Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->LBD16                                       <---------TOE2(3)             <---   --------->At4g35610                                             <---------TOE1(3)         --------   <---------At4g35610                                            <---------DOF5.7(2)        <------- -------->HVH21                                          <----------DOF2     <----------DOF2 <------- ------>ANAC58             <---------ICU4      ------->PIF5     --------->DOF5.7(2)          -------- ------>ANAC58       --------->AtLEC2          <-------PIF5    <----------DOF2            <---------ZAT6 ---->CCA1(2)------>NtERF2<---------ATHB12   <---------LBD16  --------->TOE2(3)  ---------->ID1  <---   acgacagctaatagccgcgtttcatccaaacatttcaaaacactttccacgggcttcttcttttcctttaacgtttgggctttggcccattagagttcac  21459900                                                                                            <-------- ------DAG2                                                                           --------->At4g35610 ->ZAT14                                                                           <---------At4g35610 --ZAT14                                                                         --------->REM1(1) --ZAT18                              --------->AHL20(2)  --------->YAB1        <-------TEIL--------- ->ZAT18                              --------->YAB1      <---------ICU4     --------->At4g35610 -------DOF2                       --------->YAB1       <---------ARR11(3)   <---------At4g35610   <-   tttatttgttatctctctattctctctatctatatactaataatattctatatgtcaaaatcatcacattttgtaattcagcttcatcagctatataaat  21460000                                                     <---------At4g35610                                                     --------->At4g35610                                                   <-----------GT1                                                 <-----------HVH21                                            --------->ARR11(3)    <-------TEIL                           <------ZmHOX2a(1)     <---------MYB52(2)   <-----------GT1                       <---------TOE2(3)     --------->ZAT6 -AHL20(2)                             <XXXXXXXXXXXXXXXXXXXXXMIR447A/B >AHL20(2)                             <XXXXXXXXXXXXXXXXXXXXXMIR447C --------->MYB46(3)---------->DOF2 --------TOE2(3)                       ---------->DOF2        --------->MYB46(3)  -------------------   tgaagttacatcgcttcaaaattgttttcaaaaacattcaacaaaggattttgtcaccagactcaccactaacaactacaaaaaaaactaaaagagagag  21460100                                                                 <---------DAG2                ------>NtERF2                                    <----------DOF2               --------->LBD16                               --------->ZAT18              <---------LBD16                                <---------ZAT18     <---------AHL20(2)              --------->LBD16                                <---------ZAT14    --------->AHL20(2)    <---------YAB1       <----------DOF2  <---------YAB1     --------->ZAT14    <-----------TBP ----->ANAC81<---------LBD16         <----------DOF2      <---------ZAT6 ------->TEIL   acacatatgattcttcccgggcttcttcttttactgggccttttatgcttatgcccattagagttcactttattgaacccgattttatatgaatagtggc  21460200                                                                  ---------->DOF2                                                                 <---------WRKY12                                                                 <---------WRKY38(1)                                                                 <---------WRKY45                                                               <-----------HVH21                                                              <----------ID1                                                             --------->DAG2       --------->ATHB51                                   <-------TEIL        <---------------------WRI1 <---------ICU4                                --------->ATHB12      <------ZmHOX2a(1)          --------->ICU4                           <---------YAB1<------------CBF   --------->DAG2       <---------YAB1                        <---------MYB52(1)           <----------ID1    ----------->GT1 <-----------GT1       <-------GAMYB    --------->ATHB12   ---------->DOF2 *TSS--------->YAB1   -----   attaaaccatttcggtctagtactcggttatgaatgattcattcattgagtaagaaggacaaaaaggtcaaagcagaaaaatcataatttcttcggtcct  21460300                                             ------>ZmHOX2a(1)                                            <---------ANAC58                                            <---------ANAC58                                        --------->ABI4(2)                                        <---------MYB46(3)                                       --------->ALFIN1                                       <---------AtMYB61                                      <---------MYB52(1)   <---------AHL20(2)                --------     --------->ANAC46                --------->LBD16      <---------AHL20(2)                 -------- ->ZmHOX2a(1)                      <---------LBD16   <---------AHL20(2)                    --------->MYB52(1)   aaaccctactcaacaatttagaaaccctaagttctgttccggtggtccttgttatttttttttattttggtgttgttcttaaaattcagttccaaacgga  21460400                         <-----------GT1                  <---------ANAC46                  <---------ANAC58               <---------MYB52(1)              <-------GAMYB              <---------At4g35610              --------->At4g35610           <---------ARR14(2)              <---------ZAT2     <<<<<<<<<TAC1             --------->MYB52(2)<---------ALFIN1             <---------MYB46(3)--------->ZAT6     <---------CCA1(2)           <---------MYB52(1) ------>MYB46(1)  ----------------->AGL3 --------->ATHB12 <---------ANAC58   ---------->DOF2     <---------YAB1 ->ANAC58 <-----------TGA1    ------>MYB83  --------->ARR14(2) ->ANAC58 <-----------HVH21   -------->P--------->At4g35610   <---------AHL20(2)   aattgatttcttcgtcagttgcgttttttaccaacactcgaaagcagaacccatattttgttattgaatttgggtttttttttgtctgtgttaagaagat  21460500                                      <------ZmHOX2a(1)                    --------->MYB52(1)                 --------->ARR11(3) <---------TOE2(3)               --------->ATHB12           >>>>>>>>>TBF1    <---------ANAC58         ------->TEIL  <---------YAB1       <------ZmHOX2a(1)    <---------ANAC46   <-------TEIL   <------ZmHOX2a(1)  <-----------HVH21    <------ZmHOX2a(1)       <---------ANAC58  <--------P ------->TEIL <---------WOX13(1)   taagtaggaggaagaagaagagctagttttgcgagaatgaggaagaaggttgatgaacgtatcaggactctgattgaaaacggtgtcaaattgagacacc  21460600                               ----------->HVH21                             <---------ANAC55(2)                        --------->ANAC58  --------->HSFB2a(2)                        --------->ANAC58  --------->HSFC1(1)                   ----------->HVH21  <---------GLK1(2)                   <----------ARF1 <-----------RAV1(2)             -------->ATHB1  --------->ANAC55(2)             --------->YAB1  <---------O2 <---------HSFB2a(2)             <---------ICU4  <---------TGA1a             --------->ATHB12--------->TGA1a            <---------ATHB12 <---------ANAC58                   --------->ANAC55(2)                 <            <---------YAB1   <---------ANAC58      ----------------------->TaNAC69(2)               -            --------->ICU4   --------->O2 <---------HSFC1(1)    <---------ANAC55(2)    <-----------RAV1(1)   gttccatgtttgtaatcattggtgacaagtctcgtgaccaggttctcgaaagttttctacttggacacttatctccctgagagaatgttttgttggatac  21460700                                                                    <---------AHL20(2)                                                                   <---------AHL20(2)    <---------AtMYB61                                                               --------->ICU4            --------->ALFIN1          <----------DOF2                                     <-------GAMYB            <---------ANAC46         --------->TOE2(3)                             ---------->DOF2               <-------GAMYB         <---------DAG2             ------->TEIL<-----------RAV1(1)--------->AHL20(2)<---------ZAT14 ---------ARR11(3)                <---------ZAT18   <-----------HVH21               --------->ALFIN1- -------->ARR11(3)     ----------->HVH21    --------->YAB1   ----------->GT1        <-----------RAV1(1)   taaatcttcaaccttttttttttctctaacagatagtgaacctccatcatatgttgtcaaaggcagttattaaatgtaatccgagtgtgttgtggtgcta  21460800  Previous    Next  AGI:  At3g57940.1    Description:  Identical to UPF0202 protein At3g57940 [Arabidopsis Thaliana] (GB:Q9M2Q4;GB:Q0WNS9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10490.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ67800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71748.1); similar to N-acetyltransferase 10 [Danio rerio] (GB:CAN88420.1); contains InterPro domain Region of unknown function DUF1726 (InterPro:IPR013562) Range:  from: 21460275    to: 21466938    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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