Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------MYB52(1)                                                      --------->MYB52(1)                                                     ------->GAMYB            --------->ANAC58                                               <---------ANAC55(2)            --------->ANAC58                              <---------ARR14(2)    --------->MYB46(3)     --------->ARR14(2)                              --------->ARR14(2)  <-----------GT1       <---------HSFB2a(2)     -----                       --------->ANAC58        --------->ANAC55(2)      --------->HSFB2a(2)     -----                       --------->ANAC58        --------->ANAC58 --------->DOF5.7(2)       -----------                    <------ZmHOX2a(1)          --------->ANAC55(1)     <---------LBD16   ------>NtERF2                 --------->YAB1                --------->ANAC46--------->TOE1(3)         <---------ATERF1(1) ---------->DOF2<---------ATHB12        ---------->DOF2      <------NtERF2 <---------ARR14(2)   ----- --HSFB2a(2)  --------->WOX13(1)<-------TEIL   --------->ANAC58--------->TOE2(3)        --------->ANAC58 ->HSFB2a(2) --------->MYB46(3)--------->CCA1(2)<---------MYB52(2)<---------DOF5.7(2)   --------->ANAC58   aggcaaagactcacaacaatcaggaacgcccagatacacagacaaagacaagtaaccatcggcatcgttaacttctggataggcaataagacgcctgcaa  21585900                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                              -------        ---------->DOF2                                                                      --------    ------------------------>ANAC81                                                         ------>NtERF2   ---------->DOF2                                               --------->ARR14(2)        --------->RAP2.6(2) ---->ANAC58                 --------->AHL20(2)                  <---------ARR14(2)       --------->MYB46(3) ---->ANAC46                 --------->YAB1                     <------ZmHOX2a(1)        ------>NtERF2 >RAV1(2)                   <---------ATHB51                 <------ZmHOX2a(1)<-----------GT1<------- ---->ANAC58                <---------ATHB12    --------->CCA1(2)<---------GLK1(2)       <---------At4g35610   gccaaaaaagaaaagaccaaaaactcagcaataatatcaacttcacatagatagaagaaaacaggaggattctcttcttcttaccacttgcagccaccaa  21586000                                                                  ----------->GT1                                                                 <-------MYC3 ------->GAMYB                           ----------->ARR10       ------->MYC3   <----------DOF2 ----->MYB46(3)                      <---------ZAT14             ------->MYC2  <---------ANAC58 ->MYB46(1)                         --------->ALFIN1  --------->ANAC58   --------->AHL20(2) ->MYB83                 --------->ARR14(3)           --------->ANAC46   <---------AHL20(2) ----->RAV1(1)           <---------ARR11(3)           --------->ANAC58  <---------AHL20(2)   <------- -->AtMYB61              <---------ARR14(3) --------->GLK1(2)    <-------MYC2  <---------ANAC58 ->MYB46(3)              --------->ARR11(3)<---------GLK1(2)  <---------DOF5.7(2)         --------->ARR11(3) --MYB52(2)      ------->TEIL--------->AtLEC2 --------->TOE2(3)------->TEIL  <-----------GT1------>ZmHOX2a(2)   caacgaaaattttagaacgaacttcaagaccttgcagagtggagagattcttaatcacccaagtgaacgtgttatttatttgctttcccattgatctaga  21586100                      <---------HSFB2a(2)                      --------->HSFB2a(2)                    --------->MYB52(1)                    -------->P                --------->ANAC46                --------->ANAC58                                     --------->MYB52(1)                --------->ANAC58     ---------->DOF2              --------->ANAC58             <---------ATHB12     --------->TOE2(3)               --------->ANAC58            --------->ANAC58--------->TOE2(3)                     --------->ANAC46                <<<           --------->WOX13(1)     --------->TOE1(3)           <---------ZAT2               <---------ZAT14 --HSFB2a(2)--------->ANAC58--------->TOE1(3)                 --------->ZAT2          <---------YAB1   tgaagagtcttggcaatcaagctaccagaacattaacctcaaagtattaagtcaaacaatctcgagctacgaaaccgaaacagagattacgattacactg  21586200                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)          <----------DOF2                                               --------->ZAT18         <---------------AGL15                                          --------->ZAT14        ----------------->AGL3                                          <---------ZAT18    ------->TEIL      --------->ANAC58                                                  <---------ZAT14 --------->ANAC46      --------->ANAC58                            <-----------GT1   --------->DAG2      --------->ANAC58 <<<<<<WRKY18 ---------->DOF2--------->ZAT6 --------->ANAC55(2)    ---------->DOF2      --------->ANAC58   tcaaaatcaagcctttaaaagttagaacatcacactaacaatggataagtgtttacccccttagagtacaaaagtgcagatttagcctaaacgcatccaa  21586300                           <---------TOE1(2)                          ------>ZmHOX2a(1)                          --------->STY1(1)                                        <---------AtMYB61-                       ------>ZmHOX2a(1)                                         <----------DOF2    <                    ------>ZmHOX2a(1)                                      --------->YAB1          <-              <----------DOF2                 <----------DOF2        --------->ANAC46              <-              <---------DAG2                  *TSS--------->MYB59    --------->ANAC58              --             <---------ANAC58            <---------At4g35610         --------->ANAC58         -------             <---------ANAC58        --------->TOE2(3)               --------->ANAC55(2)  <---------At4g35610   atttgactgcgaatggcttttcctcctcctagggttttatcttagcagcttttaggtcattctattaatccacgtattaatagctttggtttagctatca  21586400                                                            <---------ICU4                                                            <--------ATHB1                <--------P                      <-----------GT1               <-------GAMYB                --------->YAB1  --------->YAB1              <---------MYB46(3)            <---------AHL20(2)              --------->ATHB12              <--------ATHB1  --------->ATHB51           <---------ANAC58                 <---------ICU4  <--------HAHB4        <<<<<<<<<<GT-3b                     <---------AHL20(1) <---------AHL20(2)    <---------AHL20(2)                      --------->AHL20(2) --------->AHL20(2)   <---------AHL20(2)                      --------->ICU4   -------->HAHB4            --------->ZAT6 -------->AHL20(2)                       --------->YAB1    --------->AHL20(2)       <-----------GT1 ---------AHL20(2)     <------------CBF <---------YAB1     --------->ICU4     --------->AHL20(2) --------AHL20(2) ----------->GT1      --------->AHL20(2)  <---------ATHB51   --------->YAB1 --------AHL20(1) <------MYB46(1)      <---------AHL20(2)  <---------ATHB12  <<<<<<<<<ARR2 ------->AHL20(2) <------MYB83    --------->AHL20(2)       <---------YAB1  --------->WOX13(1) ----->CBF <---------ANAC58       <---------AHL20(2)     --------->YAB1 <-----------GT1   atttttttatttttcttggttggataattgtttgattttattttaataattttctggtctaataattaatcgattaacaatcaaattatctctatttttt  21586500                                                                                                 ----                                                                  --------->ANAC46               ====                                                                --------->ZAT6                <------                                                                <---------ALFIN1           <---------ICU4                                                            <-----------HVH21         --------->ANAC55(2)                                                       <---------SPL7 ------>ZmHOX2a(1)   <---------YAB1                                         --------->ETT(2)   <-----------TGA1          <---------ANAC55(2)                                    <-------GAMYB    --------------->AtSPL3   ------>ZmHOX2a(1)<-----           ------>ZmHOX2a(1)    ------>NtERF2        <---------------AtSPL3 <---------ZAT18--------->YAB1   gttttttggtttcctacaattttggttcaatccctgcccgttgtagacctcgtttgcagtaccgtcacactcctctagtcctcttcatacgtataattac  21586600                                                                        --------->ANAC55(2)                                                              ----------->GT1                                                        --------->ICU4  --------------->AGL15                                             <------MYB83     --------->ANAC55(2)                                          --------->ARR14(1)  <------MYB46(1)                                          --------->CCA1(2)   <------MYB83                                         --------->ARR14(2)   <---------ANAC55(2)                            <----------DOF2 --------->MYB59  --------->MYB59                            --------->TOE2(3)<------MYB46(1) --------->MYB46(2)                 <---------AHL20(2)      <---------ARR14(2)  --------->MYB111(1)                <---------ARR11(3)       --------->ARR11(1) <---------MYB55(1) ----------->AGL15    <---------YAB1     --------->ARR11(3)<---------MYB52(1)          <<<<<<<<<<WRKY63 =======================================================================================MADS_MADS --- -----GT1       --------->ARR11(3)   ---------->DOF2 <---------YAB1     <---------------AGL15    <--- ----At5g28300  <---------AHL20(1)------->GAMYB    --------->YAB1     <-----------GT1----------->GT1   catgaacagaacccagtatatattttgatactttaaccccaaagatttggtaatggtaattgttaggtaattttacatatttagaaatagtcaaattcaa  21586700                                                                                  <---------ICU4                      <---------ANAC58                                            ------>ZmHOX2a(2)          <---------AHL20(2)------>ZmHOX2a(2)                                    <---------YAB1   ----------->GT1    --------->ANAC55(2)                                       <---------ARR11(3)  --------->DAG2      <---------ANAC55(2)--------->DOF5.7(2)          ----------->GT1 ---------->DOF2      <---------ANAC58<---------TOE1(3)               <----------ID1       ---------- ------>YAB1        <-----------GT1   ------->TEIL                   ----------->GT1------>ZmHOX2a(1) ------ATHB12    <---------ZAT6      <---------DOF5.7(2)      ---------->DOF2   --------->ARR11(3)<--   tgataaagtgattttttttgtgttacttgatccatatgtgaacgttacccatctgtttagttagaaaagagaaggaaaaaatgatccttactcaaaagaa  21586800  Previous    Next  AGI:  At3g58260.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G58270.1); similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G58270.2); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 21584731    to: 21586346    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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