Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------------->AtSPL8          <---------ANAC58          <---------ANAC58  <---------ALFIN1                                                                             ------ ------>ZmHOX2a(2)                                                                             ------ --------->MYB46(3)                                                                          -------- ------ZmHOX2a(2)          --------->AHL20(2)      --------->DAG2                           --------- --------ARR14(2)          <---------AHL20(2)     ---------->DOF2                         --------->ANAC58 ------->ARR14(2)        <---------YAB1      ------>ZmHOX2a(1)                            --------->ANAC58 ----------ARR10      <---------YAB1         ----------->GT1 ---------->DOF2     <----------DOF2-----   ggatccacccttgcttcgttccttcttattaaaacagtgttttagtcctgtaaaaagtcatcacaaagcatatataaaactgtctttaaaacaagcatta  21580400                                             <---------ARR14(2)                                             ------>MYB46(1)                                --------->ICU4                           <---------ANAC55(2)                           --------->ANAC55(2)                       --------->ANAC58   --------->ANAC55(2)                                       -                       --------->ANAC58   <---------ANAC55(2)     <---------HSFB2a(2)               - --->ICU4         <---------At4g35610   <-----------GT1           --------->HSFB2a(2)               - --->AHL20(2)     --------->At4g35610--------->YAB1<---------ANAC58            --------->ANAC46------ ->TOE2(3)--------->GLK1(2)--------->ANAC58  ------>MYB83         <---------HSFC1(1)    <---------TOE2(3) >YAB1   <---------GLK1(2) --------->ANAC58  --------->ARR14(2)   --------->HSFC1(1)  ---------->DOF2 ---->YAB1--------->ARR11(3)    <---------ATHB12   <---------ANAC58          <-----------GT1   ------   attatctaatagaatcttgcagcgcaagtaagtaatcactaatcacctatctgtcttgagagtttcttcgagaaaaaatttacgacagtaaaggaaacct  21580500                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                 -                                                 --------->AGP1                                    --         --------------->AGL15                <---------HSFB2a(2)                                  <-     <----------DOF2                --------->YAB1                                                 <- -------->ANAC58                   <---------ATHB12                                               <-- -------->ANAC58        --------->ANAC58      --------->HSFB2a(2)                 <---------ANAC58<-- -------->ANAC46        --------->ANAC58     ----------------->AGL1               <---------ANAC58--- --->TOE1(3)   --------->YAB1     --------->ANAC58       ---------->DOF2          <---------ANAC46--- --->TOE2(3) --------->AtLEC2     --------->ANAC58<------ZmHOX2a(2)            <---------CCA1(2) <---   tcacgacctttctccattcagaaggcaagaattcacaatcaacaagttccagatccagacaaaggaattgatgaccatctcgtttcttggaataggccag  21580600         --------->ANAC58         --------->ANAC46         --------->ANAC58   <---------ANAC58   <---------ANAC58 -------->KAN4(2) ------->KAN4(1) --------KAN4(1) ---------TaMYB80 -------KAN4(2)                                   --------->TOE2(3)                               <-- -------ARR14(2)                           --------->ANAC58         <---------MYB52(1)            <-- ------->TaMYB80                           --------->ANAC58        --------->TOE1(3)          ------- ------>ARR14(2)                        <---------bZIP60(2)        --------->TOE2(3)       <--------- ------GLK1(2)                       ----------->HVH21  ----------->GT1           ---------->ID1  ---   aatatgcctgcaagcaaaaaccatacaatgaaacaatggatgacctcgcaaacctatattgaaataaaacgttagataactcttgttgtcttcttaccat  21580700           --------->YAB1          <---------ATHB12         ------>MYB83         ------>MYB46(1)        --------->WOX13(1)           --------->ALFIN1                     --------->ZAT14       --------->AtMYB61           <---------ANAC58                       <---------ZAT14     ------>NtERF2          <---------AHL20(2)                            <---------ZAT18 -------MYB46(3)      ------>ZmHOX2a(2)                                   --------->ZAT18 ---------RAV1(1)    --------->At4g35610                           --------->ANAC46          <------- -------->AGL15      <---------At4g35610   ----------->HVH21       --------->ANAC58         <-------- --GT1 --------->MYB46(3)  --------->AHL20(2) --------->ANAC46     --------->ANAC58         <-------- ------>MYB52(2)    <---------AGP1 <---------ANAC58        --------->TOE2(3)                ---------   ttgttgccaccaatcaagaattgatctgaataaatgggcttggggctcacagaacaaaaattcttaatcacccaagtgaacttgttatcgactggattcc  21580800                                                            --------->ARR11(3)                             --------->TOE2(3)              <---------ARR11(3)                     --                            ----------------->AGL1          --------->AHL20(1)                     <-                           --------->MYB52(1)               <---------AHL20(2)         --------->ARR11(3)   <---------TOE2(3)       -------->P                       <---------AHL20(1)         <---------ARR11(3)  --------->YAB1     --------->YAB1                         --------->AHL20(2)         --------->GLK1(2) --GLK1(1)          <---------ATHB12                ---------->DOF2              <-----------GT1   == -ARR14(2)        --------->WOX13(1)               --------->AHL20(2)         --------->YAB1      --- -GLK1(2)       ------------>CBF      ---------->DOF2<---------TOE2(3)       <---------YAB1      ---- >ARR14(2)     --------->AtLEC2     <---------YAB1 <---------AHL20(2)       <-----------TBP  <-------   ccattaatgaagactccttgcaatcaaactacctgaatatgaaagatgagaaattaaagaaatatattctgccatagtttttataacaaaatctagtgat  21580900                                         <---------WOX13(1)                            <---------LBD16                                  --------->MYB52(1)                           <---------LBD16                                 --------->MYB46(3)                        <---------ARR14(2)                                 <---------MYB52(2)             --------->ATHB12--------->LBD16  ------------>CBF           --------->YAB1 ---->ZmHOX2a(1) --------->ATHB12       >>>>>>>>>ARR2               ------------>CBF --------------AGL15 <---------ANAC46   <------------CBF      <---------ARR11(3) ==================================================================================================== ------>TOE2(3)<---------WOX13(1)     <---------YAB1          --------->ARR11(3)              ------- -->ZmHOX2a(2)<------------CBF  <-----------HVH21             <-----------ARR10               <------ --ZAT6 <---------ZAT6  --------->ARR14(2)   <-----------GT1  --------->GLK1(2)             ---------   cctaaaaatagtgtttgattgattcgtataccggggtcatttgattgtttcaattcactaacaaaatctagtcaataacaaacgactaaatataggctaa  21581000             <---------YAB1                                                                         <        <---------ANAC58                                                                    <--------        <---------ANAC58                                                                    <--------        <---------ANAC55(2)       <---------WRKY18(1)                                       <--------      <-----------GT1           <----------DOF2                                            <-------TEIL   <---------ZAT6       --------->ZAT14                                                  --------->ARR14(2) =========MADS_MADS     <---------ZAT18                                               <---------TOE1(2) -------->AGL15         --------->ZAT18 ----------->TBP                  --------->ZAT14 <---------GLK1(2) ---------AGL15 <---------YAB1 <---------ANAC58 --------->GLK1(2)        <---------ZAT18 <---------ARR14(2) -->GT1 --------->ANAC55(2)    <---------ANAC58<---------GLK1(2)         <---------ZAT14<------ZmHOX2a(1)   aaatagtattacttgattatttttagtgcattcgcttgacttataaaaagattctaaatttctacgttgatacagtctacttatgtagtaggattcgtgg  21581100                                                <-----------GT1                                               <---------ZAT14                                               --------->ZAT14                                               --------->WRKY12                                     --------->AHL20(2)                                     <---------AHL20(2)    ----------->GT1              <---------RVE1(1)          <---------MYB52(1)  <------------CBF              --------->ARR11(3)        <---------ANAC58 ---------YAB1                  <---------ARR11(3)   <---------MYB52(1) -ANAC58              <---------ATHB12    <---------At5g28300      --------->ANAC46 -ANAC46            --------->WOX13(1)   <-----------GT1  <---------ANAC58 -ANAC58   ----------->GT1      <---------GLK1(2)<---------At5g28300               ----------->RAV1(2)   tttcgattgtaacatgaaaaatcaatcgattagagatttttaattacagtttaccgttttccgttcttcccaccattctgcgtccatctggattactctc  21581200                                         <---------TOE2(3)            ----------->GT1                                         <---------TOE1(3)           <---------WOX13(1)       <------                                   --------->ARR14(2)              <--------ATHB1--------->YAB1                                <---------ANAC58                   --------->ATHB12 <---------ICU4                                --------->ANAC55(2)               <---------YAB1 <--------HAHB4                    ------>ZmHOX2a(1) <---------AHL20(2)          --------->ICU4 <---------ICU4<-----                --------->ARR11(3) <---------ARR14(2)  --------->ANAC55(2)      --------->ICU4-------       --------->YAB1           <---------ANAC46       <---------ANAC55(2)      <---------YAB1<------       ----------->GT1          <---------ANAC58--------->ANAC46 <---------WOX13(1)<---------YAB1   gtaaatggatgataaaaacatcctgtttttttttgcgtattttaaggtatacagaatacttatcttgaatgattgttaaacgattattatggctaatttt  21581300  Previous    Next  AGI:  At3g58240.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G58270.2); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 21579507    to: 21580804    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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