------->AGP1                   <---------DAG2          --------->TOE1(3)         <---------------AtSPL8 <-----------ARR10               <---------ANAC58     ------>ZmHOX2a(1) --------YAB1 <---------TOE2(1) <---------AGP1       <--------P <---------ANAC58<---------At4g35610 <   tatgagattagtgagtacgagattgcctcagacagatctaatttctctacttctggttagcccatggctttatcgcaccctcatctcctatccttcaatc  21656900                                                                                       <-----------HVH21                                                                                --------->KAN4(2)             <----------DOF2                                                   <---------MYB46(3)    <--------P                                                                <---------WOX13(1)  ----------->GT1                                     <-----------GT1         --------------->AtSPL8  <------MYB83                                        <---------YAB1         <---------ANAC58  <------MYB46(1)                                   --------->YAB1           <---------ANAC58 <---------MYB46(3)                             --------->AHL20(1)          --------->ATHB12 ---------ANAC58                                <---------AHL20(2)         <---------YAB1 ---------ANAC58                                --------->AHL20(2)      --------->ALFIN1 ---------ANAC46      <----------DOF2          --------->AHL20(2)   ---------->DOF2   <----------DOF2   tggctggtaactaaactttgacttcttttaagtctttccaagttttcaaaaaaattatacttatctgattcaaagtgttgattgttccctttcagaccat  21657000  Previous    Next  AGI:  At3g58520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23445.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) Range:  from: 21654747    to: 21656463    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g58530.1    Description:  F-box family protein-related. similar to protein binding [Arabidopsis thaliana] (TAIR:AT5G23340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23443.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 21656524    to: 21659345    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version