Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->MYB46(3)                                      --------->AHL20(2)        <---------At5g28300                                   <---------ANAC55(2)         <-----------GT1                     --------->ARR14(2)               <------MYB46(1)     --------->ANAC46<---------ARR14(2)               <------MYB83 --------->At4g35610    <---------At4g35610     ----------->RAV1(2)      --------->MYB59                     <----------DOF2    --------->At4g35610    ------->TEIL              <---------MYB46(3)           <-----------GT1  ---------->CDC5<---------LBD16  <-------TEIL     <---------MYB52(1)          <---------ICU4       <   ttgttcagcgcaagtgaaacctggatttgaacctgatacataaatttgttatcgtttggtcattttaaccgctccctctaatatttacctcctttttata  21503100                                                                                      <---------GLK1(2)                                                                                      <---------CCA1(2)                                                                                      <---------ARR14(1)                                                                                <---------ATERF1(1)                                                                                --------->ZAT2                                                                                <---------At4g35610                                                                                ------>NtERF2                                                                                <---------ZAT2                                                                                --------->At4g35610                                                                               --------->DEAR3(1)                                                                     <---------AHL20(2)------->TEIL                                                                     --------->AHL20(2)--------->ARR14(2)                                                                     --------->ARR11(3)<---------ARR14(2)                                                                     <---------AHL20(1)<-----------ARR10                                                                     <---------ARR11(3)<---------ARR11(1)                                                                     --------->AHL20(1)--------->GLK1(2)                                                               <---------HSFB2a(2) --------->LBD16                <---------ARR11(3)                             --------->HSFB2a(2) ------>NtERF2                --------->ARR11(3)                             --------->HSFC1(1) --------->RAP2.6(2)             --------->ANAC55(2)                               <---------HSFC1(1)--------->ATERF1(1)        <----------DOF2                                    <----------DOF2    --------->ATERF1(1) -----------GT1<---------CCA1(2)                       <----------DOF2      --------->ANAC46   <-----   agttacacatcttttacatatctctctctctctctctctctctctctctctctctctctttctttctagaatatattgacgcagccgcgaatctcatcgt  21503200                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                          ------>MYB46(1)                                                                                    ----------->HVH21                                                                                  <---------At4g35610                                                                                  <------ZmHOX2a(2)                                                                                  --------->At4g35610                                                                                 <---------AGP1<-----                                                                                 <---------ARR11(3)                                                                                 --------->GLK1(2)                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                             <---------RAP2.6(2)                                 --------->ARR11(3)                             <---------RAP2.3(2)                                 <-----------ARR10                            <---------LBD16       ------------>CBF              <------ZmHOX2a(1)                 --------->ARR14(2)              --------->TOE2(3)           <XXXXXXXXXXXXXXXXXXXXMIR842 <-----------TGA1<---------ARR14(2)         ------------>CBF             <-------GAMYB    ------>MYB83 <-----------HVH21     --------->ATHB12   <----------DOF2   <-------TEIL<-----------RAV1(1)    ------ ------TGA1     <------ZmHOX2a(1)<----------DOF2 --------->YAB1     <----------DOF2------>ZmHOX2a(2)<   catcgtcatcgaccaagaggaaccctgatttgcggcttttcttcctttcaatctcaattcgattcgttttctttctgttgaaggatctgaccatccagat  21503300    --------->LBD16   --------->LBD16                                          --------->LBD16  <---------LBD16                                      <---------GLK1(1)  --------->LBD16                                      --------->GLK1(1)            <---------WOX13(1) <---------LBD16                                    --------->LBD16                <---------ANAC58 ----GLK1(2)                                       --------->HSFC1(1)              <---------ANAC58 ------ARR10--------->YAB1                         --------->HSFB2a(2)             <------------CBF ----ARR11(3)                               --------->AHL20(2)                    --------->ATHB12 --->ARR14(2)                               <---------AHL20(1)                   <---------YAB1 ----ARR14(2)                               <---------AHL20(2)  <-------TEIL  <---------MYB46(3) --->ARR11(3)     --------->YAB1   <-----------GT1 <---------HSFB2a(2)      <------------CBF ---------LBD16<---------ICU4 <----------DOF2      <---------HSFC1(1)    <------ZmHOX2a(2)          <   tttcccgggaaatttcataatcagactcttctctttttatcttcattttatttccagaaatcccgattcatcgcgatcgattgttgattgctgtatttct  21503400                                                               <-------GAMYB                                                              <---------MYB46(3)                                                   >>>>>>>>>ARR2                       <---------MYB46(3)               <-----------TBP           --------->ARR14(2)   <-----------RAV1(1)     <---------WOX13(1)          ---------->ID1                 <---------ARR14(2)   --------->MYB52(2) <------------CBF         <------MYB83           --------->ANAC55(2)>>>>>>>>>ARR1                --------->ATHB12         <------MYB46(1)        --------->ANAC58   >>>>>>>>>ARR2              <<<<<<<<<<<<<<<<<LFY        <---------AtMYB61       --------->ANAC46   >>>>>>>>>ARR1           --------->YAB1     --------->ARR14(2)         --------->ANAC58   <------------CBF       <---------YAB1  <---------YAB1     <---------ARR14(2)        <---------LBD16    <------ZmHOX2a(1)     <---------ICU4<--------P  --- ------------CBF              <-----------GT1 <---------MYB52(1) <---------MYB46(3) <---------MYB46(3)   ccgattggatttggtgtttttgtagtccgatttcacggacttgaatccgataggattgttttgtttgttgttgataatgaaaacattggttgatgaatac  21503500                             --------->At4g35610                 --------->LBD16                                       --------->GLK1(1)       <-----                 ------>NtERF2                                  <---------WRKY45               ------                <---------ANAC58    <---------ICU4              <---------WRKY12               ------                <---------ANAC58    --------->YAB1              <---------WRKY38(1)       --------->YAB1                <---------ANAC46   --------->ICU4              --------->WRKY18(1)    XXXXXXXXXXXXXXX          <---------ATHB12--------->ZAT14                     <-----------HVH21      --------->At4g35610     --------->At5g28300  <---------ZAT14               <---------ANAC58             <---------At4g35610    ----------->GT1       --------->ZAT18               <---------ANAC58         <-----------HVH21 ------>ANAC46 <---------LBD16  <------ZmHOX2a(1) <----------DOF2---------->DOF2<---------bZIP60(1)   aagagactgtaaatgatgccgggtttagcgcagaggaataatgaccaatactcttttggcttctggtcaaaggaaatcgatggtgtcagctataatcagc  21503600         <---------DAG2         <---------MYB59         --------->TOE2(3)   --------------->AtSPL8   --------->DAG2   --------------->AtSPL3   <---------------AtSPL3                          <---------WOX13(1)       <---------YAB1 ---------->DOF2                                <---------AHL20(2)        <----------DOF2 ----At4g35610                                  --------->AHL20(2)       <---------ANAC58        >>>> --->At4g35610        <---------MYB46(3)      <----------DOF2            <---------ANAC58     ------- --->ZAT2--------->TOE1(3)        <---------At4g35610           --------->ARR11(3)            <------ XXXXX>MIR864-5P----------->RAV1(1)     <-------TEIL            <---------ARR11(3)    --------->WOX13(1)   tccaaaaggtaccttatcccacattggttctcttgcctctgattcattctttaattgctgtttagagatgtttttgctttcattgtatcaatccaagttc  21503700                                                                                               ------                                                                                      <---------ANAC46                                                                                      <---------ANAC58       ------>ZmHOX2a(2)                                                              <---------ANAC58      <------ZmHOX2a(2)                                                            --------->HSFB2a(2)     <-----------ARR10                     --------->TOE2(3)                       <---------HSFB2a(2)     --------->ARR14(2)                   --------->ATHB12                        <---------LBD16     <---------ARR11(3)                   -------->ATHB1                        <---------ARR14(2)     <---------ARR14(2)                   --------->YAB1                        --------->ARR14(2)     <---------AGP1                       <--------HAHB4                    <---------ZAT18   <------     --------->ARR11(3)                   <---------ICU4                    --------->ZAT18<---------At4g35610     --------->AGP1                      <---------ATHB12                   --------->ZAT14--------->At4g35610    <---------CCA1(2)          ----------->TGA1                             <---------ZAT14--------->ZAT2 >>>ZML2                 <---------At4g35610                             <---------ANAC46  <---------ZAT2 -->ARR11(3)             --------->At4g35610       ---------->DOF2       <---------ANAC58--------->ZAT18 ---ARR11(3)            ------->TEIL    ------->TEIL                     <---------ANAC58<---------ZAT14   tagttcagatcttattcacatatatgtagctaaatgacgatgaatcattaactcaaagcacattgttctgaacttgtgtgcagttctggagtgagctgtc  21503800                                                                                                    -                                                                                                    <                          <---------WOX13(1)                                                       <-               <---------GLK1(1)                                                          <---------At4g35610               --------->GLK1(1)                                                <-------TEIL   ------   --------->ANAC58    <---------YAB1                                        <---------At4g35610   <-   --------->ANAC58    <---------TOE2(3)            <---------ZAT2           --------->At4g35610   <- ---------->DOF2    ------>ZmHOX2a(1)              --------->ANAC58        --------->HSFB2a(2) <----- ----->HVH21  --------->ARR14(2)       <----------DOF2                     <---------HSFB2a(2) ------ -----HVH21  <------ZmHOX2a(1)  --------->MYB52(1) --------->ANAC58        <-----------RAV1(2) <-----   accgaaagctaggcaggaactccttaagattgacaaacagactttgtttgagcaagctcgtaagaacatgtattgttccagatgcaatggtctgcttctc  21503900            <---------GLK1(2)     <---------ANAC58     <---------ANAC58                                     --------->ARR14(2)     <---------ANAC46                            <--------HAHB4    --------->MYB52(2)                           --------->ATHB12                    ------>ZmHOX2a(2) -------->HSFB2a(1)                             <---------YAB1                      <------ZmHOX2a(2) ---------HSFB2a(1)                      --------->LBD16  --------->GLK1(1)        --------->ARR14(2) --------TOE1(3)                        --------->HSFB2a(2)            --------->MYB46(3) --->HSFB2a(2)                          <---------HSFB2a(2)          ----------->RAV1(1) --------TOE1(2)                 ------>ZmHOX2a(1)        <---------GLK1(1)<---------ATHB12 --------TOE2(2)                <---------ANAC58<------ZmHOX2a(2)    ===================RAV       <-- ----HSFB2a(2)                  <---------ANAC58--------->ICU4<---------YAB1       <---------ARR14(2) --->HSFC1(1)        <---------AtLEC2  <---------LBD16    <---------ARR14(2)<-----------RAV1(2) <---- ----HSFC1(1)      <---------YAB1======================HOX2a_HOX2a--------->AtLEC2--------->GLK1(1)   gaaggtttcttgcagattgttatgcatgggaagtccttgcatccggagggatcattagggaattctccttgcaacaaatcagggggatccaaatatcaat  21504000  Previous    Next  AGI:  At3g58050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23422.1); similar to hypothetical protein OsI_010342 [Oryza sativa (indica cultivar-group)] (GB:EAY89109.1); similar to Os03g0226600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049440.1) Range:  from: 21503516    to: 21508134    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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