Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------AHL20(1)                    <---------ALFIN1           --------->ANAC58                 --------->MYB46(3)        --------->YAB1 --------->ARR11(3)                --------->ANAC58    <---------ARR11(3)    --------->AHL20(1)                --------->ANAC58    --------->ARR11(3)  <---------AHL20(1)              <---------ALFIN1     <---------CCA1(2)    --------->AHL20(1)             <---------At4g35610  <---------AHL20(1) --------->YAB1           <---------ARR14(2)             --------->At4g35610  <---------ARR11(3) --------->AHL20(2)       --------->ARR14(2)             <---------ZAT2       --------->ARR11(3)<---------ATHB12     ----------->GT1   <---------ANAC46             --------->ZAT2       --------->AHL20(1)<---------ATHB51   --------->YAB1  <----------DOF2     --------->GLK1(2)      --------->ANAC46   --------->ANAC58    <---------ANAC58    <---------DAG2    <---------GLK1(2)     ----------->RAV1(1)  --------->ANAC46    <---------ANAC58   <---------DAG2   gaactagaatctcgcagcacccaaactcccacaaaatatatctactaataagcaataatatatattgtggctagcatgaaaatactcacctttacgttga  21582700                                                                     <--------ATHB1                                                                     --------->ATHB12             <--                                              <---------ARR14(2)    --------->ICU4           --------                    <-----------GT1           --------->ARR14(2)    <---------ATHB12        ---------             ----------->GT1               <---------ANAC46   --------->ANAC58              <--------        <---------HSFB2a(2)    <---------TOE2(3)        --------->AtLEC2              --------->TOE2(3)        --------->HSFB2a(2)  ---------->DOF2  <-----------ARR10     <---------YAB1   --------->bZIP60(2)        --------->HSFC1(1)--------->YAB1   <---------ANAC58   --------->ANAC46   --------->At4g35610       <---------LBD16<---------YAB1       <---------ANAC58   --------->ANAC58   <---------At4g35610   gagcatttttctggaatgtgatttactatagtaaaggaaaactgtgcgtgtcttctccatccacaaggcaatgattcagactcagcaacgtcaagatata  21582800                                                                                       ---------->DOF2      --------->YAB1                            ------>NtERF2                        --------->ANAC58     <---------ATHB12                          --------->ANAC58                      --------->ANAC58 --------ID1                                   --------->ANAC58                --------->At4g35610 ->CCA1(2)                                ---------->DOF2                    --------->YAB1      <--- >ARR11(3)                           <----------ID1    --------->ANAC58    ------------------------>ANAC81 -ARR11(3)          <---------YAB1---------->DOF2      --------->ANAC58   --------->WOX13(1)  -------   gagacaaatgatcagatttagtatcatttcccttgggaaaggccaaaagacgcctgtaagcaaaatcaatagaaaacaatcagcaaaacgaaagagaatt  21582900                                                <---------MYB59                                                --------->TOE1(3)                                                --------->TOE2(3)                                         --------->ANAC55(1)             <----------ID1          ----------->GT1                --------->ANAC58              ---------->DOF2       --------->YAB1                    --------->ANAC55(2)          <---------AHL20(2)   --------------->AGL15                 <---------ANAC55(2)     --------->AHL20(1)                <- ------AHL20(2)                          --------->ANAC46       --------->AHL20(2)                 <- -->GLK1(2)                              --------->ANAC58       --------->YAB1             --------->TOE2(3)   ttttttcaaaaatagcaaaaaaaacaatatcgccgtatttatcacgtaaacctaaatttggacgaataatattaaaagacaaattgtcttaattcttagt  21583000                       --------->ANAC58                       --------->ANAC58                     --------->YAB1                    <---------ATHB12                  --------->WOX13(1)                <---------MYB52(1)              --------->RAP2.3(2)              --------->RAP2.3(3)              --------->RAP2.6(2)             --------->RAP2.3(1)                                                   ------->GAMYB            <---------At4g35610                                                 ------>MYB83            ------>NtERF2                                                       ------>MYB46(1)            --------->At4g35610                                                 --------->MYB52(1)         <---------At4g35610                                            <---------ICU4         --------->At4g35610                                         --------->TOE2(3)      --------->At4g35610                                          --------->GLK1(2)      ----------->RAV1(2)                                          --------->ICU4--------->At4g35610 <-----------GT1<------NtERF2                                <------ZmHOX2a(1)<---------MYB59 --------ANAC58<---------RAP2.6(3)                          ----------->GT1   --------->MYB46(3)    - --------ANAC58<-----------HVH21                       ---------->DOF2<---------YAB1                -   ttcttaccatctgcagccgtcaatcacgaactgatcagagtatattttctcagattgcaaagaggagaaattcttaatgacccaactgaatttcttctta  21583100                                                      ----------->RAV1(2)                                                      --------->At4g35610                                                    <---------ALFIN1                                                    --------->ANAC46                                                 <---------REM1(2)                                                ------>ZmHOX2a(1)                                        --------->STY1(2)        <---------AHL20(2)        --------->KAN4(2)      --------->WRKY38(1)<---------ALFIN1       <---------ICU4  ------>ZmHOX2a(1)<---------STY1(2)       <---------AHL20(2)      <---------YAB1 ------>ZmHOX2a(2)------>ZmHOX2a(1)         --------->AHL20(2) -------->At4g35610  ========================HOX2a_HOX2a    --------->AHL20(2)     ------------>CBF -------->ZAT2       ==================================HOX2a_HOX2a   ----------->GT1      <---------ETT(2)   tcagcttgatcattccccattgatcctctcatgttgactcctagctactcctacacacctgaataaataaatcgaaatatcagacaacaatctcgacaaa  21583200                       <-----------GT1                                                          -----                   --------->ARR11(3)                         ------------>CBF                  <----                   <---------ARR11(3)               <---------YAB1                        <---------TOE2(3)                 <---------TOE2(3)                 <---------AHL20(1)                     <---------TOE1(3)                 <---------YAB1             --------->At4g35610             <------ZmHOX2a(2)  ------          <---------TOE2(3)                 <---------At4g35610   --------->ICU4  ----------->GT1   <         <-----------GT1             <------------CBF   <-----------GT1     =======================HOX2a_HOX2a         --------->MYB52(1)   <------ZmHOX2a(1)    <---------AHL20(2)       ------------>CBF<------ZmHOX2a(1)         <---------DOF5.7(2)<---------TOE2(3)    <---------AHL20(2)  <---------YAB1    --------->ICU4   caaaactaaattaacgattaagattttactaaggaatagaattgtcagcatattattttttccctacaatgtttatagatcaatgggtaattaaggattt  21583300                                                  <---------WRKY45                                                  <---------WRKY38(1)                    --------->DAG2                                                  <---------WRKY12                 --------------->AGL15                                               <------MYB83                        <---------------AGL15                                               <------MYB46(1)                     ------>ZmHOX2a(1)                                             <---------MYB52(1)                   --------->TOE2(3)         <------ZmHOX2a(1)      ------>ZmHOX2a(1)--------->WRKY18(1)              --------->TOE1(3) <---------At5g28300   <---------DOF5.7(2) <---------ZAT6                       ------>MYB83      --- ---->AHL20(2)         ---------->DOF2     <-----------RAV1(1)         --------->ANAC46 ---------->DOF2 -----AHL20(2)       --------->DOF5.7(2) <---------At5g28300  <-------TEIL      ------>MYB46(1)   --- --->AHL20(2)      <---------MYB46(3)   <-----------GT1  --------->AHL20(2)  XXXXXXXXXXXXXXXXXXXX>MIR824 -----------GT1    ----------->GT1    <----------DOF2    ----------->TBP     --------->MYB46(3)------   aattaccacgaggaatacgagtcgttaaaggctcctagggatttactgttggtcaacatatatatacatttacaccgaaaccatccttaaaaaaggagtc  21583400                     --------->GLK1(1)                                 <---------AHL20(2)                     <------------CBF                                  --------->AHL20(2)                     <---------GLK1(1)                              <---------AHL20(2)                    <---------ARR14(2)                             --------->AHL20(2)                    --------->ARR14(2)                             <---------AHL20(1)            <---                  --------->LBD16                                  <---------AHL20(2)          <-----    --------->HSFB2a(1)                                         --------->WOX13(1)             ------    <---------HSFB2a(1)       --------->AHL20(2)             --------->ANAC58            <---------TOE2(3)   --------->DAG2--------->ANAC55(2)                         --------->ANAC58        <----------DOF2 ------>ANAC58   --------->ANAC46 <---------AHL20(2)   --------->MYB52(2)            ------>ZmHOX2a(1) ------>ANAC58   <---------ANAC55(2)       ----------->GT1 ---------->DOF2          --------->TOE2(3) --->WRKY18(1)  <---------LBD16  --------->AHL20(2)    <---------MYB46(3)        <-----------GT1<----   aaggaaaggttctattaatccggaattgccgataaattaatccaattgttaataggtttgttaaagcaattaattttttgatttatcctttaatgaataa  21583500    <-----------GT1        --------->ANAC46                                                         < ---------MYB.PH3(1)       --------->ANAC58                    <-------GAMYB                    <---- ------GT1     ------->TEIL--------->ANAC58            <---------AHL20(2)                ---------->ID1 --->MYB52(1) <---------CCA1(2)                        --------->AHL20(2) --------->ANAC55(2) ------- -----At5g28300--------->ARR11(3)             <---------MYB52(1)    ------->TEIL <---------AHL20(2)<-   ccgttttaacaatattgtatcttgtttttaagcaagttcgatttatcagttatttgtttaatttcggttgaatcttatgtgatttttttttgtcgttcat  21583600  Previous    Next  AGI:  At3g58250.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G58360.1); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 21581722    to: 21583120    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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