Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->MYB46(3)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             <---------ARR11(3)       ------>MYB46(1)                                       --------->ARR11(3)       ------>MYB83                                          --------->AGP1     <---------MYB59                                --------->GLK1(1)     --------->TOE2(3)                       <---------ICU4  <---------ARR14(2) ---->LBD16                                  --------->YAB1  <---------AGP1 ----HSFB2a(2)     --------->MYB52(1)       <---------ATHB12 --------->ARR14(2)     ---------->DOF2-- --->HSFB2a(2)     <-----------GT1          --------->ICU4  <---------CCA1(2)     --------->MYB46(3)-   gatgaaacctaatctacaaattaacgagctcatgaaaacacatctaatcatcagatttcgctagatcttaacctccaaattctaaccaaagatgtgtttg  21554700                                                      --------->WOX13(1)                                             <-------TEIL                                          =================HOX2a_HOX2a      ------>ZmHOX2a(1)                                          <------ZmHOX2a(1)     <---------TOE2(3)                                       <---------HSFB2a(2)     <---------DOF5.7(2)                             <---------At4g35610    ===============================HOX2a_HOX2a                             --------->At4g35610    <------ZmHOX2a(2)     ------>ZmHOX2a(2)                  --------->WOX13(1)   --------->HSFC1(1)      <-----------GT1 -------->DOF2  <---------ATHB12       --------->HSFB2a(2)     --------->MYB52(1) -------->DAG2  --------->ICU4        --------------------->WRI1<---------TOE1(3)                 <--   aaaaagtagcgatttgaaatcattcaaggagagctaaccttctaggattcatcgatcaatcgaattaacgttttgatcctccaacgatgtctcgatttcg  21554800                            ====================================HOX2a_HOX2a                          <---------AGP1                          <---------ARR11(3)           <---------TOE1(3)                     ----------->RAV1(2)      --------->ANAC58            <---------HSFB2a(2)            ------->GAMYB            --------->HSFC1(1)            --------->MYB46(3)            --------->HSFB2a(2)<---------TOE2(3)       <---------TOE2(3)       ---------->DOF2           <---------LBD16<---------ARR14(2)  --------->ANAC58    ----------->GT1    <---------ARR11(3)    --------->ARR14(2)--------->MYB52(1) --------->MYB52(1)    --------->ARR11(3)   <---------CCA1(2)<---------MYB52(2)  <---------ARR14(2)        ---------->DOF2 --------DOF2--------->LBD16------>ZmHOX2a(2)------->TEIL<------ZmHOX2a(1)   --------->ETT(2)   cttcaagatgttttccagaattcacctggatctatggtttcacaacgaacgcaaattaaggaaggaaacggttgatatgtcgaaagaacagaaagctctg  21554900                                          --------->ANAC55(1)                                       <---------ARR14(2)                                       --------->ARR14(2)                                   ------->MYC4                                   <-------MYC4                                   <-------MYC3                                   <-------MYC2                                   ------->MYC2                                   ------->MYC3                                  --------->TGA1a                                  --------->ANAC55(2)                                  <---------O2--------->ANAC58                             <---------                                  --------->O2--------->ANAC58                           --------->AHL20(2)                                  <---------TGA1a   ----------->GT1                      <---------AHL20(2)                                  <---------ANAC55(2)                                    --------->AHL20(1)                                <---------ALFIN1   *TSS                                  <---------AHL20(1)                             --------->MYB46(3)  --------->MYB52(1)                     --------->AHL20(2)                        --------->ANAC58  --------->ANAC58                          ------------>CBF                        --------->ANAC58  --------->ANAC58                     <---------AHL20(2)                        --------->ANAC46  --------->ANAC46                    --------->AHL20(2)  <-----------GT1     --------->ZAT6 --------->REM1(2)                ----------->GT1   <---------ATHB12   tgtttatcgttcttaagcgaatcaacactcaacaacacgtgtatacgcaagtaatggataatagaaactatggggtcaaatttaaaatcaataaattgtt  21555000                                      <---------TOE1(2)                                      --------->LBD16                                  --------->PCF2                          --------->LBD16                           --------->GLK1(2)                         <---------HSFB2a(2)                       --------->ARR14(2)                         --------->HSFB2a(2)                       <---------GLK1(2)                         --------->ANAC46                  --------->ANAC58     ------>MYB46(1)     --------->ANAC55(2)               --------->ANAC58     ------>MYB83       <-----------------AGL1  ---------->ID1   ----------->ARR10   <---------MYB59<---------MYB52(1)<---------LBD16        --------->ANAC46                         -  ----------------->AGL3----------------->AGL1 <-----------GT1  --------->YAB1                      <  ----------------->AGL2<---------LBD16 <----------DOF2  <-----------GT1  *TSS<----------DOF2       - ---CBF         ----------->GT1  <-----------HVH21  <----------DOF2<---------ARR14(2)         -------   ttggaccaaatatagatttcgttatttccggaataggtcccgcgttttttttctctttttcacgaatcagattctcttctcttttgtatacaaaaaccct  21555100          <-----------HVH21        <------NtERF2       ------>NtERF2      <---------DEAR3(1)     --------->ZAT18     <------NtERF2     --------->ATERF1(1)    ------>NtERF2    <---------ATERF1(1)    <---------RRTF1(1)    <---------ORA47(2)    <---------RAP2.3(1)    <---------DEAR4(2)    <---------ERF1   --------->ANAC46   <---------RRTF1(3)                     <------NtERF2   <---------RAP2.3(3)                   ------>NtERF2   <---------RAP2.3(2)                  --------->DEAR3(1)   <---------DEAR3(1)      <---------ARR14(2)  <---------At4g35610  --------->ATERF1(1)      --------->ARR14(2)  --------->At4g35610 <---------ATERF1(1)       <---------ARR11(3)  <---------ZAT2                               <-------GAMYB -------->ETT(2)           <---------GLK1(2)  ------->TEIL                   <------ZmHOX2a(2) ---------WRKY38(1)  <---------SPL7    --------->RAP2.3(1)  --------->ARR14(2)             <---------MYB46(3) ---------->HVH21 <-----------HVH21  ------->GAMYB          <---------ARR14(2)     <-------TEIL -->TOE2(3)      --------->DEAR3(1)  --------->ANAC46  ----------->GT1 --------->MYB52(1)  ----------   agtcgacggcgctgttacaccgtcgtccagatttttcaaacgccgacgaagctgatttagtgaatatggaatctaatggatcagtttcatcgatggttaa  21555200                       <---------AtMYB61      <---------LBD16              <-----------HVH21         --------->MYB46(3)      --------->HSFC1(2)<------MYB83   --------->ANAC58      --------->HSFB2a(1)          --------->YAB1      <---------HSFB2a(1)        <-----------HVH21                                                  -     ----------->ARR10 --------->MYB55(2)  ------>MYB83                                             - <---------HSFB2a(2)   <---------MYB46(3)  ------>MYB46(1)                                     <----- --------->HSFB2a(2)--------->ATHB12 --------->MYB46(3)      <---------ZAT18--------->ANAC46<-------- ->GT1<---------HSFC1(2)<------MYB46(1)--------->ANAC58      <---------At4g35610     ---------->DOF2-   cttggagaagtttctctgtgagcgattggtggaccagtcacaaccaatctcggagcgatttagagctctcttctctcttcgcaacttgaaaggcccagga  21555300                                            <-----------ARR10                                            --------->ARR14(3)                                            <---------ARR14(3)                                            <---------ARR11(3)                                     --------->At4g35610                                     <---------At4g35610                               ----------->GT1      ------->GAMYB               --------->At4g35610                              --------->AHL20(1) -------->ANAC46                 <-----------RAV1(1)<----------DOF2       --------->HSFB2a(2)      -- -------->ANAC58            <-----------GT1 --------->GLK1(2)<---------AHL20(2)    <---------AHL20(2) -ZmHOX2a(1)     <---------TOE1(2)<---------At4g35610    --------->AHL20(2)        --------->AHL20(2) ---RAV1(2)   --------->ATHB12--------->ZAT6--------->ARR11(3)---------->DOF2     --------->AHL20(2) -------->ANAC58 <---------TOE2(2)<---------ZAT2  ---------->ID1          <---------HSFB2a(2)<-------   cctcgcaacgctctaatccttggtttgttttaacactgctgctcaaaatcttgtcttttttatataaagtctatttctacaaaaaaaaattgttactttg  21555400                        ------->TEIL                 <----------DOF2                                            ----------->GT1       <---------ARR11(3)                                            --------------->AGL15       --------->ARR11(3)                                            <---------------AGL15       --------->AHL20(1)                   <---------AHL20(2)      <-----------------AGL2   ---------->DOF2   <---------YAB1       <----------DOF2       <---------HSFC1(2) -------->DOF2  <-------GAMYB         <---------GLK1(2)         --------->HSFC1(2)    ---------->DOF2 ---DOF2--------->CCA1(2)           <---------YAB1        <----------DOF2  <---------TOE2(3)<--------   ggaaagaaagatattggcgcttgatgaatgtagaaactctgattcttttatttgtgttttctttgaagcttctgtataaggctaaattgaaagtctttgc  21555500                                                                           -------->HAHB4                                                                           --------->ATHB12                                                                           <---------ICU4                                                                           <--------ATHB1                                                                          --------->ICU4                                                                          <---------YAB1                     --------->ATHB12                                     <---------ATHB12                    <---------AHL20(2)                          <---------DAG2      <---------AHL20(2)            --------->ZAT6              <----------DOF2     --------->AHL20(2)<---------WOX13(1)                    <-----------GT1 <---------WOX13(1) --DOF2    <---------At4g35610------->TEIL        <-----------GT1        <---------TOE2(3)        <--   agtttgattttatagctgctatttgattgatgcacctaaaactacatacaagtttccacatttttacttttagttaatgattgaacagagcttcttcaag  21555600  Previous    Next  AGI:  At3g58170.1    Description:  ATBS14A; protein transporter. Identical to Bet1-like SNARE 1-1 (BET11) [Arabidopsis Thaliana] (GB:Q9M2J9); similar to ATBET12, SNAP receptor/ protein transporter [Arabidopsis thaliana] (TAIR:AT4G14455.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70685.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727) Range:  from: 21553336    to: 21554951    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g58180.1    Description:  PBS lyase HEAT-like repeat-containing protein. Identical to Deoxyhypusine hydroxylase [Arabidopsis Thaliana] (GB:Q94JW0;GB:Q9M2J8); similar to PBS lyase HEAT-like repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G62530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70690.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain PBS lyase HEAT-like repeat (InterPro:IPR004155); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 21555074    to: 21557157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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