Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ARR11(3)                           <---------ARR11(3)        ------>ZmHOX2a(2)                         --------->ANAC58          <---------ARR14(2)                         --------->ANAC58     <---------At4g35610                  <---------AtLEC2            <---------ZAT2                                  ------>ZmHOX2a(2)                  <---------ANAC58            --------->ZAT2                                  =======                  <---------ANAC58            --------->At4g35610 <----------DOF2         -----------                 <<<<<<<<<<FUS3      --------->At4g35610     <<<<<<<<<TBF1              <---------At4g35610                 <<<<<<<<<<ABI3      <---------At4g35610  <<<<<<<<<TBF1                 ----------->RAV1(2) ----ARR11(3) --------->CCA1(2)      <---------ZAT2--------->ARR14(2)                   --------->At4g35610 --->ARR11(3)--------->ARR14(2)      --------->ZAT2--------->ARR11(3)            --------->ZAT14 >DOF2     <---------TOE2(3)      <---------ZAT18  <---------ARR11(3)            --------->ARR14(2)   gttagcccaatttgagatttgcatggcaagctcttgtgcagctctctcagctcgatcttcttcttcttctttttcatcgatggtatactcatctgatcga  21510300                                                            <----------DOF2                    <-----                                <-----------RAV1(1)--------------->AtSPL8                      <-----                                <---------ZAT6   <---------ANAC58                          --------->ARR14(2)                        <------ZmHOX2a(1)        <---------ANAC58                    --------->DAG2 ==============================HOX2a_HOX2a       <---------ANAC46                   ---------->DOF2 >HVH21             ---------->DOF2           <----------DOF2              ---------->DOF2 <---------ARR14(2)   gctaagaaactttctacttcttcaaaggattttagtgttgccaattgtctttcgtagtactccttttcatcttcaaaaaaagaagaaaaagcatatttgg  21510400                                <---------ANAC55(2)                           --------->YAB1                        <---------ZAT2                           <---------ICU4                        --------->At4g35610                           -------->ATHB1                        <---------At4g35610                          <---------AHL20(2)                  <---------ZAT2                          --------->AHL20(2)               <---------ANAC58                 <---------YAB1 ----------->GT1            <---------ANAC58         ------------>AtMYB77<---------YAB1               ------>NtERF2 -MYB46(1)   <-------GAMYB--------->ICU4            <----------DOF2<----------DOF2             <----- -MYB83 ----------->HVH21 <---------ATHB51   <-----------GT1  <---------At4g35610   <-------TEIL<----   tttagtagttgtgacagttattatctaaattattatgtaaaacatagataccttctttgaggcctgcagctttggagacatcaaggtgcaaagggttctc  21510500                                      ----------->ARR10                                  --------->LBD16                                  <---------HSFB2a(2)                                <---------LBD16                              --------->ARR14(2)                             --------->GLK1(1)                         <---------MYB52(1)  ------>ZmHOX2a(2)          <---------GLK1(1)                    --------->MYB52(1) ----LBD16              <---------TOE2(3)                      --------->AtMYB61                    < -----LBD16  ------>ZmHOX2a(2)<---------ARR14(2)            <-----------GT1 <----------DOF2         -   gggatcgatttttgatcgaagtttttgaggcaaatccgcgaagaaattcgatttcatagaagaaaccataccggttaactttggtttgtgatcaatagcc  21510600                                                                --------->AHL20(2)                                                               <---------YAB1                                                             -------->ATHB1                                               --------------->AGL15                                               <---------------AGL15                                              <-----------------AGL3                                              ----------------->AGL2                                              ----------------->AGL1                                     -------->ATHB1          <---------ICU4                                     <---------ICU4         --------->ICU4                                     <--------ATHB1         <---------AHL20(2)                                     --------->YAB1         --------->AHL20(1)                                     --------->ATHB12       --------->AHL20(2)                                     --------->ATHB51 --------->LBD16                                    <---------ATHB51 <---------HSFC1(1)                              --------->LBD16 ----------------->AGL3                             <---------HSFB2a(2)     --------->HSFB2a(2)                          <---------ARR14(2)  <-----------------AGL1                  --------->MYB52(1)--------->ICU4   --------->HSFC1(1)             ---------->DOF2 --------->HSFB2a(2)  --------->ARR14(2)          <---------TOE2(3) <---------LBD16   <-----------------AGL2                            -----        ----------->HVH21 --------->ARR14(2)  ----------------->AG          --------->TOE1(1)   -----    ------>ZmHOX2a(2)  --------->ALFIN1<---------WOX13(1)   <---------YAB1  --------->TOE2(1)   <----  <---------ARR11(3) ------->GAMYB  <---------ATHB12 <---------HSFB2a(2)   --------------->AtSPL8   - ---------YAB1 --------->ANAC58     <---------YAB1<---------ARR14(2)     --------->YAB1         <---- -------->ICU4 --------->ANAC58  ------------>ATHB5 <---------LBD16     <---------ATHB12       ------   tcatgatcgtttgacgaaagcaacggtgtttccggacaataattgacttccatttctggaaaattattaaacaaatcatcgtacaaaaaaaacatgaata  21510700                                             --------->AHL20(2)          <---------GLK1(2)              <---------AHL20(2)       --------->HSFB2a(2)           <---------ICU4       <---------HSFB2a(2)           <--------HAHB4                                       --------->GLK1(2) <-----------GT1                     --------->YAB1                 <----------TaMYB80<------ZmHOX2a(1) ---->AHL20(2)                       --------->ATHB51<---------AHL20(2)              --------->LBD16 ---->AHL20(1)                      --------->AHL20(2)          ----------->GT1    <-----------RAV1(2) -----AHL20(1)                      --------->ICU4  --------->AHL20(2)             <---------LBD16 <- -------->AHL20(2)                --------->YAB1 <---------------AGL15        <---------ARR11(3)   <- -----AHL20(2)         <---------GLK1(1)--------->AHL20(2)     --------->DAG2 --------->ARR11(3) <--- --->AHL20(2)          --------->GLK1(1)<---------AHL20(2)    ---------->DOF2--------->YAB1  <-------   aattaactactagaatttgaaggggaaacccccttagaataattaaataaactattaaatgaaaaaaagtatataccgatgatattcaggagaattttta  21510800                                                                                        <------------CBF                                                                                       --------->ATHB12                                     <---------REM1(2)                                <-------TEIL                                     --------->ZAT14                               <---------ANAC58                                     --------->ZAT18                               <---------ANAC58                                <------------CBF                                  <-------TEIL     <---------At4g35610     <---------TOE2(3)                              <---------AHL20(2)   <-----------RAV1(2)     ---------->DOF2           <---------YAB1     <---------RVE1(1) --------ANAC58           --------->CCA1(2)     <------MYB46(1)         <---------CCA1(1) --------ANAC58          --------->ARR11(3)  <------------CBF          --------->ARR11(3) ------YAB1          ---------->DOF2 <---------ZAT14<-----------TBP    <---------ARR11(3)           < --AHL20(2)    ---------->DOF2 <------ZmHOX2a(1)<------MYB83           <---------AHL20(1)           -   tgcttgcaggtgatgaacaaagaaaaagataaaggattgtacacagagattggtttttatagatagattataagatattttatgtgcgttcattgaattt  21510900                --------->ATHB51                <---------ICU4                -------->ATHB1               --------->ICU4               <---------AHL20(2)            --------->AHL20(2)            --------->AHL20(1)                         --------->YAB1            <---------AHL20(1)                        <---------YAB1            <---------AHL20(2)                        --------->ICU4                       ----------           --------->AHL20(2)                       --------->YAB1                     --------->ANAC58           <---------AHL20(2)                      --------->ICU4                      --------->AtLEC2        <---------AHL20(2)                       --------->YAB1                        --------->ANAC58       <---------AHL20(2)                       --------->ICU4                        <-------MYC2       --------->AHL20(2)                       <---------YAB1                        ------->MYC2  <-------GAMYB--------->AHL20(2)             --------->YAB1                          <-------MYC3 <---------MYB46(3)          --------->YAB1  --------->ICU4                           ------->MYC3 ----------->GT1--------->ATHB12             <---------YAB1                        <---------ALFIN1 ---------TOE2(3)<------------CBF         --------->ICU4 <---------YAB1      <---------ANAC58-------- --------->ID1 <---------ATHB51 --------->AHL20(2) <---------YAB1            <---------ANAC58--------   ttgtggttatttattaaattattgtatggaataagaaaatagagatgatgatgatgatgatgatagagacagccctggtacttgcccacatgcaaaagca  21511000                                              ----------->HVH21                                              ----------->TGA1                                             --------->LBD16                                            <---------ANAC58                                            --------->ANAC55(2)                                            <---------ANAC55(1)                                            <---------ANAC58                 --------->TOE2(3)                                            <---------ANAC46                 --------->YAB1                                 <---------HSFC1(2)                         <<<<<<<<<ARR2                                 --------->HSFC1(2)                <-------TEIL                                 <---------HSFB2a(1)            <---------ANAC58                  ---                               <------ZmHOX2a(1)                <---------ANAC58                  <--      <---------ANAC58        <---------At4g35610        <---------------AGL15     <---------AHL20(2)  ---------->DOF2           <-----------RAV1(2)          ============================================MADS_MADS >DOF2<---------ANAC58--------->TOE2(3)     <---------ANAC55(2)<---------------AtSPL8--------------->AGL15 ->ANAC58       ------>ZmHOX2a(2)--------->HSFB2a(1)  <---------AHL20(2)    <<<<<<<<<ARR1         --- ->ANAC58       ======================HOX2a_HOX2a    --------->AHL20(2)    --------->GLK1(2)      ---   tcaacaaagcttgtctgatccatgccttagtcaggagcttcttgttccgtgacgattttatattttgggtacatgacaatcttattttcttatttagaaa  21511100           <---------ZAT14    ------->MYC2    <-------MYC4    <-------MYC3    ------->MYC3    ------->MYC4    <-------MYC2   <---------TGA1a   --------->ANAC55(2)   <--------ABF1   <---------ANAC55(2)   <---------O2   <---------ANAC46   --------->O2   =====================================bZIP_DOF   --------->TGA1a           ---------->DOF2                            --------->YAB1            --- ------>ANAC46        <---------YAB1     --------->ARR11(3)        <---------YAB1        <----------DOF2 --------ID1 <---------At5g28300         <---------ARR11(3)--------->TOE2(3)           <---------ZAT18 ------>ANAC58    --------->ZAT14       --------->YAB1  <---------ARR14(2)      ====================bZIP_DOF ------>ANAC58    <---------ZAT14--------->YAB1         --------->ARR14(2)      --------->TGA1a   ---   acgacacgtgtagtttacagtgttgtaattgcaaagcataaatgatattcaacattcggaaccctaattttgaataatgctcacatcagcgcgtttcgac  21511200  Previous    Next  AGI:  At3g58060.1    Description:  cation efflux family protein / metal tolerance protein, putative (MTPc3). similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT1G79520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23420.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 21508755    to: 21510653    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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